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Aliases for AMD1P4 Gene

Subcategory (RNA class) for AMD1P4 Gene

lncRNA

Aliases for AMD1P4 Gene

  • Adenosylmethionine Decarboxylase 1 Pseudogene 4 2 3 5

External Ids for AMD1P4 Gene

ORGUL Members for AMD1P4 Gene

Summaries for AMD1P4 Gene

GeneCards Summary for AMD1P4 Gene

AMD1P4 (Adenosylmethionine Decarboxylase 1 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for AMD1P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AMD1P4 Gene

Genomics for AMD1P4 Gene

GeneHancer (GH) Regulatory Elements for AMD1P4 Gene

Promoters and enhancers for AMD1P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I011809 Enhancer 1 Ensembl ENCODE 7 +52.8 52822 2.1 ATF1 NFIB ZSCAN4 ZNF133 KLF17 ZNF76 FEZF1 BRCA1 YY1 RFX5 ENSG00000234427 ADTRP AMD1P4 GC06M011802 GC06P011785
GH06I011813 Enhancer 0.4 ENCODE 5.1 +48.0 48038 2.3 SP1 GATA3 PKNOX1 ADTRP AMD1P4 ENSG00000234427 GC06M011802 GC06P011838 GC06P011785
GH06I011854 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +8.2 8169 1.2 JUN BACH1 BATF RAD21 ZNF316 GATA3 NFE2 FOS IKZF2 RUNX3 HIVEP1 TMEM170B AMD1P4 GC06M011802 GC06P011785
GH06I011865 Enhancer 0.3 ENCODE 0.8 -3.1 -3111 0.6 FOS AMD1P4 LOC102724379 GC06P011785
GH06I011847 Enhancer 0.6 dbSUPER 0.4 +14.8 14815 1.8 ZBTB21 KLF5 ATF2 ZNF664 ZNF280A ZFP36 TRIM24 RUNX3 TRIM28 GC06M011802 AMD1P4 GC06P011785
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around AMD1P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for AMD1P4 Gene

Genomic Locations for AMD1P4 Gene
chr6:11,861,626-11,862,970
(GRCh38/hg38)
Size:
1,345 bases
Orientation:
Minus strand
chr6:11,861,859-11,863,203
(GRCh37/hg19)

Genomic View for AMD1P4 Gene

Genes around AMD1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AMD1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AMD1P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AMD1P4 Gene

Proteins for AMD1P4 Gene

Post-translational modifications for AMD1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AMD1P4 Gene

Domains & Families for AMD1P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AMD1P4 Gene

Function for AMD1P4 Gene

Phenotypes From GWAS Catalog for AMD1P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AMD1P4 Gene

Localization for AMD1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AMD1P4 Gene

Pathways & Interactions for AMD1P4 Gene

SuperPathways for AMD1P4 Gene

No Data Available

Interacting Proteins for AMD1P4 Gene

Gene Ontology (GO) - Biological Process for AMD1P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AMD1P4 Gene

Drugs & Compounds for AMD1P4 Gene

No Compound Related Data Available

Transcripts for AMD1P4 Gene

mRNA/cDNA for AMD1P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AMD1P4 Gene

No ASD Table

Relevant External Links for AMD1P4 Gene

GeneLoc Exon Structure for
AMD1P4
ECgene alternative splicing isoforms for
AMD1P4

Expression for AMD1P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of AMD1P4 Gene:

AMD1P4
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for AMD1P4 Gene

Orthologs for AMD1P4 Gene

Evolution for AMD1P4 Gene

ENSEMBL:
Gene Tree for AMD1P4 (if available)
TreeFam:
Gene Tree for AMD1P4 (if available)

No data available for Orthologs for AMD1P4 Gene

Paralogs for AMD1P4 Gene

No data available for Paralogs for AMD1P4 Gene

Variants for AMD1P4 Gene

Additional Variant Information for AMD1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AMD1P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for AMD1P4 Gene

Disorders for AMD1P4 Gene

No disorders were found for AMD1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AMD1P4 Gene

Publications for AMD1P4 Gene

No publications were found for AMD1P4 Gene.

Products for AMD1P4 Gene

Sources for AMD1P4 Gene

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