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Aliases & Descriptions for AMBP
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EDC1 1, 2 | | HCP 1, 2, 3, 5 | | HI30 1, 2 | | IATIL 1, 2 | | ITI 2, 5 | | ITIL 2, 3, 5 | | ITILC 1, 2 | | OTTHUMP00000021967 2 | | OTTHUMP00000063975 2 | | UTI 1, 2 | | alpha-1-microglobulin/bikunin 2 | | bikunin 2 | | trypstatin 2 | | uristatin 2 |
| | | Descriptions |
|---|
| alpha-1-microglobulin/bikunin precursor 2 | | complex-forming glycoprotein heterogeneous in charge 2 | | growth-inhibiting protein 19 2 | | inter-alpha-trypsin inhibitor light chain 2 | | protein HC 2 | | uronic-acid-rich protein 2 |
|
| | Search outside databases for aliases for AMBP genePrevious GC identifers: GC09M107620 GC09M108554 GC09M110276 GC09M112198 GC09M113901 |
Summaries for AMBP(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for AMBP: This gene encodes a complex glycoprotein secreted in plasma. The precursor is proteolytically processed into distinct functioning proteins: alpha-1-microglobulin, which belongs to the superfamily of lipocalin transport proteins and may play a role in the regulation of inflammatory processes, and bikunin, which is a urinary trypsin inhibitor belonging to the superfamily of Kunitz-type protease inhibitors and plays an important role in many physiological and pathological processes. This gene is located on chromosome 9 in a cluster of lipocalin genes. [provided by RefSeq] UniProtKB/Swiss-Prot: AMBP_HUMAN, P02760Function: Trypstatin is a trypsin inhibitor (By similarity)Gene Wiki entry for AMBP (Alpha-1-microglobulin/bikunin_precursor) |
Genomic Location for AMBP
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the AMBP gene 
Entrez Gene cytogenetic band: 9q32-q33 Ensembl cytogenetic band: 9q32 HGNC cytogenetic band: 9q32-q33AMBP Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 9 GeneLoc Exon Structure GeneLoc location for GC09M115862:
(about GC identifiers)
Start:
|
115,862,228 bp from pter |
End:
|
115,880,536 bp from pter |
Size:
|
18,309 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000009.10 NT_008470.18
| Proteins for AMBP
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: AMBP_HUMAN, P02760 (See
protein sequence)Recommended Name: Protein AMBP precursor Size: 352 amino acids; 38999 Da
Subunit: I-alpha-I plasma protease inhibitors are assembled from one or two heavy chains (H1, H2 or H3) and one light chain, bikunin. Inter-alpha-inhibitor (I-alpha-I) is composed of H1, H2 and bikunin, inter-alpha-like inhibitor (I-alpha-LI) of H2 and bikunin, and pre-alpha-inhibitor (P-alpha-I) of H3 and bikunin. Alpha-1-microglobulin occurs as a monomer and also in complexes with IgA and albumin. Alpha-1-microglobulin interacts with FN1. Trypstatin is a monomer and also occurs as a complex with tryptase in mast cells (By similarity). Alpha-1-microglobulin and bikunin interact (via SH3 domain) with HEV ORF3 protein
Subcellular location: Secreted
Miscellaneous: In vitro, the first twelve residues of the amino end of the inhibitor appear to have a reactive site capable of inhibiting the activity of a number of enzymes. Its in vivo function is not known
PDB structures from and Proteopedia :1BIK (3D)
 
Secondary accessions: P00977 P02759 P78491 Q2TU33 Q5TBD7 Q9UC58 Q9UDI8Post-translational modifications:
The precursor is proteolytically processed into separately functioning proteins1
3-hydroxykynurenine, an oxidized tryptophan metabolite that is common in biological fluids, reacts with Cys-53, Lys-111, Lys-137, and Lys-149 to form heterogeneous polycyclic chromophores including hydroxanthommatin. The reaction by alpha-1-microglobulin is autocatalytic; the human protein forms chromophore even when expressed in insect and bacterial cells. The chromophore can react with accessible cysteines forming non-reducible thioether cross-links with other molecules of alpha-1-microglobulin or with other proteins such as Ig alpha-1 chain C region 'Cys-352'1
Heavy chains are interlinked with bikunin via a chondroitin 4-sulfate bridge to the their C-terminal aspartate (By similarity)1
Addition of glycosaminoglycan chondroitin sulfate, allows cross-linking between the different components1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001624.1
ENSEMBL proteins: ENSP00000265132
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for AMBP: Assays for AMBP: | Protein
Domains/ Families for AMBP(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P02760
ProtoNet protein and cluster: P02760 3 Blocks protein families: IPB002223 Pancreatic trypsin inhibitor (Kunitz) IPB002345 Lipocalin signature IPB002968 Alpha-1-microglobulin signature
UniProtKB/Swiss-Prot: AMBP_HUMAN, P02760Similarity: In the N-terminal section; belongs to the calycin superfamily. Lipocalin familySimilarity: Contains 2 BPTI/Kunitz inhibitor domains | Gene Function for AMBP
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001633
Applied Biosystems Silencer® siRNAs for AMBP
Sigma-Aldrich siRNA for AMBP  Sigma-Aldrich shRNA for AMBP  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001633                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001633                                  untagged cDNA clone in CMV expression vector: NM_001633 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001633
UniProtKB/Swiss-Prot: AMBP_HUMAN, P02760Function: Inter-alpha-trypsin inhibitor inhibits trypsin, plasmin, and lysosomal granulocytic elastase. Inhibits calcium oxalate crystallizationFunction: Trypstatin is a trypsin inhibitor (By similarity)Genatlas biochemistry entry for AMBP:alpha-1-microglobulin (HC,lipocalin family Kernel group),expressed in plasma either as a free form or in covalent complexes with albumine IgA and bikunin precursor (ITIL),complexing with ITIH1,ITIH2, ITIH3 or ITIH4,to form alpha type inhibitor (respectively inter- and pre-)4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Ambp):
5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for AMBP
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
1 Sigma-Aldrich "Your Favorite Gene" Pathway for AMBP (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for AMBP 
5/18 Interacting proteins for AMBP (ENSP000002651323 P027602) via UniProtKB, MINT, and/or STRING (see all 18
)About this table
5/8 Gene Ontology (GO) biological process terms (links to tree view) (see all 8
): About this table
|
Drugs & Compounds for AMBP(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for AMBP 10/32 Novoseek chemical compound relationships for AMBP gene (see all 32
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| calcium oxalate |
75.99 |
39 |
14516400 (3), 10092156 (3), 10541269 (3), 9607205 (2) (see all 15) |
| alpha 2 macroglobulin |
75.31 |
2 |
9837695 (1) |
| chondroitin sulfate |
68.35 |
30 |
7680011 (2), 1708671 (2), 18247611 (2), 11322893 (1) (see all 18) |
| chondroitin |
53.95 |
1 |
7680011 (1) |
| glycosaminoglycan |
53.64 |
10 |
8593487 (2), 1794445 (1), 7528540 (1), 9677337 (1) (see all 9) |
| 99mtc-dmsa |
45.19 |
1 |
2197478 (1) |
| cadmium |
44.66 |
17 |
9816376 (4), 7683309 (3), 9098909 (2), 17943303 (2) (see all 8) |
| polyacrylamide |
43.83 |
11 |
7680331 (1), 7512818 (1), 1718393 (1), 1382972 (1) (see all 8) |
| hanp |
41.04 |
2 |
1287423 (1), 8219653 (1) |
| heparan sulfate |
25.30 |
3 |
15235923 (1), 14977559 (1) |
About this table
|
Transcripts for AMBP(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001633
Sigma-Aldrich siRNA for AMBP  Sigma-Aldrich shRNA for AMBP  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001633 REFSEQ mRNAs for AMBP gene: NM_001633.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001633               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001633                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001633                                  untagged cDNA clone in CMV expression vector: NM_001633  Additional cDNA sequence: AK290837.1 AK303795.1 AK310776.1 AK310791.1 AY544123.1 BC041593.1 CR607981.1 CR615737.1 CR616173.1 M11562.1 X04225.1 X04494.1 10 DOTS entries: DT.454719 DT.100878286 DT.92460856 DT.95156021 DT.92460868 DT.100878287 DT.95164087 DT.95164092 DT.95164112 DT.95164091 24/416 AceView cDNA sequences (see all 416
):CB156785 AV646247 CB164007 BM742633 T72138 AV652004 X04494 AV656943 AV657651 AV645689 NM_001633 CA866523 AV654397 AV653939 AV659596 AV653347 AV646210 AA343929 AV654216 AV646204 AV646174 X04225 CR616173 AV695187
highest scoring ESTs for AMBP:AI133364 AV656943 AV656956 AV692644 BC041593 BG616673 BI252255 BI918693 BM005934 BM742633 Unigene Cluster for AMBP: Alpha-1-microglobulin/bikunin precursor Hs.436911 [show with all ESTs]Unigene Representative Sequence: NM_001633
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000265132
|
Expression for AMBP
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| AMBP expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for AMBP
1 / 2 / 3 3 probe-sets matching AMBP gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGCAACGGTA
SOURCE GeneReport for Unigene cluster: Hs.436911
Expression variation in blood from EXPOLDB for AMBP UniProtKB/Swiss-Prot: AMBP_HUMAN, P02760Tissue specificity: Expressed by the liver and secreted in plasma. Alpha-1-microglobulin occurs in many physiological fluids including plasma, urine, and cerebrospinal fluid. Inter-alpha-trypsin inhibitor is present in plasma and urine |
Orthologs for AMBP
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for AMBP gene from 5/9 species (see all 9
)
About this table Species with no ortholog for AMBP
ENSEMBL Gene Tree for AMBP | Paralogs for AMBP(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for AMBP gene
- SPINT22 TFPI22 TFPI2
|
SNPs/Variants for AMBP(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for AMBP (up to first 250kb)
|
Disorders & Mutations for AMBP
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 176870
10/68 Novoseek disease relationships for AMBP gene (see all 68
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| proteinuria |
72.65 |
25 |
7554530 (2), 7685986 (1), 9072628 (1), 9395812 (1) (see all 21) |
| microalbuminuria |
62.76 |
5 |
7532743 (2), 1533771 (1) |
| renal disease |
58.23 |
15 |
1370761 (1), 8969545 (1), 9072628 (1), 12399625 (1) (see all 15) |
| albuminuria |
56.47 |
4 |
10332434 (1), 9078324 (1), 7691491 (1), 7554530 (1) |
| renal stone |
53.36 |
5 |
10092156 (2), 11435884 (1), 10541279 (1) |
| diabetic nephropathies |
51.91 |
2 |
9342486 (1), 8593760 (1) |
| kidney dysfunction |
51.55 |
1 |
9072628 (1) |
| response acute phase |
41.19 |
4 |
7532586 (1), 15709178 (1), 1285244 (1) |
| vesicoureteral reflux |
39.07 |
2 |
8969545 (1), 7681890 (1) |
| urolithiasis |
38.73 |
4 |
11435884 (1), 16104926 (1), 9680501 (1), 12230607 (1) |
About this table
|
Medical News for AMBP(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for AMBP (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/432 PubMed articles for AMBP gene (see all 432
):- Structure of the human alpha 1-microglobulin-bikunin gene. (PubMed id 1708673)1, 2, 3, 4 Vetr H. and Gebhard W. (1990)
- Homologous chromosomal locations of the four genes for inter-alpha-inhibitor and pre-alpha-inhibitor family in human and mouse: assignment of the ancestral gene for the lipocalin superfamily. (PubMed id 1385302)1, 2, 3 Salier J.P....Mattei M.G. (1992)
- The 41-amino-acid C-terminal region of the hepatitis E virus ORF3 protein interacts with bikunin, a kunitz-type serine protease inhibitor. (PubMed id 16140784)1, 3, 4 Tyagi S....Lal S.K. (2005)
- Presence of the protein-glycosaminoglycan-protein covalent cross-link in the inter-alpha-inhibitor-related proteinase inhibitor heavy chain 2/bikunin. (PubMed id 7682553)1, 3, 4 Enghild J.J....Hefta S.A. (1993)
- Chondroitin sulphate covalently cross-links the three polypeptide chains of inter-alpha-trypsin inhibitor. (PubMed id 7513643)1, 3, 4 Morelle W.... Mizon J. (1994)
- The ORF3 protein of hepatitis E virus interacts with liver-specific alpha1-microglobulin and its precursor alpha1-microglobulin/bikunin precursor (AMBP) and expedites their export from the hepatocyte. (PubMed id 15037615)1, 3, 4 Tyagi S....Lal S.K. (2004)
- Human alpha-1-microglobulin is covalently bound to kynurenine-derived chromophores. (PubMed id 15452109)3, 4 Sala A.... Galliano M. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Alpha(1)-microglobulin: a yellow-brown lipocalin. (PubMed id 11058759)3, 4 Akerstroem B.... Lindqvist A. (2000)
- Alpha1-microglobulin chromophores are located to three lysine residues semiburied in the lipocalin pocket and associated with a novel lipophilic compound. (PubMed id 10631976)3, 4 Berggard T.... Akerstroem B. (1999)
|
Search for AMBP
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing AMBP
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing AMBP
(According to HUGE)
About This Section
| -- |
Specialized Databases showing AMBP(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for AMBP(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for AMBP:

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