Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ALPP Gene

Aliases for ALPP Gene

  • Alkaline Phosphatase, Placental 2 3
  • Alkaline Phosphatase Regan Isozyme 3 4
  • Placental Alkaline Phosphatase 1 3 4
  • EC 3.1.3.1 4 63
  • PLAP-1 3 4
  • PLAP 3 4
  • Alkaline Phosphatase, Placental (Regan Isozyme) 2
  • Alkaline Phosphomonoesterase 3
  • Glycerophosphatase 3
  • Regan Isozyme 2
  • PALP 3
  • ALP 3

External Ids for ALPP Gene

Previous GeneCards Identifiers for ALPP Gene

  • GC02P231300
  • GC02P231972
  • GC02P233207
  • GC02P233445
  • GC02P233068
  • GC02P232951
  • GC02P233244
  • GC02P225094

Summaries for ALPP Gene

Entrez Gene Summary for ALPP Gene

  • The protein encoded by this gene is an alkaline phosphatase, a metalloenzyme that catalyzes the hydrolysis of phosphoric acid monoesters. It belongs to a multigene family composed of four alkaline phosphatase isoenzymes. The enzyme functions as a homodimer and has a catalytic site containing one magnesium and two zinc ions, which are required for its enzymatic function. The protein is primarily expressed in placental and endometrial tissue; however, strong ectopic expression has been detected in ovarian adenocarcinoma, serous cystadenocarcinoma, and other ovarian cancer cells. [provided by RefSeq, Jan 2015]

GeneCards Summary for ALPP Gene

ALPP (Alkaline Phosphatase, Placental) is a Protein Coding gene. Diseases associated with ALPP include fascioliasis and obstructive jaundice. Among its related pathways are Metabolism and NAD metabolism. GO annotations related to this gene include magnesium ion binding and alkaline phosphatase activity. An important paralog of this gene is ALPL.

Gene Wiki entry for ALPP Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALPP Gene

Genomics for ALPP Gene

Regulatory Elements for ALPP Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ALPP Gene

Chromosome:
2
Start:
232,378,534 bp from pter
End:
232,382,889 bp from pter
Size:
4,356 bases
Orientation:
Plus strand

Genomic View for ALPP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ALPP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALPP Gene

Proteins for ALPP Gene

  • Protein details for ALPP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P05187-PPB1_HUMAN
    Recommended name:
    Alkaline phosphatase, placental type
    Protein Accession:
    P05187
    Secondary Accessions:
    • P05188
    • P06861
    • Q53S78
    • Q96DB7

    Protein attributes for ALPP Gene

    Size:
    535 amino acids
    Molecular mass:
    57954 Da
    Cofactor:
    Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Note=Binds 1 Mg(2+) ion.;
    Cofactor:
    Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 2 Zn(2+) ions.;
    Quaternary structure:
    • Homodimer.
    Miscellaneous:
    • In most mammals there are four different isozymes: placental, placental-like, intestinal and tissue non-specific (liver/bone/kidney)
    SequenceCaution:
    • Sequence=AAA51708.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ALPP Gene

neXtProt entry for ALPP Gene

Proteomics data for ALPP Gene at MOPED

Post-translational modifications for ALPP Gene

  • Glycosylation at Asn 144 and Asn 271
  • Modification sites at PhosphoSitePlus

Other Protein References for ALPP Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • R&D Systems Antibodies for ALPP (Alkaline Phosphatase/ALPP)
  • R&D Systems Antibodies for ALPP (Alkaline Phosphatase/ALPP/ALPI)
  • Cell Signaling Technology (CST) Antibodies for ALPP (ALPP)

Domains & Families for ALPP Gene

Gene Families for ALPP Gene

Suggested Antigen Peptide Sequences for ALPP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P05187

UniProtKB/Swiss-Prot:

PPB1_HUMAN :
  • Belongs to the alkaline phosphatase family.
Family:
  • Belongs to the alkaline phosphatase family.
genes like me logo Genes that share domains with ALPP: view

Function for ALPP Gene

Molecular function for ALPP Gene

GENATLAS Biochemistry:
phosphatase alkaline,placental (Regan isozyme)
UniProtKB/Swiss-Prot CatalyticActivity:
A phosphate monoester + H(2)O = an alcohol + phosphate.

Enzyme Numbers (IUBMB) for ALPP Gene

Gene Ontology (GO) - Molecular Function for ALPP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000287 magnesium ion binding ISS --
GO:0003824 catalytic activity --
GO:0004035 alkaline phosphatase activity NAS 3042787
GO:0005515 protein binding IPI 25416956
GO:0008270 zinc ion binding ISS --
genes like me logo Genes that share ontologies with ALPP: view
genes like me logo Genes that share phenotypes with ALPP: view

Animal Models for ALPP Gene

MGI Knock Outs for ALPP:

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ALPP

In Situ Assay Products

Flow Cytometry Products

No data available for miRNA , Transcription Factor Targets and HOMER Transcription for ALPP Gene

Localization for ALPP Gene

Subcellular locations from UniProtKB/Swiss-Prot for ALPP Gene

Cell membrane; Lipid-anchor, GPI-anchor.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ALPP Gene COMPARTMENTS Subcellular localization image for ALPP gene
Compartment Confidence
plasma membrane 5
cytoskeleton 3
cytosol 3
extracellular 3
nucleus 3
vacuole 3
endoplasmic reticulum 2
golgi apparatus 2
lysosome 2
mitochondrion 2
peroxisome 2
endosome 1

Gene Ontology (GO) - Cellular Components for ALPP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0009986 cell surface IDA 15907827
GO:0016021 integral component of membrane IEA --
GO:0031225 anchored component of membrane IEA --
genes like me logo Genes that share ontologies with ALPP: view

Pathways & Interactions for ALPP Gene

genes like me logo Genes that share pathways with ALPP: view

Pathways by source for ALPP Gene

1 BioSystems pathway for ALPP Gene
2 KEGG pathways for ALPP Gene
2 GeneGo (Thomson Reuters) pathways for ALPP Gene

Gene Ontology (GO) - Biological Process for ALPP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006470 protein dephosphorylation --
GO:0008152 metabolic process --
GO:0016311 dephosphorylation NAS 3042787
genes like me logo Genes that share ontologies with ALPP: view

No data available for SIGNOR curated interactions for ALPP Gene

Drugs & Compounds for ALPP Gene

(72) Drugs for ALPP Gene - From: NovoSeek, HMDB, ApexBio, and DrugBank

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Alendronate Approved Pharma Inhibition, Inhibitor Bone resorption inhibitor, Osteoclast function modifiers (important in bone metastasis) 153
Atorvastatin Approved Pharma Competitive, Inhibitor 690
Bezafibrate Approved Pharma Agonist 11
Calcium carbonate Approved Pharma 185
Carbamazepine Approved, Investigational Pharma Inhibitor of neuronal voltage-gated Na+ channels; anticonvulsant 115

(73) Additional Compounds for ALPP Gene - From: NovoSeek and HMDB

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
dihydroneopterin triphosphate
  • 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl) dihydropteridine triphosphate
  • 6-(L-Erythro-1,2-Dihydroxypropyl 3-triphosphate)-7,8-dihydropterin
  • 6-[(1S,2R)-1,2-Dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin
  • 7,8-Dihydroneopterin 3'-triphosphate
  • 7,8-Dihydroneopterin triphosphate
20574-65-6
Dihydroxyacetone phosphate
  • 1,3-Dihydroxy-2-Propanone mono(dihydrogen phosphate)
  • 1,3-Dihydroxy-2-propanone phosphate
  • 1,3-Dihydroxyacetone 1-phosphate
  • 1-Hydroxy-3-(phosphonooxy)-2-Propanone
  • 1-Hydroxy-3-(phosphonooxy)acetone
57-04-5
Phosphate
  • NFB Orthophosphate
  • O-Phosphoric acid
  • Ortho-phosphate
  • Orthophosphate (PO43-)
  • Orthophosphate(3-)
14265-44-2
phosphoric acid
  • Acide phosphorique (FRENCH)
  • Acido fosforico [Italian]
  • Acidum phosphoricum
  • Diphosphate tetrasodium
  • Fosforzuuroplossingen [Dutch]
7664-38-2
Water
  • Dihydrogen oxide
  • Steam
7732-18-5
genes like me logo Genes that share compounds with ALPP: view

Transcripts for ALPP Gene

mRNA/cDNA for ALPP Gene

Unigene Clusters for ALPP Gene

Alkaline phosphatase, placental:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ALPP

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ALPP Gene

No ASD Table

Relevant External Links for ALPP Gene

GeneLoc Exon Structure for
ALPP
ECgene alternative splicing isoforms for
ALPP

Expression for ALPP Gene

mRNA expression in normal human tissues for ALPP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ALPP Gene

This gene is overexpressed in Lung (x33.1), Cervix - Endocervix (x9.2), and Fallopian Tube (x4.9).

Protein differential expression in normal tissues from HIPED for ALPP Gene

This gene is overexpressed in Cervix (35.1) and Placenta (32.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for ALPP Gene



SOURCE GeneReport for Unigene cluster for ALPP Gene Hs.284255

mRNA Expression by UniProt/SwissProt for ALPP Gene

P05187-PPB1_HUMAN
Tissue specificity: Detected in placenta (at protein level).
genes like me logo Genes that share expression patterns with ALPP: view

Protein tissue co-expression partners for ALPP Gene

Primer Products

In Situ Assay Products

Orthologs for ALPP Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ALPP Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Alpi 35
  • 78.41 (n)
  • 76.58 (a)
Alppl2 16
Akp3 36
  • 69 (a)
ManyToMany
Alpi 36
  • 69 (a)
ManyToMany
Alppl2 36
  • 73 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia ALPP 35
  • 97.99 (n)
  • 98.05 (a)
ALPP 36
  • 95 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Alpi 35
  • 78.75 (n)
  • 76.46 (a)
cow
(Bos Taurus)
Mammalia -- 36
  • 75 (a)
ManyToMany
-- 36
  • 76 (a)
ManyToMany
-- 36
  • 74 (a)
ManyToMany
-- 36
  • 74 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 73 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 70 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 73 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 36
  • 64 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 60 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii alp3 36
  • 51 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta Aph-4 37
  • 43 (a)
CG10592 37
  • 43 (a)
CG10827 37
  • 42 (a)
CG16771 37
  • 38 (a)
CG1809 37
  • 43 (a)
CG3264 37
  • 42 (a)
CG3290 37
  • 42 (a)
CG3292 37
  • 40 (a)
CG5150 37
  • 42 (a)
CG5656 37
  • 44 (a)
CG8105 37
  • 38 (a)
Aph-4 35
  • 53.41 (n)
  • 46.74 (a)
Aph-4 36
  • 33 (a)
ManyToMany
CG10592 36
  • 34 (a)
ManyToMany
CG10827 36
  • 35 (a)
ManyToMany
CG16771 36
  • 27 (a)
ManyToMany
CG1809 36
  • 37 (a)
ManyToMany
CG3264 36
  • 34 (a)
ManyToMany
CG3290 36
  • 32 (a)
ManyToMany
CG3292 36
  • 32 (a)
ManyToMany
CG5150 36
  • 35 (a)
ManyToMany
CG5361 36
  • 22 (a)
ManyToMany
CG5656 36
  • 37 (a)
ManyToMany
CG8105 36
  • 35 (a)
ManyToMany
CG8147 36
  • 34 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010596 35
  • 52.05 (n)
  • 43.86 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes PHO8 36
  • 21 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 39 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
CSA.180 36
  • 38 (a)
ManyToMany
CSA.4362 36
  • 37 (a)
ManyToMany
Species with no ortholog for ALPP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ALPP Gene

ENSEMBL:
Gene Tree for ALPP (if available)
TreeFam:
Gene Tree for ALPP (if available)

Paralogs for ALPP Gene

Paralogs for ALPP Gene

(3) SIMAP similar genes for ALPP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ALPP: view

Variants for ALPP Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for ALPP Gene

P05187-PPB1_HUMAN
Placental ALP is highly polymorphic, there are at least three common alleles

Sequence variations from dbSNP and Humsavar for ALPP Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs708 -- 232,381,248(-) GCCCT(G/T)CAGAG intron-variant
rs1048984 -- 232,379,795(+) ACACG(A/G)GTGCA reference, synonymous-codon
rs1048985 -- 232,379,804(+) CAGCA(A/C/T)GCCTC missense, reference
rs1048988 - 232,380,220(+) GTTTC(C/G/T)CATGG missense, reference
rs1048989 -- 232,380,227(+) ATGGG(A/G)ACCCC reference, synonymous-codon

Structural Variations from Database of Genomic Variants (DGV) for ALPP Gene

Variant ID Type Subtype PubMed ID
nsv875971 CNV Loss 21882294
nsv522450 CNV Loss 19592680
esv34493 CNV Gain 17911159
nsv821918 CNV Gain 20364138
nsv875977 CNV Loss 21882294
dgv675e201 CNV Deletion 23290073
dgv4449n71 CNV Gain 21882294
nsv875979 CNV Gain 21882294
esv2659833 CNV Deletion 23128226
dgv493n27 CNV Loss 19166990
dgv4450n71 CNV Loss 21882294
dgv4451n71 CNV Gain+Loss 21882294
dgv494n27 CNV Gain 19166990
nsv436293 CNV Deletion 17901297
dgv1294e1 CNV Complex 17122850
nsv521461 CNV Loss 19592680
nsv438382 CNV Loss 16468122
nsv875992 CNV Gain 21882294
nsv875994 CNV Gain 21882294
dgv4452n71 CNV Gain 21882294
nsv518263 CNV Loss 19592680
nsv875996 CNV Loss 21882294
nsv482057 CNV Gain 20164927

Variation tolerance for ALPP Gene

Residual Variation Intolerance Score: 94.07% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.14; 84.67% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ALPP Gene

HapMap Linkage Disequilibrium report
ALPP
Human Gene Mutation Database (HGMD)
ALPP

Disorders for ALPP Gene

MalaCards: The human disease database

(145) MalaCards diseases for ALPP Gene - From: DISEASES, NovoSeek, and GeneCards

Disorder Aliases PubMed IDs
fascioliasis
  • liver flukes nos
obstructive jaundice
  • obstructive jaundice nos
hepatic tuberculosis
  • tuberculosis of liver
submandibular adenitis
  • submandibular lymphadenitis
kidney osteogenic sarcoma
  • renal osteogenic sarcoma
- elite association
Search ALPP in MalaCards View complete list of genes associated with diseases

Relevant External Links for ALPP

Genetic Association Database (GAD)
ALPP
Human Genome Epidemiology (HuGE) Navigator
ALPP
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ALPP
genes like me logo Genes that share disorders with ALPP: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ALPP Gene

Publications for ALPP Gene

  1. Evaluation of the osteogenic potential and vascularization of 3D poly(3)hydroxybutyrate scaffolds subcutaneously implanted in nude rats. (PMID: 19170159) Rentsch C. … Zwipp H. (J Biomed Mater Res A 2010) 23 67
  2. Breed-specific variation of hematologic and biochemical analytes in healthy adult Bernese Mountain dogs. (PMID: 19793229) Nielsen L. … Kristensen A.T. (Vet Clin Pathol 2010) 23 67
  3. Association between serum alkaline phosphatase and C-reactive protein in the United States National Health and Nutrition Examination Survey 2005-2006. (PMID: 19958209) Webber M. … Cheung B.M. (Clin. Chem. Lab. Med. 2010) 23 67
  4. Effects of hydroxyapatite and Biostite on osteogenic induction of hMSC. (PMID: 20077014) Marinucci L. … Locci P. (Ann Biomed Eng 2010) 23 67
  5. Lack of sustained response to teriparatide in a patient with adult hypophosphatasia. (PMID: 20089612) Gagnon C. … Ebeling P.R. (J. Clin. Endocrinol. Metab. 2010) 23 67

Products for ALPP Gene

  • Addgene plasmids for ALPP

Sources for ALPP Gene

Back to Top

Content