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Aliases & Descriptions for ALOX5
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| 5-LO 2, 3 | | 5-LOX 1, 2 | | 5-lipoxygenase 3 | | 5LPG 2 | | EC 1.13.11.34 3 | | LOG5 2, 3 | | MGC163204 2 | | OTTHUMP00000019502 2 |
| | | Descriptions |
|---|
| arachidonate 5-lipoxygenase 2 | | arachidonic acid 5-lipoxygenase 2 | | leukotriene A4 synthase 2 |
|
| | Search outside databases for aliases for ALOX5 genePrevious GC identifers: GC10P045171 GC10P045338 GC10P045644 GC10P045153 |
Summaries for ALOX5(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ALOX5: This gene encodes a member of the lipoxygenase gene family and plays a dual role in the synthesis of leukotrienes from arachidonic acid. The encoded protein, which is expressed specifically in bone marrow-derived cells, catalyzes the conversion of arachidonic acid to 5(S)-hydroperoxy-6-trans-8,11,14-cis-eicosatetraenoic acid, and further to the allylic epoxide 5(S)-trans-7,9-trans-11,14-cis-eicosatetrenoic acid (leukotriene A4). Leukotrienes are important mediators of a number of inflammatory and allergic conditions. Mutations in the promoter region of this gene lead to a diminished response to antileukotriene drugs used in the treatment of asthma and may also be associated with atherosclerosis and several cancers. Alternatively spliced transcript variants have been observed, but their full-length nature has not been determined. [provided by RefSeq] UniProtKB/Swiss-Prot: LOX5_HUMAN, P09917Function: Catalyzes the first step in leukotriene biosynthesis, and thereby plays a role in inflammatory processesGene Wiki entry for ALOX5 (Arachidonate_5-lipoxygenase) |
Genomic Location for ALOX5
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ALOX5 gene 
Entrez Gene cytogenetic band: 10q11.2 Ensembl cytogenetic band: 10q11.21 HGNC cytogenetic band: 10q11.2ALOX5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P045189:
(about GC identifiers)
Start:
|
45,189,635 bp from pter |
End:
|
45,261,571 bp from pter |
Size:
|
71,937 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000010.9 NT_033985.6
| Proteins for ALOX5
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: LOX5_HUMAN, P09917 (See
protein sequence)Recommended Name: Arachidonate 5-lipoxygenase Size: 674 amino acids; 77983 Da
Cofactor: Binds 1 iron ion per subunit (By similarity)
Cofactor: Binds 2 calcium ions per subunit (By similarity)
Subunit: Interacts with ALOX5AP and LTC4S
Subcellular location: Cytoplasm. Nucleus matrix. Nucleus membrane; Peripheral membrane protein. Note=Shuttles between cytoplasm and nucleus. Found exclusively in the nucleus, when phosphorylated on Ser-272. Calcium binding promotes translocation from the cytosol and the nuclear matrix to the nuclear envelope and membrane association
PDB structures from and Proteopedia :2ABV (3D)
 
Secondary accessions: Q5JQ14Post-translational modifications:
Serine phosphorylation by MAPKAPK2 is stimulated by arachidonic acid. Phosphorylation on Ser-523 by PKA has an inhibitory effect. Phosphorylation on Ser-272 prevents export from the nucleus1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_000689.1
ENSEMBL proteins: ENSP00000363512
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: ALOX5 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ALOX5:  | Invitrogen Antibodies for ALOX5 |  | Millipore Mono- and Polyclonal Antibodies for the study of ALOX5 |  | Sigma-Aldrich Antibodies for ALOX5 |  | R&D Systems Antibodies for ALOX5 (5-Lipoxygenase) |  | Cell Signaling Technology (CST) Antibodies for ALOX5  (5-Lipoxygenase) |  | Antibodies from Abcam (5 Lipoxygenase), each with their AbpromiseSM |  | Monoclonal and Polyclonal Antibodies from Abnova (ALOX5) |  | Novus Biologicals Antibodies for ALOX5 |
Assays for ALOX5: | Protein
Domains/ Families for ALOX5(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P09917
ProtoNet protein and cluster: P09917 3 Blocks protein families: IPB000907 Lipoxygenase IPB001024 Lipoxygenase IPB001885 Mammalian lipoxygenase signature
UniProtKB/Swiss-Prot: LOX5_HUMAN, P09917Similarity: Belongs to the lipoxygenase familySimilarity: Contains 1 lipoxygenase domainSimilarity: Contains 1 PLAT domain | Gene Function for ALOX5
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000698
Applied Biosystems Silencer® siRNAs for ALOX5
Sigma-Aldrich siRNA and siRNA Panels for ALOX5  Sigma-Aldrich shRNA for ALOX5  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000698                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000698                                  untagged cDNA clone in CMV expression vector: NM_000698 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000698
UniProtKB/Swiss-Prot: LOX5_HUMAN, P09917Function: Catalyzes the first step in leukotriene biosynthesis, and thereby plays a role in inflammatory processesCatalytic activity: Arachidonate + O(2) = leukotriene A(4) + H(2)OEnzyme Number (IUBMB): EC 1.13.11.34 Genatlas biochemistry entry for ALOX5:arachidonate-5-lipoxygenase,lipid peroxidating enzyme implicated in the pathogenesis of inflammatory disorders as well as membrane remodeling,carcinogenesis,atheroma and asthma formation,involved in leukotriene metabolism6 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Alox5):
5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for ALOX5
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
3 Sigma-Aldrich "Your Favorite Gene" Pathways for ALOX5 (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: LOX5_HUMAN, P09917Pathway: Lipid metabolism; leukotriene A4 biosynthesis Gene Network CentralTM Interacting Genes and Proteins Network for ALOX5 
5/65 Interacting proteins for ALOX5 (ENSP000003635123 P099171) via UniProtKB, MINT, and/or STRING (see all 65
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006954 | inflammatory response |
IEA | -- | | GO:0019370 | leukotriene biosynthetic process |
IEA | -- | | GO:0055114 | oxidation reduction |
IEA | -- | About this table
|
Drugs & Compounds for ALOX5(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for ALOX5 |
 | Sigma-Aldrich Small Molecules for ALOX5: Inhibitor |
Compounds for ALOX5 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| 2-TEDC | 5-, 12-, 15-Lipoxygenase inhibitor | [132465-10-2] | | BW-B 70C | 5-Lipoxygenase inhibitor | [134470-38-5] | | STEARDA | Endogenous lipid, active in vivo. Enhances effects of endovanilloids at TRPV1 receptors | [105955-10-0] | | Zileuton | Orally active 5-LOX inhibitor | [111406-87-2] | | Baicalein | 5- and 12-Lipoxygenase inhibitor | [491-67-8] | About this table
10/43 Novoseek chemical compound relationships for ALOX5 gene (see all 43
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leukotriene b4 |
95.70 |
436 |
14530386 (6), 1330161 (5), 1314503 (4), 9142859 (4) (see all 99) |
| arachidonic acid |
94.04 |
858 |
16275640 (8), 8049076 (6), 7577949 (4), 11867685 (4) (see all 99) |
| 5-hydroxyeicosatetraenoic acid |
92.76 |
60 |
8358023 (3), 9789062 (3), 1328141 (1), 8223906 (1) (see all 32) |
| ltc4 |
88.65 |
82 |
7900879 (3), 10102384 (3), 9296112 (2), 9431445 (2) (see all 49) |
| licofelone |
88.48 |
45 |
17704828 (10), 18268076 (2), 11550975 (2), 15498796 (2) (see all 13) |
| 5-hpete |
88.44 |
37 |
8395245 (4), 7811715 (3), 8164257 (2), 1848236 (2) (see all 18) |
| sc41661a |
86.34 |
3 |
8497493 (2), 7747166 (1) |
| lte4 |
86.20 |
27 |
19336727 (3), 15519606 (2), 2153812 (1), 9596112 (1) (see all 17) |
| boswellic acids |
83.76 |
23 |
19374837 (4), 1602379 (3), 9103531 (2), 8510458 (2) (see all 12) |
| 2,3,5-trimethyl-6-(3-pyridylmethyl)-1,4-benzoquinone |
81.13 |
5 |
1847762 (1), 9062405 (1), 1992126 (1), 1893498 (1) (see all 5) |
About this table
3 PharmGKB drug compound relationships for ALOX5 geneAbout this table
|
Transcripts for ALOX5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000698
Sigma-Aldrich siRNA and siRNA Panels for ALOX5  Sigma-Aldrich shRNA for ALOX5  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000698 REFSEQ mRNAs for ALOX5 gene: NM_000698.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000698               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000698                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000698                                  untagged cDNA clone in CMV expression vector: NM_000698  Additional cDNA sequence: AK225603.1 AK315223.1 BC034464.1 BC040450.1 BC130332.1 BC132677.1 BC143985.1 BC143986.1 J03571.1 J03600.1 8 DOTS entries: DT.449694 DT.92427412 DT.95193567 DT.97806426 DT.100771760 DT.210270 DT.86839247 DT.95142328 24/177 AceView cDNA sequences (see all 177
):BI837266 CA390028 AI799008 AI798007 AA315865 AI698814 CA439600 BX346381 BQ787144 AI380545 BM726803 BI822076 AA587201 AI075284 BX377162 AA767516 BE676451 BE710304 AA926891 BC040450 BQ786870 AA505143 BC034464 BX386145
highest scoring ESTs for ALOX5:J03600 AA315865 AA521143 AA552112 AA593920 AA613560 AA707722 AA748796 AA766333 AA767202 Unigene Cluster for ALOX5: Arachidonate 5-lipoxygenase Hs.89499 [show with all ESTs]Unigene Representative Sequence: NM_000698
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000374391
|
Expression for ALOX5
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ALOX5 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ALOX5
1 / 2 / 3 7 probe-sets matching ALOX5 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGATGATTAT
SOURCE GeneReport for Unigene cluster: Hs.89499
Expression variation in blood from EXPOLDB for ALOX5 |
Orthologs for ALOX5
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ALOX5 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for ALOX5
ENSEMBL Gene Tree for ALOX5 | Paralogs for ALOX5(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ALOX5 gene
- ALOX12B2 ALOXE32
|
SNPs/Variants for ALOX5(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ALOX5 (up to first 250kb)
|
Disorders & Mutations for ALOX5
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 152390 10/91 Novoseek disease relationships for ALOX5 gene (see all 91
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| asthma |
72.77 |
165 |
8473681 (4), 8129222 (4), 16364163 (4), 8598621 (4) (see all 93) |
| inflammation |
68.28 |
106 |
16250846 (3), 1309754 (2), 12733982 (2), 17305572 (2) (see all 85) |
| leukemia basophilic |
61.30 |
16 |
8071328 (2), 12005204 (1), 8140120 (1), 19243697 (1) (see all 12) |
| ear edema |
60.90 |
4 |
1665293 (2), 7916384 (1), 9599246 (1) |
| asthma exercise-induced |
60.30 |
5 |
8630575 (2), 16027142 (1), 10984370 (1), 17481554 (1) |
| allergic rhinitis |
49.22 |
7 |
9809497 (1), 12607939 (1), 1701029 (1), 9444606 (1) (see all 6) |
| anaphylaxis |
45.41 |
9 |
8081074 (3), 1949224 (1), 8480540 (1), 9532969 (1) (see all 6) |
| atherosclerosis |
45.33 |
45 |
17481551 (2), 14702425 (2), 18842779 (2), 17825794 (2) (see all 28) |
| edema |
44.59 |
17 |
7541689 (2), 1478686 (2), 9444606 (1), 8129222 (1) (see all 12) |
| asthma allergic |
44.17 |
7 |
8994519 (1), 9444606 (1), 1851340 (1), 17481554 (1) (see all 6) |
About this table
3 PharmGKB disease relationships for ALOX5 geneAbout this table
Human Gene Mutation Database: ALOX5 Genetic Association Database: ALOX5 Human Genome Epidemiology Navigator: ALOX5 (42 documents)
|
Medical News for ALOX5(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ALOX5 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/1044 PubMed articles for ALOX5 gene (see all 1044
):- Arachidonate 5-lipoxygenase promoter genotype, dietary arachidonic acid, and atherosclerosis. (PubMed id 14702425)1, 3, 6, 7 Dwyer J.H....Mehrabian M. (2004)
- Arachidonate lipoxygenase (ALOX) and cyclooxygenase (COX) polymorphisms and colon cancer risk. (PubMed id 15308583)3, 4, 6 Goodman J.E.... Harris C.C. (2004)
- 5-Lipoxygenase polymorphism and in-vivo response to leukotriene receptor antagonists. (PubMed id 12107604)3, 6, 7 Fowler S.J....Lipworth B.J. (2002)
- Pharmacogenetic association between ALOX5 promoter genotype and the response to anti-asthma treatment. (PubMed id 10369259)1, 6, 7 Drazen J.M....Drajesk J. (1999)
- Characterization of the human 5-lipoxygenase gene. (PubMed id 2565035)2, 3, 4 Funk C.D.... Samuelsson B. (1989)
- Protein kinase A inhibits leukotriene synthesis by phosphorylation of 5-lipoxygenase on serine 523. (PubMed id 15280375)1, 3, 4 Luo M....Brock T.G. (2004)
- Phosphorylation of serine 271 on 5-lipoxygenase and its role in nuclear export. (PubMed id 18978352)1, 3, 4 Flamand N....Brock T.G. (2009)
- Arachidonic acid regulates the translocation of 5-lipoxygenase to the nuclear membranes in human neutrophils. (PubMed id 16275640)1, 3, 4 Flamand N....Borgeat P. (2006)
- Arachidonic acid promotes phosphorylation of 5-lipoxygenase at Ser- 271 by MAPK-activated protein kinase 2 (MK2). (PubMed id 11844797)1, 3, 4 Werz O.... Radmark O. (2002)
- ALOX5 promoter genotype, asthma severity and LTC production by eosinophils. (PubMed id 16364163)1, 3, 6 Kalayci O....Lilly C. (2006)
|
Search for ALOX5
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ALOX5
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ALOX5
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ALOX5(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ALOX5(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ALOX5:

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| Antibodies & Assays for ALOX5  (5-Lipoxygenase) |
| | | | Tocris compounds for ALOX5 |
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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