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Aliases for ALOX15P1 Gene

Aliases for ALOX15P1 Gene

  • Arachidonate 15-Lipoxygenase Pseudogene 1 2 3
  • Arachidonate 15-Lipoxygenase Pseudogene 2
  • ALOX15P 3

External Ids for ALOX15P1 Gene

Previous HGNC Symbols for ALOX15P1 Gene

  • ALOX15P

Previous GeneCards Identifiers for ALOX15P1 Gene

  • GC17P006560
  • GC17U901726
  • GC17P006565

Summaries for ALOX15P1 Gene

GeneCards Summary for ALOX15P1 Gene

ALOX15P1 (Arachidonate 15-Lipoxygenase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALOX15P1 Gene

Genomics for ALOX15P1 Gene

Regulatory Elements for ALOX15P1 Gene

Enhancers for ALOX15P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G006660 1 Ensembl dbSUPER 0.7 +3.3 3282 1.6 HDGF BMI1 ZFHX2 POLR2A EED ZNF600 ETV6 RELB IKZF2 CREM ENSG00000261996 TXNDC17 SLC13A5 PITPNM3 BCL6B TNK1 ALOX15P1 PIR54331 GC17P006673
GH17G006668 0.9 ENCODE 0.4 +12.6 12611 3.2 ELF3 NFIB KLF17 THRB ZNF48 RARA IKZF2 EGR2 ZBTB2 NCOA1 SLC13A5 TXNDC17 KIAA0753 FBXO39 TEKT1 BCL6B ENSG00000261996 CTDNEP1 PIR54331 GC17P006673
GH17G006666 0.8 ENCODE 0.4 +8.6 8558 0.4 GTF2F1 ELF3 CTCF SAP130 ARID4B CEBPG ZIC2 RAD21 RFX5 TEAD3 ENSG00000261996 KIAA0753 TXNDC17 SLC13A5 MIR195 PITPNM3 BCL6B ALOX15P1 GC17P006673 PIR54331
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ALOX15P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ALOX15P1 Gene

Chromosome:
17
Start:
6,657,719 bp from pter
End:
6,661,382 bp from pter
Size:
3,664 bases
Orientation:
Plus strand

Genomic View for ALOX15P1 Gene

Genes around ALOX15P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALOX15P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALOX15P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALOX15P1 Gene

Proteins for ALOX15P1 Gene

Post-translational modifications for ALOX15P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALOX15P1 Gene

Domains & Families for ALOX15P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALOX15P1 Gene

Function for ALOX15P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALOX15P1 Gene

Localization for ALOX15P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ALOX15P1 Gene

Pathways & Interactions for ALOX15P1 Gene

SuperPathways for ALOX15P1 Gene

No Data Available

Interacting Proteins for ALOX15P1 Gene

Gene Ontology (GO) - Biological Process for ALOX15P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ALOX15P1 Gene

Drugs & Compounds for ALOX15P1 Gene

No Compound Related Data Available

Transcripts for ALOX15P1 Gene

mRNA/cDNA for ALOX15P1 Gene

(1) Additional mRNA sequences :

Unigene Clusters for ALOX15P1 Gene

Arachidonate 15-lipoxygenase pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ALOX15P1 Gene

No ASD Table

Relevant External Links for ALOX15P1 Gene

GeneLoc Exon Structure for
ALOX15P1
ECgene alternative splicing isoforms for
ALOX15P1

Expression for ALOX15P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of ALOX15P1 Gene:

ALOX15P1

SOURCE GeneReport for Unigene cluster for ALOX15P1 Gene:

Hs.549540
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALOX15P1 Gene

Orthologs for ALOX15P1 Gene

No data available for Orthologs and Evolution for ALOX15P1 Gene

Paralogs for ALOX15P1 Gene

No data available for Paralogs for ALOX15P1 Gene

Variants for ALOX15P1 Gene

Sequence variations from dbSNP and Humsavar for ALOX15P1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000142879 -- 6,656,226(+) CGGAG(C/T)AGGTG upstream-variant-2KB
rs1000686716 -- 6,661,603(+) TCTGC(C/T)AGGGT downstream-variant-500B
rs1000899987 -- 6,661,698(+) AGTTA(G/T)TTCAG downstream-variant-500B
rs1001501637 -- 6,660,346(+) GAGGG(C/T)CAGGT intron-variant
rs1002619161 -- 6,658,892(+) GCAGG(C/G)CCAGC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ALOX15P1 Gene

Variant ID Type Subtype PubMed ID
nsv574278 CNV gain 21841781
nsv978354 CNV duplication 23825009

Relevant External Links for ALOX15P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALOX15P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ALOX15P1 Gene

Disorders for ALOX15P1 Gene

Relevant External Links for ALOX15P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ALOX15P1

No disorders were found for ALOX15P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ALOX15P1 Gene

Publications for ALOX15P1 Gene

  1. A gene cluster encoding human epidermis-type lipoxygenases at chromosome 17p13.1: cloning, physical mapping, and expression. (PMID: 11350124) Krieg P. … Fuerstenberger G. (Genomics 2001) 3 64

Products for ALOX15P1 Gene

Sources for ALOX15P1 Gene

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