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Aliases & Descriptions for ALOX15
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| 15-LOX 3 | | 15-LOX-1 1, 2 | | 15-LOX2 2 | | EC 1.13.11.33 3 | | LOG15 3 |
| | | Descriptions |
|---|
| Arachidonate omega-6 lipoxygenase 3 | | arachidonate 15-lipoxygenase 2 |
|
| | Search outside databases for aliases for ALOX15 genePrevious GC identifers: GC17M004960 GC17M004879 GC17M004485 GC17M004740 |
Summaries for ALOX15(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: LOX15_HUMAN, P16050Function: Converts arachidonic acid to 15S-hydroperoxyeicosatetraenoic acid. Also acts on C-12 of arachidonate as well as on linoleic acidGene Wiki entry for ALOX15 |
Genomic Location for ALOX15
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ALOX15 gene 
Entrez Gene cytogenetic band: 17p13.3 Ensembl cytogenetic band: 17p13.2 HGNC cytogenetic band: 17p13.3ALOX15 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17M004480:
(about GC identifiers)
Start:
|
4,480,963 bp from pter |
End:
|
4,491,709 bp from pter |
Size:
|
10,747 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000017.9 NT_010718.15
| Proteins for ALOX15
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: LOX15_HUMAN, P16050 (See
protein sequence)Recommended Name: Arachidonate 15-lipoxygenase Size: 662 amino acids; 74804 Da
Cofactor: Binds 1 iron ion per subunit (By similarity)
Subcellular location: Cytoplasm
PDB structures from and Proteopedia :2ABT (3D)
 
Secondary accessions: A8K2P4 Q8N6R7 Q99657Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001131.3
ENSEMBL proteins: ENSP00000293761
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ALOX15: Assays for ALOX15: | Protein
Domains/ Families for ALOX15(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P16050
ProtoNet protein and cluster: P16050 3 Blocks protein families: IPB000907 Lipoxygenase IPB001024 Lipoxygenase IPB001885 Mammalian lipoxygenase signature
UniProtKB/Swiss-Prot: LOX15_HUMAN, P16050Similarity: Belongs to the lipoxygenase familySimilarity: Contains 1 lipoxygenase domainSimilarity: Contains 1 PLAT domain | Gene Function for ALOX15
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001140
Applied Biosystems Silencer® siRNAs for ALOX15
Sigma-Aldrich siRNA and siRNA Panels for ALOX15  Sigma-Aldrich shRNA for ALOX15  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001140                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001140                                  untagged cDNA clones in CMV expression vector (see all 3): NM_001140 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001140
UniProtKB/Swiss-Prot: LOX15_HUMAN, P16050Function: Converts arachidonic acid to 15S-hydroperoxyeicosatetraenoic acid. Also acts on C-12 of arachidonate as well as on linoleic acidCatalytic activity: Arachidonate + O(2) = (5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoateEnzyme Number (IUBMB): EC 1.13.11.33 Genatlas biochemistry entry for ALOX15:arachidonate-15-lipoxygenase,lipid peroxidating enzyme implicated in the pathogenesis of inflammatory disorders as well as membrane remodeling,carcinogenesis,and atheroma formation,upregulated by mutant TP53 and maybe involved in the development of prostate or colorectal carcinomas7 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Alox15):
5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions for ALOX15
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for ALOX15 (Your Favorite Gene powered by Ingenuity) (see all 8
) 
UniProtKB/Swiss-Prot: LOX15_HUMAN, P16050Pathway: Lipid metabolism; leukotriene D4 biosynthesis Gene Network CentralTM Interacting Genes and Proteins Network for ALOX15 
5/52 Interacting proteins for ALOX15 (ENSP000002937613) via UniProtKB, MINT, and/or STRING (see all 52
)About this table
5 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for ALOX15(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for ALOX15 |
 | Sigma-Aldrich Small Molecules for ALOX15: Inhibitor |
Compounds for ALOX15 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| 2-TEDC | 5-, 12-, 15-Lipoxygenase inhibitor | [132465-10-2] | | PD 146176 | Selective 15-lipoxygenase inhibitor | [4079-26-9] | About this table
10/15 Novoseek chemical compound relationships for ALOX15 gene (see all 15
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| (13s)-hydroxyoctadecadienoic acid |
89.85 |
4 |
10506115 (1), 12510822 (1) |
| 15hpete |
83.55 |
2 |
17305569 (1), 10332966 (1) |
| arachidonic acid |
80.08 |
48 |
1662607 (2), 8195716 (2), 16598376 (2), 10332966 (2) (see all 28) |
| 15-hydroxyeicosatetraenoic acid |
79.94 |
6 |
10332966 (3), 17519227 (1) |
| 13-hpode |
75.39 |
7 |
10400618 (4) |
| linoleic acid |
61.66 |
5 |
10506115 (1), 9931410 (1), 12510822 (1), 17869078 (1) |
| fatty acid |
22.26 |
1 |
9931410 (1) |
| phosphatidylethanolamine |
20.62 |
3 |
17519227 (1) |
| lipid |
16.42 |
4 |
10400618 (2), 1729692 (1), 17918787 (1) |
| histidine |
3.95 |
1 |
10625675 (1) |
About this table
|
Transcripts for ALOX15(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001140
Sigma-Aldrich siRNA and siRNA Panels for ALOX15  Sigma-Aldrich shRNA for ALOX15  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001140 REFSEQ mRNAs for ALOX15 gene: NM_001140.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001140               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001140                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001140                                  untagged cDNA clones in CMV expression vector (see all 3): NM_001140  Additional cDNA sequence: AK290309.1 AK296792.1 AK296821.1 AK296904.1 AK312557.1 AK316126.1 BC029032.1 M23892.1 3 DOTS entries: DT.100020039 DT.120922324 DT.121002907 23 AceView cDNA sequences:NM_001140 BM976589 BQ957032 BX282722 BX113915 M23892 BM975623 CB305636 BM975468 BC029032 BM981991 AU119118 CA436179 CA311119 BQ276406 BI823909 BX644955 BV196138 BE538114 CA405412 AI864921 BU935146 CN478760
highest scoring ESTs for ALOX15:M23892 BC029032 BI823909 BQ957032 BX282722 BX644955 AI864921 BQ276406 CN258952 NM_001140 Unigene Cluster for ALOX15: Arachidonate 15-lipoxygenase Hs.73809 [show with all ESTs]Unigene Representative Sequence: NM_001140
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for ALOX15
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8a | · | 8b | ^ | 9 | ^ | 10 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for ALOX15
1 Ensembl transcript including schematic representation: ENST00000293761
|
Expression for ALOX15
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ALOX15 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ALOX15
1 / 2 / 3 3 probe-sets matching ALOX15 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TGTATCTTCA
SOURCE GeneReport for Unigene cluster: Hs.73809
Expression variation in blood from EXPOLDB for ALOX15 |
Orthologs for ALOX15
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ALOX15 gene from 5 species
About this table Species with no ortholog for ALOX15
ENSEMBL Gene Tree for ALOX15 | Paralogs for ALOX15(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ALOX15 gene
- ALOX12P22 ALOX15B2 ALOX122
|
SNPs/Variants for ALOX15(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ALOX15 (up to first 250kb)
|
Disorders & Mutations for ALOX15
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 152392
10/11 Novoseek disease relationships for ALOX15 gene (see all 11
)
About this table
Human Gene Mutation Database: ALOX15 Genetic Association Database: ALOX15 Human Genome Epidemiology Navigator: ALOX15 (14 documents)
|
Medical News for ALOX15(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ALOX15 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/154 PubMed articles for ALOX15 gene (see all 154
):- Purification of two forms of arachidonate 15-lipoxygenase from human leukocytes. (PubMed id 1662607)1, 3, 4 Izumi T.... Samuelsson B. (1991)
- Association of a single nucleotide polymorphism in the lipoxygenase ALOX15 5'-flanking region (-5229G/A) with bone mineral density. (PubMed id 15838625)1, 3, 6 Urano T....Inoue S. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Human 15-lipoxygenase gene promoter: analysis and identification of DNA binding sites for IL-13-induced regulatory factors in monocytes. (PubMed id 9700053)3, 4 Kelavkar U.... Badr K. (1998)
- Characterization and sequence of an additional 15-lipoxygenase transcript and of the human gene. (PubMed id 9224951)3, 4 Kritzik M.R....Sigal E. (1997)
- Characterization of human 12-lipoxygenase genes. (PubMed id 1570320)2, 3 Funk C.D.... Samuelsson B. (1992)
- A primary determinant for lipoxygenase positional specificity. (PubMed id 1944593)3, 4 Sloane D.L.... Sigal E. (1991)
- Molecular cloning and primary structure of human 15-lipoxygenase. (PubMed id 3202857)3, 4 Sigal E.... Nadel J.A. (1988)
- Arachidonate 15-lipoxygenase (omega-6 lipoxygenase) from human leukocytes. Purification and structural homology to other mammalian lipoxygenases. (PubMed id 3356688)3, 4 Sigal E.... Nadel J.A. (1988)
- Human ALOX12, but not ALOX15, is associated with BMD in white men and women. (PubMed id 16598376)1, 3 Ichikawa S....Econs M.J. (2006)
|
Search for ALOX15
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ALOX15
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ALOX15
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ALOX15(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ALOX15(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ALOX15:

|
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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