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Aliases for ALOX12P2 Gene

Aliases for ALOX12P2 Gene

  • Arachidonate 12-Lipoxygenase Pseudogene 2 2 3 5
  • Hair And Skin Epidermal-Type 12-Lipoxygenase-Related Pseudogene 3
  • 12-Lipoxygenase-Related Protein 3
  • ALOX12E 3

External Ids for ALOX12P2 Gene

Previous GeneCards Identifiers for ALOX12P2 Gene

  • GC17P007185
  • GC17P007528
  • GC17P006701
  • GC17U900075
  • GC17P006997
  • GC17P006737
  • GC17P006759

Summaries for ALOX12P2 Gene

GeneCards Summary for ALOX12P2 Gene

ALOX12P2 (Arachidonate 12-Lipoxygenase Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALOX12P2 Gene

Genomics for ALOX12P2 Gene

Regulatory Elements for ALOX12P2 Gene

Enhancers for ALOX12P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F006853 0.2 ENCODE 7.1 +0.8 781 2.1 ELF3 ARID4B SIN3A DMAP1 THRB RAD21 ZBTB40 ETS1 RARA YY1 TEKT1 FBXO39 SLC13A5 ALOX12P2 GC17M006868
GH17F007078 0.2 Ensembl 5.5 +226.2 226225 2.0 ALOX12P2 CLEC10A PIR51267
GH17F006867 0.9 FANTOM5 ENCODE 5.2 +15.0 15012 2.5 PKNOX1 JUN BRCA1 GATA3 CTBP1 RCOR1 FOSL2 FOS KLF8 CHD2 TEKT1 ALOX12P2 GC17M006868 GC17P006901
GH17F006843 1.1 ENCODE 0.4 -10.1 -10120 0.2 CTCF ZNF654 RFX1 ZFP64 ZBTB11 REST ZNF623 RAD21 ZNF518A ZNF781 NLGN2 ALOX12 ALOX12-AS1 RNASEK RNASEK-C17orf49 MIR497HG SLC13A5 ENSG00000256806 MED31 XAF1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ALOX12P2 on UCSC Golden Path with GeneCards custom track

Promoters for ALOX12P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001804734 824 1201 ELF3 ARID4B SIN3A DMAP1 THRB RAD21 ZBTB40 ETS1 RARA YY1

Genomic Location for ALOX12P2 Gene

6,853,576 bp from pter
6,954,107 bp from pter
100,532 bases
Plus strand

Genomic View for ALOX12P2 Gene

Genes around ALOX12P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALOX12P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALOX12P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALOX12P2 Gene

Proteins for ALOX12P2 Gene

Post-translational modifications for ALOX12P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALOX12P2 Gene

Domains & Families for ALOX12P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALOX12P2 Gene

Function for ALOX12P2 Gene

Molecular function for ALOX12P2 Gene

GENATLAS Biochemistry:
arachidonate-12-lipoxygenase,epidermal type,expressed pseudogene

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALOX12P2 Gene

Localization for ALOX12P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ALOX12P2 Gene

Pathways & Interactions for ALOX12P2 Gene

SuperPathways for ALOX12P2 Gene

No Data Available

Interacting Proteins for ALOX12P2 Gene

Gene Ontology (GO) - Biological Process for ALOX12P2 Gene


No data available for Pathways by source and SIGNOR curated interactions for ALOX12P2 Gene

Transcripts for ALOX12P2 Gene

Unigene Clusters for ALOX12P2 Gene

Arachidonate 12-lipoxygenase pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ALOX12P2 Gene

No ASD Table

Relevant External Links for ALOX12P2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ALOX12P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ALOX12P2 Gene

mRNA differential expression in normal tissues according to GTEx for ALOX12P2 Gene

This gene is overexpressed in Pituitary (x8.3) and Liver (x8.1).

NURSA nuclear receptor signaling pathways regulating expression of ALOX12P2 Gene:


SOURCE GeneReport for Unigene cluster for ALOX12P2 Gene:

genes like me logo Genes that share expression patterns with ALOX12P2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ALOX12P2 Gene

Orthologs for ALOX12P2 Gene

Evolution for ALOX12P2 Gene

Gene Tree for ALOX12P2 (if available)
Gene Tree for ALOX12P2 (if available)

No data available for Orthologs for ALOX12P2 Gene

Paralogs for ALOX12P2 Gene

No data available for Paralogs for ALOX12P2 Gene

Variants for ALOX12P2 Gene

Sequence variations from dbSNP and Humsavar for ALOX12P2 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs10232753 -- 6,884,287(+) gtaga(C/T)tgcaa intron-variant
rs11078652 -- 6,857,619(+) tcata(C/T)gcctt intron-variant
rs11078653 -- 6,875,508(+) cgggc(C/T)aggtg intron-variant
rs111248625 -- 6,876,892(+) TCTGC(A/G/T)TTTGA intron-variant
rs111270840 -- 6,853,726(+) ATATT(C/T)TGAGA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ALOX12P2 Gene

Variant ID Type Subtype PubMed ID
dgv3095n100 CNV loss 25217958
dgv5440n54 CNV loss 21841781
esv21524 CNV loss 19812545
esv2422288 CNV deletion 17116639
esv2715590 CNV deletion 23290073
esv2761944 CNV loss 21179565
esv3582504 CNV loss 25503493
nsv1059072 CNV loss 25217958
nsv1060335 CNV loss 25217958
nsv518777 CNV gain 19592680
nsv521515 CNV loss 19592680

Relevant External Links for ALOX12P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ALOX12P2 Gene

Disorders for ALOX12P2 Gene

Relevant External Links for ALOX12P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ALOX12P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ALOX12P2 Gene

Publications for ALOX12P2 Gene

  1. Cloning of a human "epidermal-type" 12-lipoxygenase-related gene and chromosomal localization to 17p13. (PMID: 9691181) Sun D. … Funk C.D. (Cytogenet. Cell Genet. 1998) 2 3 64
  2. Genome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2. (PMID: 24322204) Winham S.J. … Biernacka J.M. (Mol. Psychiatry 2013) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  4. Characterization of human 12-lipoxygenase genes. (PMID: 1570320) Funk C.D. … Samuelsson B. (Proc. Natl. Acad. Sci. U.S.A. 1992) 3 64

Products for ALOX12P2 Gene

Sources for ALOX12P2 Gene

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