Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ALG1L6P Gene

Aliases for ALG1L6P Gene

  • Asparagine-Linked Glycosylation 1-Like 6, Pseudogene 2 3 5

External Ids for ALG1L6P Gene

Previous GeneCards Identifiers for ALG1L6P Gene

  • GC03P075465

Summaries for ALG1L6P Gene

GeneCards Summary for ALG1L6P Gene

ALG1L6P (Asparagine-Linked Glycosylation 1-Like 6, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALG1L6P Gene

Genomics for ALG1L6P Gene

Regulatory Elements for ALG1L6P Gene

Enhancers for ALG1L6P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F075422 0.9 Ensembl ENCODE 0.4 +7.7 7670 1.5 CTCF ZNF654 NR2F1 TRIM22 REST RAD21 SCRT2 ZNF143 MLLT1 RPL23AP49 LINC02018 ALG1L6P FAM86DP
GH03F075432 1 ENCODE 0.3 +19.4 19437 4.3 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF121 GLIS2 ZNF143 ZNF207 HNRNPA3P6 FAM86DP LINC02018 RPL23AP49 ALG1L6P
GH03F075418 0.2 Ensembl 0.8 +3.0 3034 0.2 OR7E22P ALG1L6P FAM86DP
GH03F075423 0.3 FANTOM5 0.4 +8.6 8586 0.3 RPL23AP49 LINC00960 ALG1L6P FAM86DP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ALG1L6P on UCSC Golden Path with GeneCards custom track

Genomic Location for ALG1L6P Gene

Chromosome:
3
Start:
75,415,067 bp from pter
End:
75,424,731 bp from pter
Size:
9,665 bases
Orientation:
Plus strand

Genomic View for ALG1L6P Gene

Genes around ALG1L6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG1L6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG1L6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALG1L6P Gene

Proteins for ALG1L6P Gene

Post-translational modifications for ALG1L6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG1L6P Gene

Domains & Families for ALG1L6P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALG1L6P Gene

Function for ALG1L6P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG1L6P Gene

Localization for ALG1L6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ALG1L6P Gene

Pathways & Interactions for ALG1L6P Gene

SuperPathways for ALG1L6P Gene

No Data Available

Interacting Proteins for ALG1L6P Gene

Gene Ontology (GO) - Biological Process for ALG1L6P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ALG1L6P Gene

Transcripts for ALG1L6P Gene

mRNA/cDNA for ALG1L6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG1L6P Gene

No ASD Table

Relevant External Links for ALG1L6P Gene

GeneLoc Exon Structure for
ALG1L6P
ECgene alternative splicing isoforms for
ALG1L6P

Expression for ALG1L6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ALG1L6P Gene

NURSA nuclear receptor signaling pathways regulating expression of ALG1L6P Gene:

ALG1L6P
genes like me logo Genes that share expression patterns with ALG1L6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ALG1L6P Gene

Orthologs for ALG1L6P Gene

Evolution for ALG1L6P Gene

ENSEMBL:
Gene Tree for ALG1L6P (if available)
TreeFam:
Gene Tree for ALG1L6P (if available)

No data available for Orthologs for ALG1L6P Gene

Paralogs for ALG1L6P Gene

No data available for Paralogs for ALG1L6P Gene

Variants for ALG1L6P Gene

Relevant External Links for ALG1L6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG1L6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG1L6P Gene

Disorders for ALG1L6P Gene

No disorders were found for ALG1L6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG1L6P Gene

Publications for ALG1L6P Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ALG1L6P Gene

Sources for ALG1L6P Gene

Content
Loading form....