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Aliases for ALG1L6P Gene

Aliases for ALG1L6P Gene

  • Asparagine-Linked Glycosylation 1-Like 6, Pseudogene 2 3 5

External Ids for ALG1L6P Gene

Previous GeneCards Identifiers for ALG1L6P Gene

  • GC03P075465

Summaries for ALG1L6P Gene

GeneCards Summary for ALG1L6P Gene

ALG1L6P (Asparagine-Linked Glycosylation 1-Like 6, Pseudogene) is a Pseudogene.

Additional gene information for ALG1L6P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALG1L6P Gene

Genomics for ALG1L6P Gene

Regulatory Elements for ALG1L6P Gene

Enhancers for ALG1L6P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H075432 1 ENCODE 0.4 +19.4 19437 4.3 HDGF PKNOX1 FOXA2 ARID4B SIN3A DMAP1 YY1 ZNF121 GLIS2 ZNF143 HNRNPA3P6 FAM86DP LINC02018 RPL23AP49 ALG1L6P
GH03H075422 0.9 Ensembl ENCODE 0.4 +7.7 7670 1.5 SMARCA5 CTCF ZNF654 RB1 NR2F1 TRIM22 REST RAD21 SCRT2 NR2C1 RPL23AP49 LINC02018 ALG1L6P FAM86DP
GH03H075418 0.2 Ensembl 0.7 +3.0 3034 0.2 OR7E22P ALG1L6P FAM86DP
GH03H075423 0.3 FANTOM5 0.4 +8.6 8586 0.3 RPL23AP49 LINC00960 ALG1L6P FAM86DP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ALG1L6P on UCSC Golden Path with GeneCards custom track

Genomic Locations for ALG1L6P Gene

Genomic Locations for ALG1L6P Gene
chr3:75,415,067-75,424,731
(GRCh38/hg38)
Size:
9,665 bases
Orientation:
Plus strand
chr3:75,464,218-75,472,067
(GRCh37/hg19)

Genomic View for ALG1L6P Gene

Genes around ALG1L6P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ALG1L6P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ALG1L6P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALG1L6P Gene

Proteins for ALG1L6P Gene

Post-translational modifications for ALG1L6P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALG1L6P Gene

Domains & Families for ALG1L6P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ALG1L6P Gene

Function for ALG1L6P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ALG1L6P Gene

Localization for ALG1L6P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ALG1L6P Gene

Pathways & Interactions for ALG1L6P Gene

SuperPathways for ALG1L6P Gene

No Data Available

Interacting Proteins for ALG1L6P Gene

Gene Ontology (GO) - Biological Process for ALG1L6P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ALG1L6P Gene

Drugs & Compounds for ALG1L6P Gene

No Compound Related Data Available

Transcripts for ALG1L6P Gene

mRNA/cDNA for ALG1L6P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ALG1L6P Gene

No ASD Table

Relevant External Links for ALG1L6P Gene

GeneLoc Exon Structure for
ALG1L6P
ECgene alternative splicing isoforms for
ALG1L6P

Expression for ALG1L6P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ALG1L6P Gene

NURSA nuclear receptor signaling pathways regulating expression of ALG1L6P Gene:

ALG1L6P
genes like me logo Genes that share expression patterns with ALG1L6P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ALG1L6P Gene

Orthologs for ALG1L6P Gene

Evolution for ALG1L6P Gene

ENSEMBL:
Gene Tree for ALG1L6P (if available)
TreeFam:
Gene Tree for ALG1L6P (if available)

No data available for Orthologs for ALG1L6P Gene

Paralogs for ALG1L6P Gene

No data available for Paralogs for ALG1L6P Gene

Variants for ALG1L6P Gene

Relevant External Links for ALG1L6P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ALG1L6P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ALG1L6P Gene

Disorders for ALG1L6P Gene

No disorders were found for ALG1L6P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ALG1L6P Gene

Publications for ALG1L6P Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ALG1L6P Gene

Sources for ALG1L6P Gene

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