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Aliases for ALDH1L1-AS2 Gene

Subcategory (RNA class) for ALDH1L1-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ALDH1L1-AS2 Gene

  • ALDH1L1 Antisense RNA 2 2 3
  • ALDH1L1 Antisense RNA 2 (Non-Protein Coding) 2

External Ids for ALDH1L1-AS2 Gene

ORGUL Members for ALDH1L1-AS2 Gene

Summaries for ALDH1L1-AS2 Gene

GeneCards Summary for ALDH1L1-AS2 Gene

ALDH1L1-AS2 (ALDH1L1 Antisense RNA 2) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ALDH1L1-AS2 Gene

Genomics for ALDH1L1-AS2 Gene

Genomic Location for ALDH1L1-AS2 Gene

Start:
126,180,065 bp from pter
End:
126,210,169 bp from pter
Size:
30,105 bases
Orientation:
Plus strand

Genomic View for ALDH1L1-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ALDH1L1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ALDH1L1-AS2 Gene

No data available for Regulatory Elements for ALDH1L1-AS2 Gene

Proteins for ALDH1L1-AS2 Gene

Post-translational modifications for ALDH1L1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ALDH1L1-AS2 Gene

Domains for ALDH1L1-AS2 Gene

Gene Families for ALDH1L1-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with ALDH1L1-AS2: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for ALDH1L1-AS2 Gene

Function for ALDH1L1-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ALDH1L1-AS2 Gene

Localization for ALDH1L1-AS2 Gene

No data available for Gene Ontology (GO) - Cellular Components for ALDH1L1-AS2 Gene

Pathways for ALDH1L1-AS2 Gene

SuperPathways for ALDH1L1-AS2 Gene

No Data Available

Interacting Proteins for ALDH1L1-AS2 Gene

Gene Ontology (GO) - Biological Process for ALDH1L1-AS2 Gene

None

No data available for Pathways by source for ALDH1L1-AS2 Gene

Transcripts for ALDH1L1-AS2 Gene

mRNA/cDNA for ALDH1L1-AS2 Gene

(3) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ALDH1L1-AS2 Gene

ALDH1L1 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ALDH1L1-AS2 Gene

No ASD Table

Relevant External Links for ALDH1L1-AS2 Gene

GeneLoc Exon Structure for
ALDH1L1-AS2
ECgene alternative splicing isoforms for
ALDH1L1-AS2

Expression for ALDH1L1-AS2 Gene

mRNA expression in normal human tissues for ALDH1L1-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for ALDH1L1-AS2 Gene

This gene is overexpressed in Heart - Left Ventricle (4.5).

SOURCE GeneReport for Unigene cluster for ALDH1L1-AS2 Gene Hs.633362

genes like me logo Genes that share expressions with ALDH1L1-AS2: view

Orthologs for ALDH1L1-AS2 Gene

Evolution for ALDH1L1-AS2 Gene

ENSEMBL:
Gene Tree for ALDH1L1-AS2 (if available)
TreeFam:
Gene Tree for ALDH1L1-AS2 (if available)

No data available for Orthologs for ALDH1L1-AS2 Gene

Paralogs for ALDH1L1-AS2 Gene

No data available for Paralogs for ALDH1L1-AS2 Gene

Variants for ALDH1L1-AS2 Gene

Sequence variations from dbSNP and Humsavar for ALDH1L1-AS2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs722879 -- 126,206,462(+) GTTAA(C/T)AAGCT intron-variant
rs750714 -- 126,185,845(+) CTGGA(A/G)TATTA intron-variant
rs750715 -- 126,186,179(+) TAAAT(A/T)TTGGG intron-variant
rs1107364 -- 126,185,420(-) CCCAC(C/T)TTTCA intron-variant
rs1107365 -- 126,185,364(-) CTGGA(C/G)TAGAG intron-variant

Relevant External Links for ALDH1L1-AS2 Gene

HapMap Linkage Disequilibrium report
ALDH1L1-AS2

No data available for Structural Variations from Database of Genomic Variants (DGV) for ALDH1L1-AS2 Gene

Disorders for ALDH1L1-AS2 Gene

No disorders were found for ALDH1L1-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for ALDH1L1-AS2 Gene

Publications for ALDH1L1-AS2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Genetic variants associated with glycine metabolism and their role in insulin sensitivity and type 2 diabetes. (PMID: 23378610) Xie W. … Walker M. (Diabetes 2013) 3
  4. Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. (PMID: 24324551) Deng X. … Seielstad M. (PLoS ONE 2013) 3
  5. Genome-wide meta-analysis of homocysteine and methionine metabolism identifies five one carbon metabolism loci and a novel association of ALDH1L1 with ischemic stroke. (PMID: 24651765) Williams S.R. … . (PLoS Genet. 2014) 3

Products for ALDH1L1-AS2 Gene

Sources for ALDH1L1-AS2 Gene

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