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Aliases & Descriptions for AKR7A2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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User Feedback Aliases & Descriptions aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)1 2 AFB1-AR 12 3 AFAR1 2 3 SSA reductase2 3 Succinic semialdehyde reductase2 3 aflatoxin B1 aldehyde reductase member 22 Aldoketoreductase 72 3 aflatoxin beta1 aldehyde reductase2 AFB1 aldehyde reductase 12 3 AFB1-AR12 AKR72 3 EC 1.1.1.n113 AFAR12 3
Search outside databases for aliases for AKR7A2 genePrevious GC identifers: GC01M019169 GC01M018618 GC01M018755 GC01M019101 GC01M019102 GC01M019375 GC01M019503
Summaries for AKR7A2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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User Feedback Entrez Gene summary for AKR7A2 : Aldo-keto reductases, such as AKR7A2, are involved in the detoxification of aldehydes and ketones.(supplied by OMIM) UniProtKB/Swiss-Prot: ARK72_HUMAN, O43488 Function : Catalyzes the NADPH-dependent reduction of succinic semialdehyde to gamma-hydroxybutyrate. May have animportant role in producing the neuromodulator gamma-hydroxybutyrate (GHB). Has broad substrate specificity. Has NADPH-dependent aldehyde reductase activity towards 2-carboxybenzaldehyde, 2-nitrobenzaldehyde and pyridine-2-aldehyde (in vitro). Can reduce 1,2-naphthoquinone and 9,10-phenanthrenequinone (in vitro). Can reduce the dialdehyde protein-binding form of aflatoxin B1 (AFB1) to the non-binding AFB1 dialcohol. May be involved in protection of liver against the toxic and carcinogenic effects of AFB1, a potent hepatocarcinogen Gene Wiki entry for AKR7A2
Genomic Views for AKR7A2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl (release 56) ,
Regulatory elements and Epigenetics data according to
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User Feedback Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the AKR7A2 gene upstream (promoter) region :E47 p53 LUN-1 NF-kappaB NF-kappaB1 ZID GR-alpha AP-4 GATA-3 LCR-F1 Epigenetics: SABiosciences Methyl-Profiler DNA Methylation qPCR Primer Assays for AKR7A2: MePH00399-2A Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 1p36.13 Ensembl cytogenetic band: 1p36.13 HGNC cytogenetic band: 1p36.13 AKR7A2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M019630: view genomic region
(about GC identifiers )
Start:
19,630,459 bp from pter
End:
19,638,640 bp from pter
Size:
8,182 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000001.10 NT_004610.19 Proteins for AKR7A2 gene
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene ,
Novus Biologicals , and/or
Sino Biological ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 May 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abnova ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
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User Feedback UniProtKB/Swiss-Prot: ARK72_HUMAN, O43488 (See
protein sequence )Recommended Name: Aflatoxin B1 aldehyde reductase member 2 Size : 359 amino acids; 39589 Da
Subunit : Homodimer
Subcellular location : Golgi apparatus (By similarity). Cytoplasm
Caution : It is uncertain whether Met-1 or Met-30 is the initiator
Sequence caution : Sequence=AAC52104.1; Type=Erroneous initiation; Sequence=AAH04111.3; Type=Erroneous initiation;Sequence=AAH10852.1; Type=Erroneous initiation; Sequence=AAH11586.1; Type=Erroneous initiation; Sequence=AAH12171.1; Type=Erroneous initiation; Sequence=AAH13996.1; Type=Erroneous initiation; Sequence=AAP36011.1; Type=Erroneous initiation; Sequence=CAA76347.1; Type=Erroneous initiation; Sequence=CAB72321.1; Type=Erroneous initiation;
PDB structures from and Proteopedia : 2BP1 (3D)
 
Secondary accessions : O75749 Q5TG63
REFSEQ proteins: NP_003680.2 ENSEMBL proteins: ENSP00000394328 ENSP00000235835 ENSP00000419936 ENSP00000417891 ENSP00000339084 Human Recombinant Proteins 2 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
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AKR7A2 for ontologies About GeneDecksing Antibodies for AKR7A2: Assays for AKR7A2:
Protein
Domains/ Families for AKR7A2 gene(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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AKR7A2 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry O43488 ProtoNet protein and cluster: O43488
UniProtKB/Swiss-Prot: ARK72_HUMAN, O43488 Similarity : Belongs to the aldo/keto reductase 2 family
Gene Function for AKR7A2 gene
(According to MGI May 08 2010, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Millipore ,
Abnova ,
siRNAs from
Applied Biosystems ,
Sigma-Aldrich , Clones from
Millipore ,
Sigma-Aldrich ,
OriGene ,
Sino Biological ,
Ontologies according to Gene Ontology Consortium 01 May 2010 via
Entrez Gene .)
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User Feedback UniProtKB/Swiss-Prot: ARK72_HUMAN, O43488 Function : Catalyzes the NADPH-dependent reduction of succinic semialdehyde to gamma-hydroxybutyrate. May have animportant role in producing the neuromodulator gamma-hydroxybutyrate (GHB). Has broad substrate specificity. Has NADPH-dependent aldehyde reductase activity towards 2-carboxybenzaldehyde, 2-nitrobenzaldehyde and pyridine-2-aldehyde (in vitro). Can reduce 1,2-naphthoquinone and 9,10-phenanthrenequinone (in vitro). Can reduce the dialdehyde protein-binding form of aflatoxin B1 (AFB1) to the non-binding AFB1 dialcohol. May be involved in protection of liver against the toxic and carcinogenic effects of AFB1, a potent hepatocarcinogen Biophysicochemical properties : Kinetic parameters: KM=20 uM for succinic semialdehyde; KM=17 uM for2-carboxybenzaldehyde; KM=8 uM for 9,10-phenanthrenequinone; KM=102 uM for 1,2-naphthoquinone; Enzyme Number (IUBMB): EC 1.1.1.n11
Genatlas biochemistry entry for AKR7A2 :aldo-ketoreductase 7,homolog of rattus norvegicus gene,expressed in brain,heart,lung,prostate,skeletal,muscle,spleen,testis,stomach,pancreas,kidney,liver,also expressed in renal carcinoma cells,involved in endogenous detoxication pathway,catalyzing the recuction of 2-carboxybenzaldehyde (2-CBA) and related molecules 4 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0004032 aldehyde reductase activity
TAS 9576847 GO:0009055 electron carrier activity
TAS 9576847 GO:0016491 oxidoreductase activity
IEA -- GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
IEA --
About this table
AKR7A2 for ontologies About GeneDecksing Animal Models: 1 MGI phenotypic allele for Akr7a5 (no phenotypes)
AKR7A2 for phenotypes About GeneDecksing Pathways & Interactions for AKR7A2 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
Applied Biosystems GeneAssist ,
KEGG
and/or UniProtKB ,
(map by GeneGo ),
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 May 2010 via
Entrez Gene) .
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AKR7A2 for pathways About GeneDecksing 1 Millipore Pathway for AKR7A2 5/6 Sigma-Aldrich "Your Favorite Gene" Pathways for AKR7A2 (Your Favorite Gene powered by Ingenuity) (see all 6
) Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for AKR7A2 5/12 Interacting proteins for AKR7A2 (ENSP00000235835 3 O43488 2 ) via UniProtKB, MINT, and/or STRING (see all 12
) About this table 3 Gene Ontology (GO) biological process terms (GO ID links to tree view) :
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AKR7A2 for ontologies About GeneDecksing
Drugs & Compounds for AKR7A2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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AKR7A2 for compounds About GeneDecksing Browse Tocris compounds for AKR7A2 10/31 Novoseek chemical compound relationships for AKR7A2 gene (see all 31
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
succinic semialdehyde
13.88
5
11597610 (2), 19164088 (1), 12604212 (1), 10510318 (1)
ethoxyquin
13.88
5
8665510 (2), 9823300 (1), 9679543 (1), 8923030 (1)
aflatoxin b1
11.81
7
8923030 (2), 18752886 (2), 18416522 (1), 12727802 (1) (see all 5 )
3h-1,2-dithiole-3-thione
8.72
3
14555609 (2), 19695238 (1)
2-carboxybenzaldehyde
7.28
2
9576847 (1), 10510318 (1)
gamma-hydroxybutyrate
7.10
4
19164088 (1), 19013439 (1), 12071861 (1), 11597610 (1)
oltipraz
7.04
3
8923030 (1), 8665510 (1), 8538186 (1)
1,2-naphthoquinone
6.02
2
10510318 (2)
9,10-phenanthrenequinone
5.43
2
8665510 (1), 10510318 (1)
coumarin
5.22
3
10706111 (3)
About this table
Transcripts for AKR7A2 gene(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 223 Homo sapiens; Apr 2 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Primers from
OriGene and/or
SABiosciences , Expression Assays from Applied Biosystems )About This Section
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User Feedback Assays: Applied Biosystems TaqMan® Gene Expression Assays: NM_003689 Clones: Origene GFP tagged cDNA clones in CMV expression vector: AKR7A2 Origene Myc/DDK tagged cDNA clones in CMV expression vector: AKR7A2 Origene untagged cDNA clones in CMV expression vector: AKR7A2
Primers: Origene genome-wide validated SYBR primer pairs: AKR7A2 SABiosciences RT2 qPCR Primer Assay for AKR7A2: PPH23419A
REFSEQ mRNAs for AKR7A2 gene: NM_003689.2
Additional cDNA sequence: AF026947.1 AK225267.1 AK303131.1 BC004111.2 BC007352.2 BC010852.1 BC011586.1 BC012171.1 BC013996.2 BT007347.1 CR597954.1 CR603343.1 CR606608.1 CR606766.1 CR610843.1 CR614593.1 CR617181.1 CR618917.1 CR625016.1 Y16675.1
10 DOTS entries : DT.99981202 DT.316608 DT.95167811 DT.91771027 DT.121444740 DT.97847734 DT.97847733 DT.91939708
DT.75116548 DT.91771037 24/333 AceView cDNA sequences (see all 333
):
NM_003689 CR606766 BI759101 BK000395 BQ435451 BI835445 BM829901 BM701761 BU542750 CR606608 AA353925 BC011586 BX401279 AF026947 BU944847 BX281656 AA422120 CR614593 BC013996 BQ021710 BQ233440 BM707873 Y16675 CR617181
highest scoring ESTs for AKR7A2 :AF026947 AA054854 AA130934 AA459751 AI923514 AL577881 BE781162 BE784300 BE838741 BE873161 Unigene Cluster for AKR7A2:
Aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) Hs.571886 [show with all ESTs ] Unigene Representative Sequence: NM_003689 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for AKR7A2 ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b SP1 :                   SP2 :       -            
About this scheme ECgene alternative splicing isoforms for AKR7A2 6 Ensembl transcripts including schematic representations : ENST00000424403
ENST00000235835
ENST00000489286
ENST00000481966
ENST00000492217
ENST00000330072
Expression for AKR7A2 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 223 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems ,
Primers from
OriGene and/or
SABiosciences
)
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User Feedback AKR7A2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for AKR7A2 1 / 2 / 3
5 probe-sets matching AKR7A2 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
32510_at2 , 3
U95-A
3
1.00
0.90
1.00
1.00
AF026947
1.00
0.90
0.95
1
214259_s_at2 , 3
U133-A
1
1.00
1.00
--
--
AI144075
0.20
1.00
0.72
1
202139_at2 , 3
U133-A
1
1.00
1.00
--
--
NM_003689
0.60
1.00
0.82
1
214259_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
202139_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
About this table
AKR7A2 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CATTATTTTT SOURCE GeneReport for Unigene cluster: Hs.571886 Expression variation in blood from EXPOLDB for AKR7A2
UniProtKB/Swiss-Prot: ARK72_HUMAN, O43488 Tissue specificity : Detected in brain, liver, small intestine and testis, and at lower levels in heart, prostate,skeletal muscle and spleen. Detected in kidney proximal and distal tubules, endothelial cells lining the Bowman's capsules and some cysts. Detected at low levels in lung and pancreas (at protein level). Widely expressed
Primers: Origene genome-wide validated SYBR primer pairs: AKR7A2 SABiosciences RT2 qPCR Primer Assay for AKR7A2: PPH23419A
Orthologs for AKR7A2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI May 08 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for AKR7A2 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for AKR7A2 ENSEMBL Gene Tree for AKR7A2 Paralogs for AKR7A2 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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User Feedback Paralogs for AKR7A2 gene KCNAB1 2 AKR7A3 2 KCNAB3 2 AKR7L 2 KCNAB2 2
AKR7A2 for paralogs About GeneDecksing Pseudogenes 1 related pseudogene
Genomic Variants for AKR7A2 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for AKR7A2 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for AKR7A2: --
Disorders & Mutations for AKR7A2 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
BCGD,
and/or TGDB .)
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AKR7A2 for disorders About GeneDecksing
OMIM: 603418 10/11 Novoseek disease relationships for AKR7A2 gene (see all 11
)
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Medical News for AKR7A2 gene (Possibly Related Articles in
Doctor's Guide )
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User Feedback --
Publications for AKR7A2 gene (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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User Feedback 10/27 PubMed articles for AKR7A2 gene (see all 27
): Molecular cloning, expression and catalytic activity of a human AKR7 member of the aldo-keto reductase superfamily: evidence that the major 2-carboxybenzaldehyde reductase from human liver is a homologue of rat aflatoxin B1-aldehyde reductase. (PubMed id 9576847) 1, 2, 3 , 4 Ireland L.S.... Hayes J.D. (1998) Genetic variation of Aflatoxin B1 aldehyde reductase genes (AFAR) in human tumour cells. (PubMed id 18752886) 1, 3 , 4 Praml C....Henrich K.O. (2008) Cloning of the human aflatoxin B1-aldehyde reductase gene at 1p35- 1p36.1 in a region frequently altered in human tumor cells. (PubMed id 9823300) 1, 3 , 4 Praml C.... Schwab M. (1998) Novel homodimeric and heterodimeric rat gamma-hydroxybutyrate synthases that associate with the Golgi apparatus define a distinct subclass of aldo-keto reductase 7 family proteins. (PubMed id 12071861) 1, 3 , 4 Kelly V.P.... Hayes J.D. (2002) Synthesis and catabolism of gamma-hydroxybutyrate in SH-SY5Y human neuroblastoma cells: role of the aldo-keto reductase AKR7A2. (PubMed id 17591773) 3 , 4 Lyon R.C....Ellis E.M. (2007) The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414) 3 , 4 Gregory S.G.... Bentley D.R. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3 , 4 Gerhard D.S....Malek J. (2004) Aflatoxin B1 aldehyde reductase (AFAR) genes cluster at 1p35-1p36.1 in a region frequently altered in human tumour cells. (PubMed id 12879023) 1, 3 Praml C.... Schwab M. (2003) Major differences exist in the function and tissue-specific expression of human aflatoxin B1 aldehyde reductase and the principal human aldo-keto reductase AKR1 family members. (PubMed id 10510318) 1, 4 O'connor T....Hayes J.D. (1999) Proteomic analysis of pancreatic ductal adenocarcinoma compared with normal adjacent pancreatic tissue and pancreatic benign cystadenoma. (PubMed id 19077459) 1, 3 Cui Y....Han J. (2009)
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Specialized Databases showing AKR7A2 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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User Feedback Patent Information for AKR7A2 gene: Search GeneIP for patents involving AKR7A2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search Services for AKR7A2 gene (Reagents available from Applied Biosystems , Antibodies and assays by Cell
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