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Aliases for AKR1C8P Gene

Aliases for AKR1C8P Gene

  • Aldo-Keto Reductase Family 1, Member C8, Pseudogene 2 3
  • Aldo-Keto Reductase Family 1, Member C-Like 1 2 3
  • AKR1CL1 3 4
  • Aldo-Keto Reductase Family 1 Member C-Like Protein 1 4
  • Protein RAKc 3
  • EC 1.1.1.- 4

External Ids for AKR1C8P Gene

Previous HGNC Symbols for AKR1C8P Gene

  • AKR1CL1

Summaries for AKR1C8P Gene

GeneCards Summary for AKR1C8P Gene

AKR1C8P (Aldo-Keto Reductase Family 1, Member C8, Pseudogene) is a Pseudogene. GO annotations related to this gene include oxidoreductase activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AKR1C8P Gene

Genomics for AKR1C8P Gene

Genomic Location for AKR1C8P Gene

Chromosome:
10
Start:
5,154,143 bp from pter
End:
5,185,187 bp from pter
Size:
31,045 bases
Orientation:
Minus strand

Genomic View for AKR1C8P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AKR1C8P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AKR1C8P Gene

No data available for Regulatory Elements for AKR1C8P Gene

Proteins for AKR1C8P Gene

  • Protein details for AKR1C8P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T2L2-AKCL1_HUMAN
    Recommended name:
    Putative aldo-keto reductase family 1 member C8
    Protein Accession:
    Q5T2L2
    Secondary Accessions:
    • A6NF66
    • Q6ZN81

    Protein attributes for AKR1C8P Gene

    Size:
    129 amino acids
    Molecular mass:
    14588 Da
    Quaternary structure:
    No Data Available

neXtProt entry for AKR1C8P Gene

Proteomics data for AKR1C8P Gene at MOPED

Post-translational modifications for AKR1C8P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AKR1C8P Gene

Domains & Families for AKR1C8P Gene

Protein Domains for AKR1C8P Gene

Suggested Antigen Peptide Sequences for AKR1C8P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5T2L2

UniProtKB/Swiss-Prot:

AKCL1_HUMAN :
  • Belongs to the aldo/keto reductase family.
Family:
  • Belongs to the aldo/keto reductase family.
genes like me logo Genes that share domains with AKR1C8P: view

No data available for Gene Families for AKR1C8P Gene

Function for AKR1C8P Gene

Enzyme Numbers (IUBMB) for AKR1C8P Gene

Gene Ontology (GO) - Molecular Function for AKR1C8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016491 oxidoreductase activity IEA --
genes like me logo Genes that share ontologies with AKR1C8P: view
genes like me logo Genes that share phenotypes with AKR1C8P: view

No data available for Molecular function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AKR1C8P Gene

Localization for AKR1C8P Gene

Subcellular locations from UniProtKB/Swiss-Prot for AKR1C8P Gene

Cytoplasm.

Gene Ontology (GO) - Cellular Components for AKR1C8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
genes like me logo Genes that share ontologies with AKR1C8P: view

No data available for Subcellular locations from COMPARTMENTS for AKR1C8P Gene

Pathways & Interactions for AKR1C8P Gene

SuperPathways for AKR1C8P Gene

No Data Available

Interacting Proteins for AKR1C8P Gene

Gene Ontology (GO) - Biological Process for AKR1C8P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0055114 oxidation-reduction process IEA --
genes like me logo Genes that share ontologies with AKR1C8P: view

No data available for Pathways by source and SIGNOR curated interactions for AKR1C8P Gene

Drugs & Compounds for AKR1C8P Gene

No Compound Related Data Available

Transcripts for AKR1C8P Gene

mRNA/cDNA for AKR1C8P Gene

(1) REFSEQ mRNAs :
(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AKR1C8P Gene

No ASD Table

Relevant External Links for AKR1C8P Gene

GeneLoc Exon Structure for
AKR1C8P
ECgene alternative splicing isoforms for
AKR1C8P

Expression for AKR1C8P Gene

mRNA expression in normal human tissues for AKR1C8P Gene

Protein differential expression in normal tissues from HIPED for AKR1C8P Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for AKR1C8P Gene



genes like me logo Genes that share expression patterns with AKR1C8P: view

Protein tissue co-expression partners for AKR1C8P Gene

- Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for AKR1C8P Gene

Orthologs for AKR1C8P Gene

Evolution for AKR1C8P Gene

ENSEMBL:
Gene Tree for AKR1C8P (if available)
TreeFam:
Gene Tree for AKR1C8P (if available)

No data available for Orthologs for AKR1C8P Gene

Paralogs for AKR1C8P Gene

No data available for Paralogs for AKR1C8P Gene

Variants for AKR1C8P Gene

Sequence variations from dbSNP and Humsavar for AKR1C8P Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs198594 -- 5,176,886(-) CCCAT(C/T)GTCTC intron-variant
rs878766 -- 5,163,474(+) ACCTC(A/C)CTGTG intron-variant
rs915136 -- 5,163,894(-) GTAGT(C/T)ATGGG intron-variant
rs915137 -- 5,163,423(-) AATGA(C/T)AGAAC intron-variant
rs970557 -- 5,186,782(-) GCACC(A/G/T)CATAA upstream-variant-2KB

Variation tolerance for AKR1C8P Gene

Gene Damage Index Score: 7.10; 80.51% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for AKR1C8P Gene

HapMap Linkage Disequilibrium report
AKR1C8P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for AKR1C8P Gene

Disorders for AKR1C8P Gene

Relevant External Links for AKR1C8P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AKR1C8P
genes like me logo Genes that share disorders with AKR1C8P: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AKR1C8P Gene

Publications for AKR1C8P Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 2 67
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for AKR1C8P Gene

Sources for AKR1C8P Gene

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