AKR1C2 Gene
protein-coding GIFtS : 61
GCID: GC10 M005021
aldo-keto reductase family 1, member C2 (Previous names: aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase... ) (Previous symbol: DDH2 )
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Aliasesfor AKR1C2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Aldo-Keto Reductase Family 1, Member C2 1 2 HBAB2 DD21 2 3 5 SRXY82 DDH21 2 3 5 Aldo-Keto Reductase Family 1 Member C22 HAKRD1 2 5 Dihydrodiol Dehydrogenase 2; Bile Acid Binding Protein; 3-Alpha HydroxysteroidDehydrogenase, Type III2 BABP1 2 Pseudo-Chlordecone Reductase2 DD1 2 Type II Dihydrodiol Dehydrogenase2 MCDR21 2 EC 1.-.-.-3 Chlordecone Reductase Homolog HAKRD2 3 EC 1.1.1.2133 Trans-1,2-Dihydrobenzene-1,2-Diol Dehydrogenase2 3 EC 1.3.1.203 3-Alpha-HSD31 Dihydrodiol Dehydrogenase 23 DD-22 3 Dihydrodiol Dehydrogenase/Bile Acid-Binding Protein3 DD/BABP2 3 Type III 3-Alpha-Hydroxysteroid Dehydrogenase3 Aldo-Keto Reductase Family 1, Member C2 (Dihydrodiol Dehydrogenase 2; Bile AcidBinding Protein; 3-Alpha Hydroxysteroid Dehydrogenase, Type III)1 EC 1.1.18 AKR1C-Pseudo1
Export aliases for AKR1C2 gene to outside databases Previous GC identifers: GC10M005079 GC10M004991 GC10M004985
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Summariesfor AKR1C2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for AKR1C2 : This gene encodes a member of the aldo/keto reductase superfamily, which consists of more than 40 known enzymes and proteins. These enzymes catalyze the conversion of aldehydes and ketones to their corresponding alcohols using NADH and/or NADPH as cofactors. The enzymes display overlapping but distinct substrate specificity. This enzyme binds bile acid with high affinity, and shows minimal 3-alpha-hydroxysteroid dehydrogenase activity. This gene shares high sequence identity with three other gene members and is clustered with those three genes at chromosome 10p15-p14. Three transcript variants encoding two different isoforms have been found for this gene. (provided by RefSeq, Dec 2011) UniProtKB/Swiss-Prot: AK1C2_HUMAN, P52895 Function : Works in concert with the 5-alpha/5-beta-steroid reductases to convert steroid hormones into the3-alpha/5-alpha and 3-alpha/5-beta-tetrahydrosteroids. Catalyzes the inactivation of the most potent androgen 5-alpha-dihydrotestosterone (5-alpha-DHT) to 5-alpha-androstane-3-alpha,17-beta-diol (3-alpha-diol). Has a high bile-binding ability
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Genomic Viewsfor AKR1C2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000010.10 NC_018921.1 NT_008705.16 Regulatory elements: Search SABiosciences Regulatory transcription factor binding sites for AKR1C2 Other transcription factors Search SABiosciences Chromatin IP Primers for AKR1C2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AKR1C2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 10p15-p14 Ensembl cytogenetic band: 10p15.1 HGNC cytogenetic band: 10p15-p14 AKR1C2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 10 GeneLoc Exon Structure
GeneLoc location for GC10M005021: view genomic region
(about GC identifiers )
Start:
5,029,967 bp from pter
End:
5,060,207 bp from pter
Size:
30,241 bases
Orientation:
minus strand
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Proteinsfor AKR1C2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: AK1C2_HUMAN, P52895 (See
protein sequence )Recommended Name: Aldo-keto reductase family 1 member C2 Size : 323 amino acids; 36735 Da
Subcellular location : Cytoplasm (Potential)
5 PDB 3D structures from and Proteopedia for AKR1C2 :1IHI (3D)
  1J96 (3D)
  1XJB (3D)
  2HDJ (3D)
  2IPJ (3D)
 
Secondary accessions : A8K2N9 B4DKR9 Q14133 Q5SR16 Q7M4N1 Q96A71Alternative splicing : 2 isoforms : P52895-1 P52895-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for AKR1C2: NX_P52895 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P52895 2 DME Specific Peptides for AKR1C2 (P52895 ) AKR1C2 Protein expression data from MOPED and PaxDb : About this image REFSEQ proteins (3 alternative transcripts):
NP_001128713.1 NP_001345.1 NP_995317.1 ENSEMBL proteins: ENSP00000370129 ENSP00000392694 ENSP00000385221 ENSP00000408440 Human Recombinant Protein Products for AKR1C2: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005737 cytoplasm
IEA --
AKR1C2 for ontologies About GeneDecksing AKR1C2 Antibody Products: Assay Products for AKR1C2:
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Protein
Domains / Familiesfor AKR1C2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
AKR1C2 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P52895 ProtoNet protein and cluster: P52895
1 Blocks protein family : IPB001395 Aldo/keto reductase UniProtKB/Swiss-Prot: AK1C2_HUMAN, P52895 Similarity : Belongs to the aldo/keto reductase family
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Functionfor AKR1C2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory ,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase ,
shRNA from
OriGene ,
Sirion Biotech ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Sirion Biotech ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
Sirion Biotech ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Molecular Function: UniProtKB/Swiss-Prot Summary: AK1C2_HUMAN, P52895 Function : Works in concert with the 5-alpha/5-beta-steroid reductases to convert steroid hormones into the3-alpha/5-alpha and 3-alpha/5-beta-tetrahydrosteroids. Catalyzes the inactivation of the most potent androgen 5-alpha-dihydrotestosterone (5-alpha-DHT) to 5-alpha-androstane-3-alpha,17-beta-diol (3-alpha-diol). Has a high bile-binding ability Catalytic activity : Trans-1,2-dihydrobenzene-1,2-diol + NADP(+) = catechol + NADPHCatalytic activity : A 3-alpha-hydroxysteroid + NAD(P)(+) = a 3-oxosteroid + NAD(P)HEnzyme regulation : Inhibited by hexestrol with an IC(50) of 2.8 uM, 1,10-phenanthroline with an IC(50) of 2100 uM,1,7-phenanthroline with an IC(50) of 1500 uM, flufenamic acid with an IC(50) of 0.9 uM, indomethacin with an IC(50) of 75 uM, ibuprofen with an IC(50) of 6.9 uM, lithocholic acid with an IC(50) of 0.07 uM, ursodeoxycholic acid with an IC(50) of 0.08 uM and chenodeoxycholic acid with an IC(50) of 0.13 uM Biophysicochemical properties : Kinetic parameters: KM=260 uM for (s)-tetralol; KM=520 uM for (s)-indan-1-ol; KM=5000 uMfor benzene dihydrodiol; KM=1 uM for 5-beta-pregnane-3-alpha,20-alpha-diol; KM=208 uM for 9-alpha,11-beta-PGF2; KM=0.3 uM for 5-beta-androstane-3,17-dione; KM=79 uM for PGD2;
Genatlas biochemistry entry for AKR1C2 : aldo-keto reductase family 1,member C2 (3-alpha hydroxysteroid dehydrogenase,type III),mainly expressed in liver,also in other tissues,with high affinity binding for bile acids,also catalyzing detoxification of polycyclic aromatic hydrocarbons Enzyme Numbers (IUBMB): EC 1.3.1.20 1 EC 1.1.1 2 EC 1.1.1.213 1 EC 1.-.-.- 1 Gene Ontology (GO): 5/10 molecular function terms (GO ID links to tree view) (see all 10 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0004032 alditol:NADP+ 1-oxidoreductase activity
IDA -- GO:0004958 prostaglandin F receptor activity
IDA 18508192 GO:0016491 oxidoreductase activity
-- -- GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
IDA -- GO:0018636 phenanthrene 9,10-monooxygenase activity
IDA --
AKR1C2 for ontologies About GeneDecksing Phenotypes: 1 GenomeRNAi human phenotype for AKR1C2 :Animal Models: Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): AKR1C2 (NM_001135241 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for AKR1C2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat AKR1C2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AKR1C2
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Pathways & Interactionsfor AKR1C2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Naphthalene metabolism 2 Steroid hormone biosynthesis 3 Drug metabolism - cytochrome P450 4 Biological oxidations
Pathway sources See GeneCards unified pathways Show all pathways 1 EMD Millipore Pathway for AKR1C2 1 GeneGo (Thomson Reuters) Pathway for AKR1C2 2 BioSystems Pathways for AKR1C2 2
Kegg Pathways (Kegg details for AKR1C2) :
AKR1C2 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for AKR1C2 STRING Interaction
Network Preview (showing 2 interactants - click image to see more details)2 Interacting proteins for AKR1C2 (ENSP00000370129 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 5/12 biological process terms (GO ID links to tree view) (see all 12 ): About this table
AKR1C2 for ontologies About GeneDecksing
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Drugs & Compoundsfor AKR1C2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
AKR1C2 for compounds About GeneDecksing Browse Tocris compounds for AKR1C2 10/12 HMDB Compounds for AKR1C2 (see all 12 ) About this table Compound Synonyms
CAS
# PubMed Ids Androstanedione 5a-Androsta-3,17-dione (see all 11 ) 846-46-8 -- Androsterone (3R,5S,8R,9S,10S,13S,14S)-3-hydroxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,14,15,16-tetradecahydrocyclopenta[a]phenanthren-17-one (see all 28 ) 53-41-8 -- Chenodeoxycholic acid (+)-chenodeoxycholate (see all 13 ) 474-25-9 -- Ibuprofen alpha-(4-Isobutylphenyl)propionate (see all 9 ) 15687-27-1 -- Lithocholic acid (3a,5b)-3-hydroxy-cholan-24-oate (see all 5 ) 434-13-9 -- NAD 3-Carbamoyl-1-D-ribofuranosylpyridinium hydroxide 5'-ester with adenosine 5'-pyrophosphate (see all 28 ) 53-84-9 -- NADH 1,4-Dihydronicotinamide adenine dinucleotide (see all 17 ) 58-68-4 -- NADP Adenine-nicotinamide dinucleotide phosphate (see all 18 ) 53-59-8 -- NADPH 2'-(dihydrogen phosphate) 5'-(trihydrogen pyrophosphate) Adenosine 5'-ester with 1,4-dihydro-1-b-D-ribofuranosylnicotinamide (see all 23 ) 53-57-6 -- Pyrocatechol 1,2-Dihydroxybenzene (see all 20 ) 120-80-9 --
4 DrugBank Compounds for AKR1C2 About this table 10/25 Novoseek chemical compound relationships for AKR1C2 gene (see all 25 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
3alpha-hydroxysteroid
94.4
14
12416991 (1), 18252781 (1), 8546681 (1), 12539226 (1) (see all 13 )
5alpha-androstane-3alpha,17beta-diol
91.2
9
18252781 (1), 12539226 (1), 12810547 (1), 12604227 (1) (see all 7 )
dihydroprogesterone
83.1
2
15494612 (1)
dihydrotestosterone
80.1
39
17283174 (6), 12810547 (4), 12604227 (4), 19258517 (3) (see all 12 )
chlordecone
77.9
5
7789999 (2), 10619355 (1), 8172617 (1)
bile acid
77.6
4
10619355 (1), 8172617 (1), 15026176 (1)
hydroxysteroid
75.3
2
16455123 (2)
5alpha-dihydroprogesterone
72.7
3
11995921 (2)
androstenedione
71.6
1
14671194 (1)
testosterone
63.3
14
17283174 (3), 18252781 (1), 12810547 (1), 20056642 (1) (see all 10 )
Search CenterWatch for drugs/clinical trials and news about AKR1C2 / AK1C2
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Transcriptsfor AKR1C2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
Sirion Biotech ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for AKR1C2 gene (3 alternative transcripts): NM_001135241.2 NM_001354.5 NM_205845.2 Unigene Cluster for AKR1C2:
Aldo-keto reductase family 1, member C2 Hs.567256 [show with all ESTs ] Unigene Representative Sequence: NM_001354 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000380753 (uc009xhy.3 uc001ihs.3 uc001iht.3 ) ENST00000460124 (uc010qao.2 )ENST00000421196 ENST00000407674 ENST00000455190 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 (see all 3 )OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 3 ): AKR1C2 (NM_001135241 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for AKR1C2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat AKR1C2
Additional cDNA sequence: AB209017.1 AK290304.1 AK296419.1 AK296686.1 AK308385.1 BC007024.1 BC063574.1 M33376.1 U05598.1
24/28 DOTS entries (see all 28 ): DT.92462965 DT.91810606
DT.100889730 DT.92462917 DT.97776113 DT.92027039 DT.100889726 DT.100889732 DT.121225152 DT.97855879 DT.40217695 DT.75180336 DT.429915 DT.100889725 DT.437774 DT.91931968 DT.92462948 DT.101985543 DT.121225011 DT.121225128 DT.91835807 DT.100031708 DT.100889727 DT.121225233 24/261 AceView cDNA sequences (see all 261 ):
CA308355 AW873138 AU280039 F30876 CB122734 CB134192 BE439903 CB157186 CB115985 BG289110 CD368175 BU617644 BQ932644 BM787660 BE786673 CA431705 CB118635 CA309808 BC007024 BQ182205 NM_205845 CB118669 AB031084 BM975692 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for AKR1C2 About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 SP1 :                           SP2 :                   -         SP3 :         -                   SP4 :                          
ECgene alternative splicing isoforms for AKR1C2
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Expression for AKR1C2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section AKR1C2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: -- About this image AKR1C2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table
See AKR1C2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for AKR1C2 SOURCE GeneReport for Unigene cluster: Hs.567256 UniProtKB/Swiss-Prot: AK1C2_HUMAN, P52895 Tissue specificity : Expressed in fetal testes. Expressed in fetal and adult adrenal glands SABiosciences Custom PCR Arrays for AKR1C2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for AKR1C2Browse OriGene validated miRNA SYBR primer pairs Search SABiosciences RT2 qPCR
Primer Assays in human, mouse, rat AKR1C2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat AKR1C2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat AKR1C2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AKR1C2
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Orthologsfor AKR1C2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for AKR1C2 gene from 6/22 species (see all 22 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
lizard (Anolis carolinensis)
Reptilia
--
--
40(a)
possible ortholog
AAWZ02039178(2232-9058)
African clawed frog (Xenopus laevis)
Amphibia
MGC535042
similar to hydroxysteroid (17-beta) dehydrogenase 5
75.62(n)
 
BC044678.1
zebrafish (Danio rerio)
Actinopterygii
zgc:566226
zgc:56622
43(a)
possible ortholog
18(12660381-12669534)
fruit fly (Drosophila melanogaster)
Insecta
CG60843
aldehyde reductase
50(a) (best of 7)
 
68C15 --
thale cress (Arabidopsis thaliana)
eudicotyledons
AT1G599501
NAD(P)-linked oxidoreductase-like protein
51.48(n) 44.44(a)
 
842289 NM_104687.1 NP_176203.1
rice (Oryza sativa)
Liliopsida
Os04g04477001
hypothetical protein
47.97(n) 40.96(a)
 
4335976 NM_001059453.1 NP_001052918.1
ENSEMBL Gene Tree for AKR1C2 (if available)TreeFam Gene Tree for AKR1C2 (if available)
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Paralogsfor AKR1C2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for AKR1C2 gene AKR1C1 1 2 AKR1C3 2 AKR1CL1 2 AKR1B10 2 AKR1A1 2 AKR1E2 2 AKR1C4 2 AKR1B15 2 AKR1B1 2 AKR1D1 2 11 SIMAP similar genes for AKR1C2 using alignment to 3 protein entries: AK1C2_HUMAN (see all proteins ):AKR1C3 AKR1C4 AKR1C1 AKR1CL1 AKR1D1 AKR1B1 AKR1B15 AKR1B10 AKR1A1 AKR1E2 LOC402299
AKR1C2 for paralogs About GeneDecksing
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Genomic Variantsfor AKR1C2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 10 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for AKR1C2 (5029967 - 5060207 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for AKR1C2 1 Inversion : 59908 Human Gene Mutation Database (HGMD) : AKR1C2 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing AKR1C2
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Disorders
/ Diseasesfor AKR1C2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
AKR1C2 for disorders About GeneDecksing
OMIM gene information: 600450
OMIM disorders : --UniProtKB/Swiss-Prot: AK1C2_HUMAN, P52895
Defects in AKR1C2 are a cause of 46,XY sex reversal type 8 (SRXY8) [MIM:614279]. A disorder of sex development. Affected individuals have a 46,XY karyotype but present as phenotypically normal females 20/23 diseases for AKR1C2 (see all 23 ): About MalaCards obesity, hyperphagia, and developmental delay xy sex reversal sex reversal disorders of sex development barrett's esophagus alcoholism ovarian endometriosis squamous cell carcinoma obesity endometriosis hepatitis b prostate cancer breast cancer liver cancer ovarian carcinoma carcinoma breast carcinoma lung cancer prostatitis hepatitis 1 disease from the University of Copenhagen DISEASES database for AKR1C2 :Hepatitis B 7 Novoseek disease relationships for AKR1C2 gene About this table
Human Genome Epidemiology (HuGE) Navigator: AKR1C2 (5 documents) Export disorders for AKR1C2 gene to outside databases
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Publicationsfor AKR1C2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for AKR1C2 gene, integrated from 9 sources (see all 125 ): (articles sorted by number of sources associating them with AKR1C2) Utopia : connect your pdf to the dynamic world of online information
Sequence of the cDNA of a human dihydrodiol dehydrogenase isoform (AKR1C2) and tissue distribution of its mRNA. (PubMed id 9716498) 1 , 2 , 3, 9 Shiraishi H.... Hara A. (1998) Human type 3 3alpha-hydroxysteroid dehydrogenase (aldo-keto reductase 1C2) and androgen metabolism in prostate cells. (PubMed id 12810547) 1 , 7, 9 Rizner T.L....Penning T.M. (2003) Crystal structure of human type III 3alpha-hydroxysteroid dehydrogenase/bile acid binding protein complexed with NADP(+) and ursodeoxycholate. (PubMed id 11513593) 1 , 2 , 9 Jin Y....Lewis M. (2001) Close kinship of human 20alpha-hydroxysteroid dehydrogenase gene with three aldo-keto reductase genes. (PubMed id 10672042) 1 , 2 , 9 Nishizawa M.... Ito S. (2000) Relationship of human liver dihydrodiol dehydrogenases to hepatic bile-acid-binding protein and an oxidoreductase of human colon cells. (PubMed id 8573067) 1 , 2 , 9 Hara A....Ishida N. (1996) Structure of the human 3alpha-hydroxysteroid dehydrogenase type 3 in complex with testosterone and NADP at 1.25-A resolution. (PubMed id 11514561) 1 , 2 , 9 Nahoum V.... Lin S.X. (2001) Structure of a gene coding for human dihydrodiol dehydrogenase/bile acid-binding protein. (PubMed id 7959017) 1 , 2 , 9 Qin K.-N.... Cheng K.-C. (1994) Kinetics of allopregnanolone formation catalyzed by human 3 alpha-hydroxysteroid dehydrogenase type III (AKR1C2). (PubMed id 12416991) 1 , 7, 9 Trauger J.W....LoGrasso P.V. (2002) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004)
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External Searches for AKR1C2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing AKR1C2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing AKR1C2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing AKR1C2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for AKR1C2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for AKR1C2 gene: Search GeneIP for patents involving AKR1C2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor AKR1C2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 and Sirion Biotech , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript , LifeMap BioReagents , and Sirion Biotech , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences , In Situ Hybridization Assays from Advanced Cell Diagnostics , Animal models from inGenious Targeting Laboratory )About This Section
Browse OriGene Antibodies OriGene shRNA RFP for AKR1C2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for AKR1C2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for AKR1C2 OriGene Protein Over-expression Lysate for AKR1C2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for AKR1C2 OriGene 3'-UTR Clone for AKR1C2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for AKR1C2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for AKR1C2 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for AKR1C2 OriGene Custom Protein Services for AKR1C2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat AKR1C2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing AKR1C2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AKR1C2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat AKR1C2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat AKR1C2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat AKR1C2
Search Tocris compounds for AKR1C2
AKR1C2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AKR1C2
Search ThermoFisher Antibodies for AKR1C2
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat AKR1C2
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