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AIDA Gene

protein-coding   GIFtS: 48
GCID: GC01M222841

Axin Interactor, Dorsalization Associated

(Previous name: chromosome 1 open reading frame 80)
(Previous symbol: C1orf80)
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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
Axin Interactor, Dorsalization Associated1 2
C1orf801 2 3
Axin Interaction Partner And Dorsalization Antagonist1 2 3
Chromosome 1 Open Reading Frame 801
Axin Interactor, Dorsalization-Associated Protein2

External Ids:    HGNC: 257611   Entrez Gene: 648532   Ensembl: ENSG000001860637   OMIM: 6123755   UniProtKB: Q96BJ33   

Export aliases for AIDA gene to outside databases

Previous GC identifers: GC01M220907 GC01M193515


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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GeneCards Summary for AIDA Gene:
AIDA (axin interactor, dorsalization associated) is a protein-coding gene. GO annotations related to this gene include protein domain specific binding.

UniProtKB/Swiss-Prot: AIDA_HUMAN, Q96BJ3
Function: Acts as a ventralizing factor during embryogenesis. Inhibits axin-mediated JNK activation by binding
axin and disrupting axin homodimerization. This in turn antagonizes a Wnt/beta-catenin-independent dorsalization
pathway activated by AXIN/JNK-signaling (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000001.10  NC_018912.2  NT_004487.20  
Regulatory elements:
   Regulatory transcription factor binding sites in the AIDA gene promoter:
         RP58   MAZR   Pax-6   NRSF form 1   MyoD   NRSF form 2   AREB6   POU2F1   POU2F1b   POU2F1a   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidAIDA promoter sequence
   Search Chromatin IP Primers for AIDA

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat AIDA


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 1q41   Ensembl cytogenetic band:  1q41   HGNC cytogenetic band: 1q41

AIDA Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
AIDA gene location

GeneLoc information about chromosome 1         GeneLoc Exon Structure

GeneLoc location for GC01M222841:  view genomic region     (about GC identifiers)

Start:
222,841,355 bp from pter      End:
222,886,552 bp from pter
Size:
45,198 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., eBioscience, and/or antibodies-online,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., eBioscience, and/or antibodies-online, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, antibodies-online, and/or others.)
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UniProtKB/Swiss-Prot: AIDA_HUMAN, Q96BJ3 (See protein sequence)
Recommended Name: Axin interactor, dorsalization-associated protein  
Size: 306 amino acids; 35023 Da
Subunit: Interacts with AXIN1 (By similarity)
Secondary accessions: A8K1F0 Q49A81 Q5JRA4 Q658P1 Q9H9E8
Alternative splicing: 3 isoforms:  Q96BJ3-1   Q96BJ3-2   Q96BJ3-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for AIDA: NX_Q96BJ3

Explore proteomics data for AIDA at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus

  • See AIDA Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_073742.2  
    ENSEMBL proteins: 
     ENSP00000339161   ENSP00000347964   ENSP00000442882  

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    antibodies-online proteins for AIDA (6 products) 

     
    antibodies-online peptides for AIDA

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    2 InterPro protein domains:
     IPR023421 AIDA_N
     IPR025939 Aida_C

    Graphical View of Domain Structure for InterPro Entry Q96BJ3

    ProtoNet protein and cluster: Q96BJ3

    UniProtKB/Swiss-Prot: AIDA_HUMAN, Q96BJ3
    Similarity: Belongs to the AIDA family


    Find genes that share domains with AIDA           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: AIDA_HUMAN, Q96BJ3
    Function: Acts as a ventralizing factor during embryogenesis. Inhibits axin-mediated JNK activation by binding
    axin and disrupting axin homodimerization. This in turn antagonizes a Wnt/beta-catenin-independent dorsalization
    pathway activated by AXIN/JNK-signaling (By similarity)

         Gene Ontology (GO): 2 molecular function terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515protein binding ----
    GO:0019904protein domain specific binding IEA--
         
    Find genes that share ontologies with AIDA           About GenesLikeMe


    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for AIDA
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    Block miRNA regulation of human, mouse, rat AIDA using miScript Target Protectors
    Selected qRT-PCR Assays for microRNAs that regulate AIDA (see all 14):
    hsa-miR-345 hsa-miR-448 hsa-miR-187* hsa-miR-631 hsa-miR-137 hsa-miR-657 hsa-miR-513a-5p hsa-miR-27a
    SwitchGear 3'UTR luciferase reporter plasmidAIDA 3' UTR sequence
    Inhib. RNA
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    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    cytosol2
    nucleus2
    cytoskeleton1

    Gene Ontology (GO): 2 cellular component terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005575cellular_component ND--
    GO:0005737cytoplasm IEA--

    Find genes that share ontologies with AIDA           About GenesLikeMe


    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for AIDA
    Interactions:

        Search GeneGlobe Interaction Network for AIDA

    STRING Interaction Network Preview (showing 1 interactants - click image to see more details)

    3 Interacting proteins for AIDA (Q96BJ32, 3 ENSP000003391614) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PINX1Q96BK52, 3MINT-8266612 I2D: score=2 
    PLEKHF2Q9H8W43I2D: score=1 
    SOX7ENSP000003019214STRING: ENSP00000301921
    About this table

    Gene Ontology (GO): 4 biological process terms:    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0009953dorsal/ventral pattern formation ISS--
    GO:0043496regulation of protein homodimerization activity ISS--
    GO:0043508negative regulation of JUN kinase activity IDA17681137
    GO:0046329negative regulation of JNK cascade ISS--

    Find genes that share ontologies with AIDA           About GenesLikeMe



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for AIDA



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for AIDA gene: 
    NM_022831.2  

    Unigene Clusters for AIDA:

    Axin interactor, dorsalization associated
    Hs.156625  [show with all ESTs], Hs.534965  [show with all ESTs]
    Unigene Representative Sequences: AK289865, BC043142
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000340020(uc001hnn.3 uc010pus.2) ENST00000474863(uc001hno.3)
    ENST00000355727 ENST00000495670 ENST00000470437 ENST00000497112 ENST00000541237

    miRNA
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    Selected qRT-PCR Assays for microRNAs that regulate AIDA (see all 14):
    hsa-miR-345 hsa-miR-448 hsa-miR-187* hsa-miR-631 hsa-miR-137 hsa-miR-657 hsa-miR-513a-5p hsa-miR-27a
    SwitchGear 3'UTR luciferase reporter plasmidAIDA 3' UTR sequence
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      QuantiTect SYBR Green Assays in human, mouse, rat AIDA
      QuantiFast Probe-based Assays in human, mouse, rat AIDA

    Additional mRNA sequence: 

    AF131838.1 AK022868.1 AK301870.1 AL833718.1 BC015535.1 BC043142.1 BC067805.1 BC171848.1 

    Selected DOTS entries (see all 37):

    DT.91691294  DT.97797499  DT.118949  DT.121340539  DT.121340556  DT.120772688  DT.121340511  DT.121340509 
    DT.95165330  DT.121340560  DT.121340586  DT.100009524  DT.102834232  DT.121340578  DT.121395293  DT.121395257 
    DT.95165352  DT.121340515  DT.121340546  DT.121395345  DT.121395229  DT.121395294  DT.102834231  DT.120772678 

    Selected AceView cDNA sequences (see all 304):

    AA292615 AA971960 AA970479 BQ477291 AI630593 AI630444 BP371815 BG231620 
    BQ218184 AK022868 AA359977 BE348667 CB215251 AI339046 BQ945685 AA290965 
    CF551915 AI129737 BU153696 BF793679 AI751447 BQ100748 AW936167 AU132187 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    AIDA expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: TAATTTTTCT
    AIDA Expression
    About this image

    AIDA Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    AIDA Protein Expression

    SOURCE GeneReport for Unigene clusters: Hs.156625 Hs.534965

    UniProtKB/Swiss-Prot: AIDA_HUMAN, Q96BJ3
    Tissue specificity: Widely expressed in adult tissues, with highest expression in the heart and skeletal muscle

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of chordates.

    Orthologs for AIDA gene from Selected species (see all 13)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Aida1 , 5 axin interactor, dorsalization associated1, 5 93.01(n)1
    96.39(a)1
      15
    1089091  NM_181732.41  NP_859421.11 
     1832970605 
    chicken
    (Gallus gallus)
    Aves AIDA1 axin interactor, dorsalization associated 87.15(n)
    95.1(a)
      421335  NM_001277540.1  NP_001264469.1 
    lizard
    (Anolis carolinensis)
    Reptilia AIDA6
    axin interactor, dorsalization associated
    84(a)
    1 ↔ 1
    1(244472758-244496057)
    African clawed frog
    (Xenopus laevis)
    Amphibia BC059964.12   -- 78.2(n)    BC059964.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc733272 hypothetical protein MGC73327 76.59(n)   393763  BC059647.1 


    ENSEMBL Gene Tree for AIDA (if available)
    TreeFam Gene Tree for AIDA (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for AIDA gene

    Find genes that share paralogs with AIDA           About GenesLikeMe


    3 Pseudogenes.org Pseudogenes for AIDA
    PGOHUM00000234838 PGOHUM00000240579 PGOHUM00000246117


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for AIDA (see all 734)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 1 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1380405471,2
    C--222841936(+) ACTTAA/GTTGTG 1 -- ut310--------
    rs40117391,2
    C--222842089(+) CATCTA/CACCCA 1 -- ut311Minor allele frequency- C:0.00NA 2
    rs1995891551,2
    --222842919(+) TACCC-/ACAACAGT 1 -- cds10--------
    rs40117401,2
    C--222843059(+) CAGTG-/TGATGTG 1 -- ut310--------
    rs1386916761,2
    --222843128(+) TCTGGG/TTACGG 1 -- ut310--------
    rs1807512171,2
    C--222843331(+) TTGTAC/TCTGTA 2 L syn10--------
    rs1406175741,2
    C--222843371(+) ACATTA/GATAAC 1 -- int10--------
    rs1456843911,2
    --222843418(+) TCAGAA/CGAAAG 1 -- int10--------
    rs7669461,2
    C,O--222843500(-) AAATTA/GAACCT 2 K E mis1 ese32Minor allele frequency- G:0.00NA 4
    rs1842608181,2
    --222843705(+) TTGACA/CAAACA 1 -- int10--------

    HapMap Linkage Disequilibrium report for AIDA (222841355 - 222886552 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 5 variations for AIDA:    About this table    
    Variant IDTypeSubtypePubMed ID
    esv271687CNV Insertion20981092
    esv272318CNV Insertion20981092
    esv1787433CNV Insertion17803354
    esv270291CNV Insertion20981092
    nsv873205CNV Loss21882294

    Site Specific Mutation Identification with PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    OMIM gene information: 612375    OMIM disorders: --


    Find genes that share disorders with AIDA           About GenesLikeMe


    Export disorders for AIDA gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for AIDA gene, integrated from 10 sources (see all 14):
    (articles sorted by number of sources associating them with AIDA)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A beta-catenin-independent dorsalization pathway activated by Axin/JNK signaling and antagonized by aida. (PubMed id 17681137)1, 2, 3 Rui Y.... Lin S.-C. (Dev. Cell 2007)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (Nat. Genet. 2004)
    3. Large-scale concatenation cDNA sequencing. (PubMed id 9110174)1, 3 Yu W.... Gibbs R.A. (Genome Res. 1997)
    4. A "double adaptor" method for improved shotgun library construction. (PubMed id 8619474)1, 3 Andersson B.... Gibbs R.A. (Anal. Biochem. 1996)
    5. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (BMC Syst. Biol. 2011)
    6. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)1 OlA!h J....OvA!di J. (J. Biol. Chem. 2011)
    7. A directed protein interaction network for investigating intracellular signal transduction. (PubMed id 21900206)1 Vinayagam A....Wanker E.E. (Sci Signal 2011)
    8. Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332)2 Mayya V.... Han D.K. (Sci. Signal. 2009)
    9. A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648)2 Dephoure N.... Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008)
    10. The full-ORF clone resource of the German cDNA consortium. (PubMed id 17974005)2 Bechtel S.... Schupp I. (BMC Genomics 2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 64853 HGNC: 25761 AceView: FLJ12806 Ensembl:ENSG00000186063 euGenes: HUgn64853
    ECgene: AIDA H-InvDB: AIDA

    (According to HUGE)
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      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for AIDA Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for AIDA gene:
    Search GeneIP for patents involving AIDA

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, antibodies-online, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory, genOway)
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