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Aliases for AHNAK2 Gene

Aliases for AHNAK2 Gene

  • AHNAK Nucleoprotein 2 2 3 5
  • C14orf78 3 4
  • Chromosome 14 Open Reading Frame 78 2
  • Protein AHNAK2 3
  • KIAA2019 4

External Ids for AHNAK2 Gene

Previous HGNC Symbols for AHNAK2 Gene

  • C14orf78

Previous GeneCards Identifiers for AHNAK2 Gene

  • GC14M104476
  • GC14M105556
  • GC14M105561
  • GC14M085597
  • GC14M105564
  • GC14M105569
  • GC14M105574
  • GC14M105580
  • GC14M105594
  • GC14M105601
  • GC14M105609

Summaries for AHNAK2 Gene

GeneCards Summary for AHNAK2 Gene

AHNAK2 (AHNAK Nucleoprotein 2) is a Protein Coding gene. Diseases associated with AHNAK2 include Hard Palate Cancer. An important paralog of this gene is AHNAK.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AHNAK2 Gene

Genomics for AHNAK2 Gene

Regulatory Elements for AHNAK2 Gene

Enhancers for AHNAK2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F104966 1.7 FANTOM5 Ensembl ENCODE 12.3 +6.1 6088 11.9 PKNOX1 ZFP64 ARID4B SIN3A ZNF48 ZNF2 ZNF121 GLIS2 GATA2 ZNF143 C14orf79 AHNAK2 LINC00638 ENSG00000257270 GPR132 IGHE CEP170B INF2 JAG2 CDCA4
GH14F105058 1.4 FANTOM5 ENCODE 12.3 -84.8 -84829 10.0 HDGF PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 ZNF548 GPR132 AHNAK2 CDCA4 JAG2 NUDT14 ENSG00000257270 C14orf79 C14orf80 PLD4 BRF1
GH14F105013 1.4 Ensembl ENCODE 12 -43.0 -43002 14.8 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC C14orf79 GPR132 AHNAK2 CDCA4 GC14P105029
GH14F104984 1 ENCODE 10.6 -7.2 -7222 2.7 HDGF ATF1 ARID4B SIN3A ELK1 ZNF263 SP3 MXD4 REST RFX3 C14orf79 AHNAK2 GPR132 CRIP2
GH14F105119 0.8 ENCODE 11.3 -140.8 -140762 0.2 HDGF CTCF ESRRA YBX1 RAD21 GATA3 CTBP1 ZNF366 POLR2A ZNF207 AHNAK2 PACS2 BRF1 ENSG00000258154 MIR6765
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around AHNAK2 on UCSC Golden Path with GeneCards custom track

Promoters for AHNAK2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001792818 57 1001 TBP PKNOX1 ZNF76 SIN3A ZNF48 ZEB1 ZNF121 ZNF366 SP3 NFYA
ENSR00001792817 857 201 KLF1 MAZ SIN3A ZNF48 PPARG GLIS1 ZNF600 CHD2 ZBTB20

Genomic Location for AHNAK2 Gene

Chromosome:
14
Start:
104,937,244 bp from pter
End:
104,978,357 bp from pter
Size:
41,114 bases
Orientation:
Minus strand

Genomic View for AHNAK2 Gene

Genes around AHNAK2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AHNAK2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AHNAK2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AHNAK2 Gene

Proteins for AHNAK2 Gene

  • Protein details for AHNAK2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IVF2-AHNK2_HUMAN
    Recommended name:
    Protein AHNAK2
    Protein Accession:
    Q8IVF2
    Secondary Accessions:
    • Q5BKX7
    • Q7Z343
    • Q7Z358
    • Q7Z394
    • Q7Z3G0
    • Q86WQ6
    • Q8IYY1
    • Q8N3G4
    • Q96EX9

    Protein attributes for AHNAK2 Gene

    Size:
    5795 amino acids
    Molecular mass:
    616629 Da
    Quaternary structure:
    • Homodimer (via PDZ domain) (PubMed:24675079). Interacts with DYSF; the interaction is direct and Ca(2+)-independent (PubMed:17185750).
    SequenceCaution:
    • Sequence=AAH49216.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAH90889.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAC23115.1; Type=Frameshift; Positions=3008; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for AHNAK2 Gene

    Alternative splice isoforms for AHNAK2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for AHNAK2 Gene

Post-translational modifications for AHNAK2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for AHNAK2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for AHNAK2 Gene

Domains & Families for AHNAK2 Gene

Gene Families for AHNAK2 Gene

Protein Domains for AHNAK2 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for AHNAK2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IVF2

UniProtKB/Swiss-Prot:

AHNK2_HUMAN :
  • Contains 1 PDZ (DHR) domain.
Domain:
  • Contains 1 PDZ (DHR) domain.
genes like me logo Genes that share domains with AHNAK2: view

Function for AHNAK2 Gene

Gene Ontology (GO) - Molecular Function for AHNAK2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 17185750
genes like me logo Genes that share ontologies with AHNAK2: view
genes like me logo Genes that share phenotypes with AHNAK2: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for AHNAK2 Gene

Localization for AHNAK2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for AHNAK2 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for AHNAK2 gene
Compartment Confidence
plasma membrane 5
cytosol 5
nucleus 4

Gene Ontology (GO) - Cellular Components for AHNAK2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005737 cytoplasm NAS 17185750
GO:0005886 plasma membrane IDA --
GO:0030018 Z disc ISS 21940993
GO:0030315 T-tubule NAS 17185750
genes like me logo Genes that share ontologies with AHNAK2: view

Pathways & Interactions for AHNAK2 Gene

SuperPathways for AHNAK2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for AHNAK2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001778 NOT plasma membrane repair ISS 21940993
genes like me logo Genes that share ontologies with AHNAK2: view

No data available for Pathways by source and SIGNOR curated interactions for AHNAK2 Gene

Transcripts for AHNAK2 Gene

mRNA/cDNA for AHNAK2 Gene

(2) REFSEQ mRNAs :
(15) Additional mRNA sequences :
(12) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AHNAK2 Gene

AHNAK nucleoprotein 2:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for AHNAK2 Gene

No ASD Table

Relevant External Links for AHNAK2 Gene

GeneLoc Exon Structure for
AHNAK2
ECgene alternative splicing isoforms for
AHNAK2

Expression for AHNAK2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AHNAK2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for AHNAK2 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x8.1) and Skin - Not Sun Exposed (Suprapubic) (x7.9).

Protein differential expression in normal tissues from HIPED for AHNAK2 Gene

This gene is overexpressed in Bone marrow stromal cell (11.4), Spinal cord (8.1), and Amniocyte (6.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for AHNAK2 Gene



NURSA nuclear receptor signaling pathways regulating expression of AHNAK2 Gene:

AHNAK2

SOURCE GeneReport for Unigene cluster for AHNAK2 Gene:

Hs.441783
genes like me logo Genes that share expression patterns with AHNAK2: view

Primer Products

No data available for Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for AHNAK2 Gene

Orthologs for AHNAK2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for AHNAK2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia AHNAK2 34 35
  • 93.72 (n)
mouse
(Mus musculus)
Mammalia Ahnak2 34 16
  • 71.83 (n)
dog
(Canis familiaris)
Mammalia LOC490881 34
  • 71.73 (n)
AHNAK2 35
  • 55 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ahnak2 34
  • 69.25 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 44 (a)
OneToMany
-- 35
  • 27 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia AHNAK2 35
  • 29 (a)
OneToOne
chicken
(Gallus gallus)
Aves AHNAK2 34 35
  • 48.52 (n)
lizard
(Anolis carolinensis)
Reptilia -- 35
  • 26 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii ahnak 35
  • 13 (a)
OneToMany
Species where no ortholog for AHNAK2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for AHNAK2 Gene

ENSEMBL:
Gene Tree for AHNAK2 (if available)
TreeFam:
Gene Tree for AHNAK2 (if available)

Paralogs for AHNAK2 Gene

Paralogs for AHNAK2 Gene

genes like me logo Genes that share paralogs with AHNAK2: view

Variants for AHNAK2 Gene

Sequence variations from dbSNP and Humsavar for AHNAK2 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs199974920 Benign 104,952,756(+) TTTCA(A/C)ATCCA reference, missense
rs202246282 Benign 104,950,426(+) ATGGA(C/G)TTGCC reference, missense
rs10133168 -- 104,969,885(+) GATGG(A/G)GCTAC intron-variant
rs10134371 -- 104,957,853(+) GGCTG(A/T)GGCAT intron-variant
rs10134675 -- 104,948,892(+) ACTCA(C/T)GTCGG reference, missense

Structural Variations from Database of Genomic Variants (DGV) for AHNAK2 Gene

Variant ID Type Subtype PubMed ID
nsv952276 CNV deletion 24416366
nsv821194 CNV deletion 20802225
nsv566150 CNV loss 21841781
nsv566144 CNV gain 21841781
nsv566141 CNV gain 21841781
nsv566139 CNV loss 21841781
nsv566099 CNV gain 21841781
nsv473628 CNV novel sequence insertion 20440878
nsv456458 CNV loss 19166990
nsv1438 CNV deletion 18451855
nsv1143619 CNV deletion 24896259
nsv1121883 CNV deletion 24896259
nsv1071178 CNV deletion 25765185
nsv1070015 CNV deletion 25765185
nsv1054574 CNV loss 25217958
nsv1052190 CNV gain 25217958
nsv1049253 CNV gain 25217958
nsv1042303 CNV gain 25217958
esv3635634 CNV gain 21293372
esv3635633 CNV loss 21293372
esv3635632 CNV loss 21293372
esv3635631 CNV loss 21293372
esv3635630 CNV loss 21293372
esv3635629 CNV gain 21293372
esv3552115 CNV deletion 23714750
esv3552114 CNV deletion 23714750
esv3552113 CNV deletion 23714750
esv2749272 CNV deletion 23290073
esv2749271 CNV deletion 23290073
esv2749270 CNV deletion 23290073
esv2749269 CNV deletion 23290073
esv2749268 CNV deletion 23290073
esv2749265 CNV deletion 23290073
esv2749261 CNV deletion 23290073
esv2749259 CNV deletion 23290073
esv2749258 CNV deletion 23290073
esv2749257 CNV deletion 23290073
esv2749256 CNV deletion 23290073
esv2749255 CNV deletion 23290073
esv2749254 CNV deletion 23290073
esv2664692 CNV deletion 23128226
esv2588764 CNV loss 19546169
esv25274 CNV gain 19812545
esv2078334 CNV deletion 18987734
dgv3974n54 CNV gain 21841781
dgv3973n54 CNV gain 21841781
dgv390n67 CNV gain 20364138
dgv283e201 CNV deletion 23290073
dgv282e201 CNV deletion 23290073

Variation tolerance for AHNAK2 Gene

Residual Variation Intolerance Score: 100% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 32.50; 99.94% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for AHNAK2 Gene

Human Gene Mutation Database (HGMD)
AHNAK2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
AHNAK2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for AHNAK2 Gene

Disorders for AHNAK2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for AHNAK2 Gene - From: DISEASES

Disorder Aliases PubMed IDs
hard palate cancer
  • hard palate
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for AHNAK2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AHNAK2
genes like me logo Genes that share disorders with AHNAK2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for AHNAK2 Gene

Publications for AHNAK2 Gene

  1. Periaxin and AHNAK nucleoprotein 2 form intertwined homodimers through domain swapping. (PMID: 24675079) Han H. … Kursula P. (J. Biol. Chem. 2014) 3 4 64
  2. AHNAK, a novel component of the dysferlin protein complex, redistributes to the cytoplasm with dysferlin during skeletal muscle regeneration. (PMID: 17185750) Huang Y. … van der Maarel S.M. (FASEB J. 2007) 3 4 64
  3. The AHNAKs are a class of giant propeller-like proteins that associate with calcium channel proteins of cardiomyocytes and other cells. (PMID: 15007166) Komuro A. … Marchesi V.T. (Proc. Natl. Acad. Sci. U.S.A. 2004) 2 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64

Products for AHNAK2 Gene

Sources for AHNAK2 Gene

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