Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

AGK Gene

protein-coding   GIFtS: 54
GCID: GC07P141250

acylglycerol kinase

(Previous name: multiple substrate lipid kinase )
(Previous symbol: MULK)
 Explore 25 diseases affiliated with
AGK via our new
 Human Malady Compendium 
Biological research products
for AGK
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Acylglycerol Kinase1 2     MTDPS102
MULK1 2 3 5     Acylglycerol Kinase, Mitochondrial2
Multiple Substrate Lipid Kinase1 2 3     HsMuLK3
Multi-Substrate Lipid Kinase2 3     EC 2.7.1.1073
HAGK1     EC 2.7.1.943
FLJ108421     HsMuLK3
CATC52     MuLK3

External Ids:    HGNC: 218691   Entrez Gene: 557502   Ensembl: ENSG000000065307   OMIM: 6103455   UniProtKB: Q53H123   

Export aliases for AGK gene to outside databases

Previous GC identifers: GC07P140899 GC07P135547


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for AGK:
The protein encoded by this gene is a mitochondrial membrane protein involved in lipid and glycerolipid metabolism. The
encoded protein is a lipid kinase that catalyzes the formation of phosphatidic and lysophosphatidic acids. Defects in
this gene have been associated with mitochondrial DNA depletion syndrome 10. (provided by RefSeq, Feb 2012)

UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
Function: Lipid kinase that can phosphorylate both monoacylglycerol and diacylglycerol to form lysophosphatidic acid
(LPA) and phosphatidic acid (PA), respectively. Does not phosphorylate sphingosine. Overexpression increases the
formation and secretion of LPA, resulting in transactivation of EGFR and activation of the downstream MAPK signaling
pathway, leading to increased cell growth

Gene Wiki entry for AGK


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.1  NT_007914.15  NT_079596.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the AGK gene promoter:
         oct-B3   GATA-3   Pbx1a   AML1a   Lmo2   HNF-3beta   GATA-2   GATA-1   Evi-1   AREB6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): AGK promoter sequence
   Search SABiosciences Chromatin IP Primers for AGK

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AGK


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7q34   Ensembl cytogenetic band:  7q34   HGNC cytogenetic band: 7q34

AGK Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
AGK gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P141250:  view genomic region     (about GC identifiers)

Start:
141,250,989 bp from pter      End:
141,355,044 bp from pter
Size:
104,056 bases      Orientation:
plus strand

2 alternative locations:
Chr7+,CRA_TCAG 140,588,796-140,691,918      Chr7+,PATCHES 141,330,680-141,351,205     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12 (See protein sequence)
Recommended Name: Acylglycerol kinase, mitochondrial precursor  
Size: 422 amino acids; 47137 Da
Cofactor: Magnesium
Subcellular location: Mitochondrion membrane
Miscellaneous: Overexpressed in prostate cancer, suggesting that it may play a role in initiation and progression of
prostate cancer, processes in which LPA plays key roles
Secondary accessions: Q75KN1 Q96GC3 Q9NP48
Alternative splicing: 2 isoforms:  Q53H12-1   Q53H12-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for AGK: NX_Q53H12

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q53H12

  • AGK Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_060708.1  
    ENSEMBL proteins: 
     ENSP00000347581   ENSP00000420776   ENSP00000420540   ENSP00000418789   ENSP00000418101  
     ENSP00000444349  

    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: AGK
    OriGene Custom Protein Services for AGK 
    GenScript Custom Purified and Recombinant Proteins Services for AGK
    Novus Biologicals AGK Proteins
    Novus Biologicals AGK Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for AGK

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005739mitochondrion ----
    GO:0016020membrane ----
    GO:0031966mitochondrial membrane IEA--


    AGK for ontologies           About GeneDecksing



    AGK Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    OriGene Antibodies: AGK
    OriGene Custom Antibody Services for AGK 
    GenScript Custom Superior Antibodies Services for AGK
    Novus Biologicals AGK Antibodies
    Abcam antibodies for AGK 
    Uscn Antibodies for AGK
    ThermoFisher Antibody for AGK

    Assay Products for AGK: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for AGK
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for AGK


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    AGK for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001206 Diacylglycerol_kinase_cat_dom

    Graphical View of Domain Structure for InterPro Entry Q53H12

    ProtoNet protein and cluster: Q53H12

    UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
    Similarity: Contains 1 DAGKc domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
    Function: Lipid kinase that can phosphorylate both monoacylglycerol and diacylglycerol to form lysophosphatidic acid
    (LPA) and phosphatidic acid (PA), respectively. Does not phosphorylate sphingosine. Overexpression increases the
    formation and secretion of LPA, resulting in transactivation of EGFR and activation of the downstream MAPK signaling
    pathway, leading to increased cell growth
    Catalytic activity: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate
    Catalytic activity: ATP + 1,2-diacylglycerol = ADP + 1,2-diacyl-sn-glycerol 3-phosphate

    Enzyme Numbers (IUBMB): EC 2.7.1.1071 EC 2.7.1.941

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: AGK
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat AGK
    8/19 QIAGEN miScript miRNA Assays for microRNAs that regulate AGK (see all 19):
    hsa-miR-411* hsa-miR-16-2* hsa-miR-379* hsa-miR-4328 hsa-miR-15a hsa-miR-424 hsa-miR-133a hsa-miR-204
    SwitchGear 3'UTR luciferase reporter plasmidAGK 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for AGK (see all 7)
    OriGene shRNA RFP: AGK
    OriGene siRNA: AGK
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat AGK

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for AGK

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for AGK (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for AGK (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: AGK (NM_017567)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for AGK
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat AGK 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for AGK
    Search LifeMap BioReagents cell lines for AGK

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AGK

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001727lipid kinase activity ----
    GO:0001729ceramide kinase activity IEA--
    GO:0003951NAD+ kinase activity ----
    GO:0004143diacylglycerol kinase activity IEA--
    GO:0005524ATP binding IEA--


    AGK for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Glycerolipid metabolism
    Glycerolipid metabolism1.00
    2Metabolism
    Metabolic pathways0.38

    Pathway sources
    See GeneCards unified pathways
    Show all pathways



    2         Kegg Pathways  (Kegg details for AGK):
        Glycerolipid metabolism
    Metabolic pathways

    UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
    Pathway: Lipid metabolism; glycerolipid metabolism


    AGK for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for AGK

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/264 Interacting proteins for AGK (Q53H122, 3 ENSP000003475814) via UniProtKB, MINT, STRING, and/or I2D (see all 264)

    InteractantInteraction Details
    GeneCardExternal ID(s)
    HCKP086312, 3, ENSP000003650124MINT-65152 I2D: score=3 STRING: ENSP00000365012
    SNX4O952192, 3, ENSP000002517754MINT-65151 I2D: score=3 STRING: ENSP00000251775
    ICT1Q141972, 3, ENSP000003015854MINT-8079030 I2D: score=1 STRING: ENSP00000301585
    PDLIM1O001512, 3, ENSP000003603054MINT-65150 I2D: score=3 STRING: ENSP00000360305
    MYCP011063, ENSP000003672074I2D: score=1 STRING: ENSP00000367207
    About this table

    Gene Ontology (GO): 4 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway IEA--
    GO:0046486glycerolipid metabolic process IEA--
    GO:0046513ceramide biosynthetic process IEA--
    GO:0046834lipid phosphorylation ----


    AGK for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    AGK for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for AGK

    10/928 HMDB Compounds for AGK (see all 928)    About this table
    CompoundSynonyms CAS #PubMed Ids
    2-Arachidonylglycerol2-Arachidonyl glycerol;(all-Z)-2-hydroxy-1-(hydroxymethyl)ethyl ester 5,8,11,14-Eicosatetraenoic acid (see all 21)53847-30-6--
    DG(14:0/14:0/0:0)DAG(14:0/14:0) (see all 9)----
    DG(14:0/14:1(9Z)/0:0)DAG(14:0/14:1) (see all 15)----
    DG(14:0/15:0/0:0)Diacylglycerol(29:0) (see all 9)----
    DG(14:0/16:0/0:0)DAG(30:0) (see all 9)----
    DG(14:0/16:1(9Z)/0:0)DG(30:1) (see all 15)----
    DG(14:0/18:0/0:0)DG(14:0/18:0) (see all 9)----
    DG(14:0/18:1(11Z)/0:0)Diacylglycerol (see all 15)----
    DG(14:0/18:1(9Z)/0:0)1-myristoyl-2-oleoyl-sn-glycerol (see all 15)----
    DG(14:0/18:2(9Z,12Z)/0:0)DAG(14:0/18:2n6) (see all 15)----
    10/38 Novoseek chemical compound relationships for AGK gene (see all 38)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    phosphoinositide 86.2 47 9854311 (1), 11092809 (1), 15044087 (1), 18043260 (1) (see all 44)
    phosphatidylinositol 85.1 70 7612667 (5), 8999962 (2), 8987988 (2), 9748276 (2) (see all 47)
    lipid 84.1 468 7612667 (5), 20035616 (5), 11736661 (4), 8380145 (3) (see all 99)
    wortmannin 76.7 15 9182708 (3), 9139718 (1), 8943387 (1), 9334339 (1) (see all 12)
    ptdins(3)p 75.9 1 18537792 (1)
    phosphatidylinositol-3,4,5-trisphosphate 75.8 6 15242973 (1), 15505410 (1), 19689267 (1), 12734372 (1) (see all 6)
    ly294002 70.1 10 9139718 (1), 17302559 (1), 8943387 (1), 15155829 (1) (see all 8)
    phosphatidylinositol 3-phosphate 68.9 3 2168961 (1), 19841139 (1)
    pip2 62.8 5 15888659 (1), 19689267 (1), 9074761 (1), 11706993 (1)
    sphingosine 62.5 13 15252046 (2), 18638570 (1), 9726979 (1), 17482291 (1) (see all 9)

    Search CenterWatch for drugs/clinical trials and news about AGK 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for AGK gene: 
    NM_018238.3  

    Unigene Cluster for AGK:

    Acylglycerol kinase
    Hs.743318  [show with all ESTs]
    Unigene Representative Sequence: NM_018238
    11 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000355413(uc011krg.1 uc003vwi.2) ENST00000473247 ENST00000495028
    ENST00000473884 ENST00000492693(uc003vwh.2) ENST00000494688 ENST00000465241
    ENST00000496784 ENST00000496273 ENST00000494053 ENST00000535825

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: AGK
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat AGK
    8/19 QIAGEN miScript miRNA Assays for microRNAs that regulate AGK (see all 19):
    hsa-miR-411* hsa-miR-16-2* hsa-miR-379* hsa-miR-4328 hsa-miR-15a hsa-miR-424 hsa-miR-133a hsa-miR-204
    SwitchGear 3'UTR luciferase reporter plasmidAGK 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for AGK (see all 7)
    OriGene shRNA RFP: AGK
    OriGene siRNA: AGK
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat AGK
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for AGK (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for AGK (see all 2)
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: AGK (NM_017567)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for AGK
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat AGK 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for AGK
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat AGK
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat AGK
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat AGK

    Additional cDNA sequence: 

    AJ278150.1 AK001704.1 AK222769.1 AK299131.1 AK304502.1 BC009775.1 BC022777.1 

    10 DOTS entries:

    DT.305637  DT.454358  DT.95080262  DT.97841242  DT.100816647  DT.95096488  DT.121048299  DT.121048356 
    DT.95101623  DT.97815872 

    24/155 AceView cDNA sequences (see all 155):

    BM505176 BM509576 BM461550 BX382024 CR625177 AK001704 AA694449 CR603206 
    AA595754 BM697149 AJ278150 AA446901 BI824671 BM544317 BP365260 BU182711 
    BM917277 BC022777 AA426332 AU133125 BQ440189 NM_018238 AI686706 BM091405 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    AGK expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See AGK Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for AGK

    SOURCE GeneReport for Unigene cluster: Hs.743318

    UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
    Tissue specificity: Highly expressed in muscle, heart, kidney and brain

        SABiosciences Custom PCR Arrays for AGK
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for AGK
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat AGK
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat AGK
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat AGK
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AGK

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for AGK gene from 8/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves AGK1 acylglycerol kinase 75.14(n)
    75.54(a)
      418121  XM_416354.3  XP_416354.1 
    lizard
    (Anolis carolinensis)
    Reptilia AGK6
    --
    72(a)
    1 ↔ 1
    5(16088435-16126489)
    African clawed frog
    (Xenopus laevis)
    Amphibia MGC529202 hypothetical protein MGC52920 73.81(n)    BC043761.1 
    zebrafish
    (Danio rerio)
    Actinopterygii wufi38e092 wufi38e09 75.43(n)   334270  BC045347.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG318731 CG31873 42.86(n)
    28.83(a)
      326168  NM_164906.2  NP_723549.1 
    worm
    (Caenorhabditis elegans)
    Secernentea F52C9.36
    Uncharacterized protein F52C9.3
    18(a)
    1 ↔ 1
    III(5321743-5326307)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ATLCBK16
    Sphingoid long-chain bases kinase 1
    9(a)
    1 ↔ 1
    5(7904708-7909585)
    rice
    (Oryza sativa)
    Liliopsida --
    --
    (see all 3)
    diacylglycerol kinase, putative, expressed
    (see all 3)
    9(a)
    16(a)
    (see all 3)
    1 ↔ many
    1 ↔ many
    (see all 3)
    4(26926040-26933351)
    8(3016359-3021050)


    ENSEMBL Gene Tree for AGK (if available)
    TreeFam Gene Tree for AGK (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for AGK gene
    CERKL2  SPHK12  CERK2  SPHK22  
    1 SIMAP similar gene for AGK using alignment to 4 protein entries:     AGK_HUMAN (see all proteins):
    FLJ10842

    AGK for paralogs           About GeneDecksing


    2 Pseudogenes.org Pseudogenes for AGK
    PGOHUM00000241549 PGOHUM00000233964


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1482 NCBI SNPs in AGK are shown (see all 1482    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs785980721,2
    C,F,--140587564(+) TTTTTT/CTGAAG 1 -- us2k12Minor allele frequency- C:0.07WA EA 238
    rs1112267161,2
    C,--140588073(+) TTTGTC/TCCCAC 1 -- us2k12Minor allele frequency- T:0.07CSA WA 120
    rs731695971,2
    C,--140588155(+) TCTTGG/TTCTCT 1 -- us2k11Minor allele frequency- T:0.50NA 2
    rs69583861,2
    C,F,A,H,--140588177(+) AAGCAC/TCTGTG 1 -- us2k110Minor allele frequency- T:0.02NS EA NA WA 1432
    rs77907421,2
    C,F,A,--140588403(+) tgcacG/Aggccc 1 -- us2k12Minor allele frequency- A:0.02WA NA 238
    rs132423451,2
    C,A,--140588983(+) GAGCGC/GAGTGC 1 -- int16Minor allele frequency- G:0.08MN EA NA CSA WA 1493
    rs1114213541,2
    C,--140589011(+) CGCGCG/TAGCGG 1 -- int11Minor allele frequency- T:0.50WA 2
    rs1124331101,2
    C,--140589160(+) GCCGGC/AGCGGC 1 -- int12Minor allele frequency- A:0.02WA 120
    rs1145953881,2
    C,F,--140591247(+) CCTGAC/TGGTGT 1 -- int11Minor allele frequency- T:0.03WA 118
    rs352789631,2
    C,--140592212(+) CATCAC/TCAAAT 1 -- int15Minor allele frequency- T:0.11NA CSA WA EA 361

    HapMap Linkage Disequilibrium report for AGK (141250989 - 141355044 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for AGK
         2 CNVs: 47923 82201
         1 Indel: 94897
    Human Gene Mutation Database (HGMD): AGK

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing AGK
    DNA2.0 Custom Variant and Variant Library Synthesis for AGK

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    AGK for disorders           About GeneDecksing

    OMIM gene information: 610345    OMIM disorders: --

    UniProtKB/Swiss-Prot: AGK_HUMAN, Q53H12
  • Defects in AGK are the cause of mitochondrial DNA depletion syndrome type 10 (MTDPS10) [MIM:212350]. An
  • autosomal recessive mitochondrial disorder characterized by congenital cataracts, hypertrophic cardiomyopathy,
    skeletal myopathy, exercise intolerance, and lactic acidosis. Mental development is normal, but affected individuals
    may die early from cardiomyopathy
  • Defects in AGK are the cause of cataract, congenital, autosomal recessive type 5 (CATC5) [MIM:614691]. CATC5
  • consists of an opacification of the crystalline lens of the eye becoming evident at birth. It frequently results in
    visual impairment or blindness. Opacities vary in morphology, are often confined to a portion of the lens, and may be
    static or progressive. In general, the more posteriorly located and dense an opacity, the greater the impact on visual
    function

    20/25 diseases for AGK (see all 25):    About MalaCards
    mitochondrial dna depletion syndrome    amyotrophic lateral sclerosis    insulin resistance    lateral sclerosis
    burkitt's lymphoma    pheochromocytoma    multiple myeloma    osteosarcoma
    gout    prostate cancer    fibrosarcoma    myeloma
    hepatocellular carcinoma    nasopharyngitis    retinoblastoma    breast carcinoma
    colorectal cancer    prostatitis    breast cancer    obesity

    9 Novoseek disease relationships for AGK gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cancer 32.2 16 19549252 (2), 19025891 (1), 19368348 (1), 11574762 (1) (see all 10)
    erythroleukemia 21.8 1 7606713 (1)
    tumors 6.37 10 19025891 (1), 19395305 (1), 14729945 (1), 16556064 (1) (see all 7)
    inflammation 1.99 4 19112101 (1), 19641220 (1), 17355200 (1)
    pheochromocytoma 0.784 2 8168074 (1), 7572346 (1)
    insulin resistance 0 1 10768093 (1)
    autoimmune diseases 0 1 17614878 (1)
    osteosarcoma 0 2 8168074 (1), 7572346 (1)
    prostate cancer 0 16 19549252 (4), 16246119 (3), 15939762 (3)

    Human Genome Epidemiology (HuGE) Navigator: AGK (1 document)

    Export disorders for AGK gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for AGK gene, integrated from 9 sources (see all 303):
    (articles sorted by number of sources associating them with AGK)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A novel acylglycerol kinase that produces lysophosphatidic acid modulates cross talk with EGFR in prostate cancer cells. (PubMed id 15939762)1, 2, 3, 9 Bektas M.... Spiegel S. (2005)
    2. MuLK, a eukaryotic multi-substrate lipid kinase. (PubMed id 15252046)1, 3, 9 Waggoner D.W....Bajjalieh S.M. (2004)
    3. Identification of a truncation mutation of acylglycero l kinase (AGK) gene in a novel autosomal recessive cataract locus. (PubMed id 22415731)1, 2 Aldahmesh M.A....Alkuraya F.S. (2012)
    4. Molecular diagnosis of infantile mitochondrial disease with targeted next-generation sequencing. (PubMed id 22277967)1, 2 Calvo S.E.... Mootha V.K. (2012)
    5. Lack of the mitochondrial protein acylglycerol kinase causes Sengers syndrome. (PubMed id 22284826)1, 2 Mayr J.A.... Prokisch H. (2012)
    6. Functions of the multifaceted family of sphingosine k inases and some close relatives. (PubMed id 17135245)1, 3 Spiegel S. and Milstien S. (2007)
    7. Further characterization of mammalian ceramide kinase: substrate delivery and (stereo)specificity, tissue distribution, and subcellular localization studies. (PubMed id 16269826)1, 2 Van Overloop H.... Van Veldhoven P.P. (2006)
    8. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. The DNA sequence of human chromosome 7. (PubMed id 12853948)1, 2 Hillier L.W.... Wilson R.K. (2003)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 55750 HGNC: 21869 AceView: FLJ10842 Ensembl:ENSG00000006530 euGenes: HUgn55750
    ECgene: AGK Kegg: 55750 H-InvDB: AGK

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for AGK Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for AGK gene:
    Search GeneIP for patents involving AGK

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for AGK   OriGene shRNA RFP for AGK  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for AGK   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for AGK  
     OriGene Protein Over-expression Lysate for AGK   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for AGK   OriGene 3'-UTR Clone for AGK  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for AGK   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for AGK  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for AGK   OriGene Custom Protein Services for AGK  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat AGK
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing AGK
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AGK
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat AGK
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat AGK
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat AGK
     GenScript Custom Purified and Recombinant Proteins Services for AGK GenScript cDNA clones with any tag delivered in your preferred vector for AGK
     GenScript Custom Assay Services for AGK GenScript Custom Superior Antibodies Services for AGK
     GenScript Custom overexpressing Cell Line Services for AGK CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in AGK promoter
     Search Chromatin IP Primers for AGK
     RT2 qPCR Primer Assay in human, mouse, rat AGK
     Search GNC Networks for AGK
     SABiosciences Custom PCR Arrays for AGK
     Search Tocris compounds for AGK
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     AGK antibodies
     AGK proteins
     AGK lysates
     Antibodies for AGK
     See all of Abcam's Antibodies, Kits and Proteins for AGK
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     AGK Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for AGK
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AGK
     SwitchGear 3'UTR luciferase reporter plasmids for AGK
     SwitchGear Promoter luciferase reporter plasmids for AGK
     ThermoFisher Antibody for AGK
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat AGK
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      AGK gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4