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Aliases for AGBL5-AS1 Gene

Subcategory (RNA class) for AGBL5-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for AGBL5-AS1 Gene

  • AGBL5 Antisense RNA 1 2 3
  • AGBL5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for AGBL5-AS1 Gene

ORGUL Members for AGBL5-AS1 Gene

Previous GeneCards Identifiers for AGBL5-AS1 Gene

  • GC00U933882
  • GC02M027278

Summaries for AGBL5-AS1 Gene

GeneCards Summary for AGBL5-AS1 Gene

AGBL5-AS1 (AGBL5 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AGBL5-AS1 Gene

Genomics for AGBL5-AS1 Gene

Genomic Location for AGBL5-AS1 Gene

Start:
27,049,683 bp from pter
End:
27,050,264 bp from pter
Size:
582 bases
Orientation:
Minus strand

Genomic View for AGBL5-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AGBL5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AGBL5-AS1 Gene

No data available for Regulatory Elements for AGBL5-AS1 Gene

Proteins for AGBL5-AS1 Gene

Post-translational modifications for AGBL5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AGBL5-AS1 Gene

Domains for AGBL5-AS1 Gene

Gene Families for AGBL5-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AGBL5-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AGBL5-AS1 Gene

Function for AGBL5-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for AGBL5-AS1 Gene

Localization for AGBL5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AGBL5-AS1 Gene

Pathways for AGBL5-AS1 Gene

SuperPathways for AGBL5-AS1 Gene

No Data Available

Interacting Proteins for AGBL5-AS1 Gene

Gene Ontology (GO) - Biological Process for AGBL5-AS1 Gene

None

No data available for Pathways by source for AGBL5-AS1 Gene

Transcripts for AGBL5-AS1 Gene

mRNA/cDNA for AGBL5-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AGBL5-AS1 Gene

No ASD Table

Relevant External Links for AGBL5-AS1 Gene

GeneLoc Exon Structure for
AGBL5-AS1
ECgene alternative splicing isoforms for
AGBL5-AS1

Expression for AGBL5-AS1 Gene

mRNA expression in normal human tissues for AGBL5-AS1 Gene

genes like me logo Genes that share expressions with AGBL5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for AGBL5-AS1 Gene

Orthologs for AGBL5-AS1 Gene

Evolution for AGBL5-AS1 Gene

ENSEMBL:
Gene Tree for AGBL5-AS1 (if available)
TreeFam:
Gene Tree for AGBL5-AS1 (if available)

No data available for Orthologs for AGBL5-AS1 Gene

Paralogs for AGBL5-AS1 Gene

No data available for Paralogs for AGBL5-AS1 Gene

Variants for AGBL5-AS1 Gene

Sequence variations from dbSNP and Humsavar for AGBL5-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs10432697 -- 27,049,184(+) gcctc(C/T)cgagt downstream-variant-500B
rs145045904 -- 27,049,614(+) AGAGC(A/T)GGAAA downstream-variant-500B
rs199982560 -- 27,049,474(+) AACTT(-/TATATC)TAGAA downstream-variant-500B
rs201711440 -- 27,049,472(+) ACAAC(-/TTTATA)TCTAG downstream-variant-500B
rs530426641 -- 27,049,489(+) AACTT(A/C)GGATT downstream-variant-500B

Relevant External Links for AGBL5-AS1 Gene

HapMap Linkage Disequilibrium report
AGBL5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for AGBL5-AS1 Gene

Disorders for AGBL5-AS1 Gene

No disorders were found for AGBL5-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for AGBL5-AS1 Gene

Publications for AGBL5-AS1 Gene

No publications were found for AGBL5-AS1 Gene.

Products for AGBL5-AS1 Gene

Sources for AGBL5-AS1 Gene

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