Free for academic non-profit institutions. Other users need a Commercial license

Aliases for AGAP10P Gene

Aliases for AGAP10P Gene

  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 Pseudogene 2 3 5
  • Centaurin, Gamma-Like Family, Member 10 Pseudogene 2 3
  • Centaurin, Gamma-Like Family, Member 7 2 3
  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 2
  • BA358L16.1 3
  • BA144G6.2 3
  • CTGLF10P 3
  • AGAP10 3
  • CTGLF7 3

External Ids for AGAP10P Gene

Previous HGNC Symbols for AGAP10P Gene

  • AGAP10
  • CTGLF7
  • CTGLF10P

Summaries for AGAP10P Gene

GeneCards Summary for AGAP10P Gene

AGAP10P (ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 Pseudogene) is a Pseudogene. GO annotations related to this gene include GTPase activator activity.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AGAP10P Gene

Genomics for AGAP10P Gene

Regulatory Elements for AGAP10P Gene

Enhancers for AGAP10P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F044932 0.9 Ensembl ENCODE 27.7 -743.6 -743592 5.4 PKNOX1 MLX ZFP64 ARID4B DMAP1 ZNF48 GLIS2 GATA2 ZNF143 ZNF263 TMEM72-AS1 AGAP10P AGAP4 RASSF4 ZNF22 C10orf25 TMEM72 ENSG00000223462 ENSG00000234504
GH10F046522 1 Ensembl ENCODE 18.3 +846.0 846007 3.6 HDGF ARNT SIN3A YBX1 ZNF2 ZNF143 ZNF207 FOS ZNF592 SREBF1 PARGP1 BMS1P1 AGAP4 AGAP9 WASHC2C FAM21FP LOC105378289 AGAP10P ANXA8L1 PTPN20
GH10F045373 0.9 FANTOM5 ENCODE 10.6 -303.5 -303475 4.3 PKNOX1 ZNF121 GLIS2 GATA2 ZNF143 FOS ZNF263 SP3 CBX8 ZNF610 ALOX5 OR13A1 AGAP10P WASHC2C ZFAND4 GC10M045391
GH10F045726 0.2 ENCODE 10.5 +48.6 48637 1.5 ARNT CREB3L1 MLX ARID4B SIN3A FEZF1 ZNF2 CBX5 ZNF207 FOS PARGP1 WASHC2C AGAP4 ZFAND4 LOC105378289 AGAP10P C10orf10 FAM35BP ALOX5 FAM21FP
GH10F046538 1.3 FANTOM5 Ensembl ENCODE 10.5 +861.9 861901 3.2 SIN3A DMAP1 YY1 SCRT2 REST SREBF1 CBX8 SMARCA4 IRF1 KDM1A SYT15 AGAP10P GPRIN2 ANXA8L1 PIR31182 GC10P046518
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around AGAP10P on UCSC Golden Path with GeneCards custom track

Genomic Location for AGAP10P Gene

Chromosome:
10
Start:
45,678,692 bp from pter
End:
45,700,553 bp from pter
Size:
21,862 bases
Orientation:
Plus strand

Genomic View for AGAP10P Gene

Genes around AGAP10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AGAP10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AGAP10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AGAP10P Gene

Proteins for AGAP10P Gene

Post-translational modifications for AGAP10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AGAP10P Gene

Domains & Families for AGAP10P Gene

Gene Families for AGAP10P Gene

Suggested Antigen Peptide Sequences for AGAP10P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AGAP10P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for AGAP10P Gene

Function for AGAP10P Gene

Phenotypes for AGAP10P Gene

genes like me logo Genes that share phenotypes with AGAP10P: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AGAP10P Gene

Localization for AGAP10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AGAP10P Gene

Pathways & Interactions for AGAP10P Gene

SuperPathways for AGAP10P Gene

No Data Available

Interacting Proteins for AGAP10P Gene

Gene Ontology (GO) - Biological Process for AGAP10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AGAP10P Gene

Transcripts for AGAP10P Gene

mRNA/cDNA for AGAP10P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for AGAP10P Gene

No ASD Table

Relevant External Links for AGAP10P Gene

GeneLoc Exon Structure for
AGAP10P
ECgene alternative splicing isoforms for
AGAP10P

Expression for AGAP10P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for AGAP10P Gene

NURSA nuclear receptor signaling pathways regulating expression of AGAP10P Gene:

AGAP10P
genes like me logo Genes that share expression patterns with AGAP10P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for AGAP10P Gene

Orthologs for AGAP10P Gene

Evolution for AGAP10P Gene

ENSEMBL:
Gene Tree for AGAP10P (if available)
TreeFam:
Gene Tree for AGAP10P (if available)

No data available for Orthologs for AGAP10P Gene

Paralogs for AGAP10P Gene

No data available for Paralogs for AGAP10P Gene

Variants for AGAP10P Gene

Variation tolerance for AGAP10P Gene

Gene Damage Index Score: 0.18; 4.09% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for AGAP10P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AGAP10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for AGAP10P Gene

Disorders for AGAP10P Gene

No disorders were found for AGAP10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AGAP10P Gene

Publications for AGAP10P Gene

  1. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets. (PMID: 25277244) Katsogiannou M. … Rocchi P. (Mol. Cell Proteomics 2014) 3 64
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 3 64

Products for AGAP10P Gene

Sources for AGAP10P Gene

Content
Loading form....