Free for academic non-profit institutions. Other users need a Commercial license

Aliases for AGAP10P Gene

Aliases for AGAP10P Gene

  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 Pseudogene 2 3 5
  • Centaurin, Gamma-Like Family, Member 10 Pseudogene 2 3
  • Centaurin, Gamma-Like Family, Member 7 2 3
  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 2
  • BA358L16.1 3
  • BA144G6.2 3
  • CTGLF10P 3
  • AGAP10 3
  • CTGLF7 3

External Ids for AGAP10P Gene

Previous HGNC Symbols for AGAP10P Gene

  • AGAP10
  • CTGLF7
  • CTGLF10P

Summaries for AGAP10P Gene

GeneCards Summary for AGAP10P Gene

AGAP10P (ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 10 Pseudogene) is a Pseudogene. GO annotations related to this gene include GTPase activator activity.

Additional gene information for AGAP10P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AGAP10P Gene

Genomics for AGAP10P Gene

Regulatory Elements for AGAP10P Gene

Enhancers for AGAP10P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H046522 1.4 Ensembl ENCODE 54.8 +846.0 846007 3.6 HDGF ARNT SIN3A YBX1 ZNF2 ZBTB7B ZNF766 ZNF207 ZNF143 FOS PARGP1 BMS1P1 AGAP4 AGAP9 WASHC2C AGAP10P LOC105378289 FAM21FP ZFAND4 FAM35BP
GH10H046555 1.3 Ensembl ENCODE dbSUPER 19.2 +878.0 877998 2.9 HDGF MXI1 ZNF175 SIN3A GLI4 ZIC2 ZFHX2 ZNF791 POLR2A PRDM10 BMS1P1 PARGP1 BMS1P2 AGAP9 WASHC2C AGAP10P AGAP4 ZFAND4 RHEBP1 GPRIN2
GH10H046265 1.3 Ensembl ENCODE dbSUPER 18.5 +590.0 589961 5.4 HDGF PKNOX1 ZNF473 ZSCAN4 TSC22D4 BACH1 MAX CDC5L TCF12 ZFHX2 ANTXRLP1 AGAP10P ZFAND4 AGAP4 ANTXRL ANXA8L1 PIR53286
GH10H044752 1.3 Ensembl ENCODE 14.4 -925.7 -925702 1.2 PKNOX1 FEZF1 GLI4 ZNF2 ZNF121 GLIS2 FOS KLF7 SP3 YY2 WASHC2C FAM21FP ZFAND4 HNRNPA3P1 RPS19P7 ANKRD54P1 RNU6-1207P OR6D1P ENSG00000227029 LINC00841
GH10H045373 1.6 FANTOM5 ENCODE dbSUPER 10.6 -303.5 -303475 4.3 PKNOX1 ZNF121 ZNF766 GLIS2 GATA2 ZNF143 FOS ATF7 RUNX3 SP3 ALOX5 OR13A1 AGAP10P WASHC2C ZFAND4 GC10M045391
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around AGAP10P on UCSC Golden Path with GeneCards custom track

Genomic Locations for AGAP10P Gene

Genomic Locations for AGAP10P Gene
chr10:45,678,692-45,700,553
(GRCh38/hg38)
Size:
21,862 bases
Orientation:
Plus strand
chr10:46,174,140-46,195,981
(GRCh37/hg19)

Genomic View for AGAP10P Gene

Genes around AGAP10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AGAP10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AGAP10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AGAP10P Gene

Proteins for AGAP10P Gene

Post-translational modifications for AGAP10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for AGAP10P Gene

Domains & Families for AGAP10P Gene

Gene Families for AGAP10P Gene

Suggested Antigen Peptide Sequences for AGAP10P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AGAP10P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for AGAP10P Gene

Function for AGAP10P Gene

Phenotypes for AGAP10P Gene

genes like me logo Genes that share phenotypes with AGAP10P: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AGAP10P Gene

Localization for AGAP10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for AGAP10P Gene

Pathways & Interactions for AGAP10P Gene

SuperPathways for AGAP10P Gene

No Data Available

Interacting Proteins for AGAP10P Gene

Gene Ontology (GO) - Biological Process for AGAP10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AGAP10P Gene

Drugs & Compounds for AGAP10P Gene

No Compound Related Data Available

Transcripts for AGAP10P Gene

mRNA/cDNA for AGAP10P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for AGAP10P Gene

No ASD Table

Relevant External Links for AGAP10P Gene

GeneLoc Exon Structure for
AGAP10P
ECgene alternative splicing isoforms for
AGAP10P

Expression for AGAP10P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for AGAP10P Gene

NURSA nuclear receptor signaling pathways regulating expression of AGAP10P Gene:

AGAP10P

Evidence on tissue expression from TISSUES for AGAP10P Gene

  • Nervous system(4.2)
genes like me logo Genes that share expression patterns with AGAP10P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for AGAP10P Gene

Orthologs for AGAP10P Gene

Evolution for AGAP10P Gene

ENSEMBL:
Gene Tree for AGAP10P (if available)
TreeFam:
Gene Tree for AGAP10P (if available)

No data available for Orthologs for AGAP10P Gene

Paralogs for AGAP10P Gene

No data available for Paralogs for AGAP10P Gene

Variants for AGAP10P Gene

Variation tolerance for AGAP10P Gene

Gene Damage Index Score: 0.18; 4.09% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for AGAP10P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
AGAP10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for AGAP10P Gene

Disorders for AGAP10P Gene

No disorders were found for AGAP10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for AGAP10P Gene

Publications for AGAP10P Gene

  1. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets. (PMID: 25277244) Katsogiannou M … Rocchi P (Molecular & cellular proteomics : MCP 2014) 3 60
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 60

Products for AGAP10P Gene

Sources for AGAP10P Gene

Content
Loading form....