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Aliases for AGAP1-IT1 Gene

Subcategory (RNA class) for AGAP1-IT1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for AGAP1-IT1 Gene

  • AGAP1 Intronic Transcript 1 2 3
  • AGAP1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for AGAP1-IT1 Gene

ORGUL Members for AGAP1-IT1 Gene

Previous GeneCards Identifiers for AGAP1-IT1 Gene

  • GC02P236416

Summaries for AGAP1-IT1 Gene

GeneCards Summary for AGAP1-IT1 Gene

AGAP1-IT1 (AGAP1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AGAP1-IT1 Gene

Genomics for AGAP1-IT1 Gene

Genomic Location for AGAP1-IT1 Gene

Start:
235,505,126 bp from pter
End:
235,507,566 bp from pter
Size:
2,441 bases
Orientation:
Plus strand

Genomic View for AGAP1-IT1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AGAP1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AGAP1-IT1 Gene

No data available for Regulatory Elements for AGAP1-IT1 Gene

Proteins for AGAP1-IT1 Gene

Post-translational modifications for AGAP1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AGAP1-IT1 Gene

Domains for AGAP1-IT1 Gene

Gene Families for AGAP1-IT1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with AGAP1-IT1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for AGAP1-IT1 Gene

Function for AGAP1-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for AGAP1-IT1 Gene

Localization for AGAP1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for AGAP1-IT1 Gene

Pathways for AGAP1-IT1 Gene

SuperPathways for AGAP1-IT1 Gene

No Data Available

Interacting Proteins for AGAP1-IT1 Gene

Gene Ontology (GO) - Biological Process for AGAP1-IT1 Gene

None

No data available for Pathways by source for AGAP1-IT1 Gene

Transcripts for AGAP1-IT1 Gene

mRNA/cDNA for AGAP1-IT1 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AGAP1-IT1 Gene

AGAP1 intronic transcript 1 (non-protein coding):
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate AGAP1-IT1
    • Block miRNA regulation of AGAP1-IT1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for AGAP1-IT1

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for AGAP1-IT1 Gene

    No ASD Table

    Relevant External Links for AGAP1-IT1 Gene

    GeneLoc Exon Structure for
    AGAP1-IT1
    ECgene alternative splicing isoforms for
    AGAP1-IT1

    Expression for AGAP1-IT1 Gene

    mRNA expression in normal human tissues for AGAP1-IT1 Gene

    mRNA differential expression in normal tissues according to GTEx for AGAP1-IT1 Gene

    This gene is overexpressed in Liver (7.4) and Colon - Transverse (4.1).

    SOURCE GeneReport for Unigene cluster for AGAP1-IT1 Gene Hs.684184

    genes like me logo Genes that share expressions with AGAP1-IT1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for AGAP1-IT1 Gene

    Orthologs for AGAP1-IT1 Gene

    Evolution for AGAP1-IT1 Gene

    ENSEMBL:
    Gene Tree for AGAP1-IT1 (if available)
    TreeFam:
    Gene Tree for AGAP1-IT1 (if available)

    No data available for Orthologs for AGAP1-IT1 Gene

    Paralogs for AGAP1-IT1 Gene

    No data available for Paralogs for AGAP1-IT1 Gene

    Variants for AGAP1-IT1 Gene

    Relevant External Links for AGAP1-IT1 Gene

    HapMap Linkage Disequilibrium report
    AGAP1-IT1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for AGAP1-IT1 Gene

    Disorders for AGAP1-IT1 Gene

    No disorders were found for AGAP1-IT1 Gene.

    No data available for UniProtKB/Swiss-Prot for AGAP1-IT1 Gene

    Publications for AGAP1-IT1 Gene

    No publications were found for AGAP1-IT1 Gene.

    Products for AGAP1-IT1 Gene

    Sources for AGAP1-IT1 Gene

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