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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

AFF4 Gene

protein-coding   GIFtS: 49
GCID: GC05M132211

AF4/FMR2 family, member 4

 Explore 3 diseases affiliated with
AFF4 via our new
 Human Malady Compendium 
Biological research products
for AFF4
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
AF4/FMR2 Family, Member 41 2     ALL1-Fused Gene From Chromosome 5q31 Protein2 3
AF5Q311 2 3 5     AF4/FMR2 Family Member 42
MCEF1 2 3     Protein AF-5q313
Major CDK9 Elongation Factor-Associated Protein2 3     

External Ids:    HGNC: 178691   Entrez Gene: 271252   Ensembl: ENSG000000723647   OMIM: 6044175   UniProtKB: Q9UHB73   

Export aliases for AFF4 gene to outside databases

Previous GC identifers: GC05M132243 GC05M127403


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for AFF4:
The protein encoded by this gene belongs to the AF4 family of transcription factors involved in leukemia. It is a
component of the positive transcription elongation factor b (P-TEFb) complex. A chromosomal translocation involving
this gene and MLL gene on chromosome 11 is found in infant acute lymphoblastic leukemia with ins(5;11)(q31;q31q23).
(provided by RefSeq, Oct 2011)

UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7
Function: Key component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA
polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA. In the
SEC complex, AFF4 acts as a central scaffold that recruits other factors through direct interactions with ELL proteins
(ELL, ELL2 or ELL3) and the P-TEFb complex. In case of infection by HIV-1 virus, the SEC complex is recruited by the
viral Tat protein to stimulate viral gene expression




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000005.9  NC_018916.1  NT_034772.6  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the AFF4 gene promoter:
         HOXA9B   HOXA9   c-Fos   RFX1   AP-1   Nkx2-5   HNF-3beta   Arnt   c-Jun   Meis-1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidAFF4 promoter sequence
   Search SABiosciences Chromatin IP Primers for AFF4

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat AFF4


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 5q31   Ensembl cytogenetic band:  5q31.1   HGNC cytogenetic band: 5q31

AFF4 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
AFF4 gene location

GeneLoc information about chromosome 5         GeneLoc Exon Structure

GeneLoc location for GC05M132211:  view genomic region     (about GC identifiers)

Start:
132,211,071 bp from pter      End:
132,299,354 bp from pter
Size:
88,284 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7 (See protein sequence)
Recommended Name: AF4/FMR2 family member 4  
Size: 1163 amino acids; 127459 Da
Subunit: Interacts with ELL3; the interaction is direct (By similarity). Interacts with ELL2; the interaction is direct
and leads to stabilize ELL2 and prevent ELL2 ubiquitination and degradation. Component of the super elongation complex
(SEC), at least composed of EAF1, MLLT3/AF9, AFF (AFF1 or AFF4), the P-TEFb complex and ELL (ELL, ELL2 or ELL3).
Interacts with ELL
Subcellular location: Nucleus
Developmental stage: Expressed in fetal heart, lung, brain and to a lower extent liver
Sequence caution: Sequence=AAI00288.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A
sequence; Sequence=BAD92784.1; Type=Erroneous initiation;
Secondary accessions: B2RP19 B7WPD2 Q498B2 Q59FB3 Q6P592 Q8TDR1 Q9P0E4
Alternative splicing: 3 isoforms:  Q9UHB7-1   Q9UHB7-2   Q9UHB7-3   

Explore the universe of human proteins at neXtProt for AFF4: NX_Q9UHB7

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9UHB7

  • AFF4 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_055238.1  
    ENSEMBL proteins: 
     ENSP00000265343   ENSP00000367858   ENSP00000409069   ENSP00000395268  

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    Browse ProSpec Recombinant Proteins
    Uscn Proteins for AFF4

    Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005730nucleolus IDA--
    GO:0005739mitochondrion IDA--


    AFF4 for ontologies           About GeneDecksing



    AFF4 Antibody Products: 
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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    AFF4 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR007797 TF_AF4/FMR2

    Graphical View of Domain Structure for InterPro Entry Q9UHB7

    ProtoNet protein and cluster: Q9UHB7

    1 Blocks protein family: IPB007797 AF-4 proto-oncoprotein

    UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7
    Similarity: Belongs to the AF4 family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7
    Function: Key component of the super elongation complex (SEC), a complex required to increase the catalytic rate of RNA
    polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA. In the
    SEC complex, AFF4 acts as a central scaffold that recruits other factors through direct interactions with ELL proteins
    (ELL, ELL2 or ELL3) and the P-TEFb complex. In case of infection by HIV-1 virus, the SEC complex is recruited by the
    viral Tat protein to stimulate viral gene expression

    miRNA
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    hsa-miR-124* hsa-miR-576-3p hsa-miR-640 hsa-miR-106a hsa-miR-1260b hsa-miR-128 hsa-miR-138-2* hsa-miR-502-3p
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AFF4

    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003700sequence-specific DNA binding transcription factor activity TAS10588740
    GO:0005515protein binding IPI--


    AFF4 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Aff4tm1Nosa for AFF4
         8 MGI mutant phenotypes (inferred from 1 allele(MGI details for Aff4):
     behavior/neurological  embryogenesis  endocrine/exocrine gland  growth/size  hematopoietic system 
     mortality/aging  reproductive system  respiratory system 

    AFF4 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for AFF4

    STRING Interaction Network Preview (showing 5 interactants - click image to see 20)

    5/23 Interacting proteins for AFF4 (Q9UHB71, 2, 3 ENSP000002653434) via UniProtKB, MINT, STRING, and/or I2D (see all 23)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    SIAH1Q8IUQ42, 3, ENSP000003491564MINT-66990 I2D: score=4 STRING: ENSP00000349156
    CCNT1O605631, 3, ENSP000002619004EBI-1384303,EBI-2479671 I2D: score=3 STRING: ENSP00000261900
    MLLT3P425681, 3, ENSP000003696954EBI-1384303,EBI-716132 I2D: score=2 STRING: ENSP00000369695
    MLLT1Q031111, 3, ENSP000002526744EBI-1384303,EBI-1384215 I2D: score=4 STRING: ENSP00000252674
    MED10Q9BTT43, ENSP000002557644I2D: score=1 STRING: ENSP00000255764
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0006366transcription from RNA polymerase II promoter TAS10588740
    GO:0007286spermatid development IEA--


    AFF4 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for AFF4
    Search CenterWatch for drugs/clinical trials and news about AFF4 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for AFF4 gene: 
    NM_014423.3  

    Unigene Cluster for AFF4:

    AF4/FMR2 family, member 4
    Hs.519313  [show with all ESTs]
    Unigene Representative Sequence: NM_014423
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000265343(uc003kyd.3 uc011cxk.2) ENST00000378595(uc003kye.1)
    ENST00000478588 ENST00000378593 ENST00000425658 ENST00000477369 ENST00000491831
    ENST00000465484(uc003kyf.4) ENST00000421773

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    8/163 QIAGEN miScript miRNA Assays for microRNAs that regulate AFF4 (see all 163):
    hsa-miR-124* hsa-miR-576-3p hsa-miR-640 hsa-miR-106a hsa-miR-1260b hsa-miR-128 hsa-miR-138-2* hsa-miR-502-3p
    Browse SwitchGear 3'UTR luciferase reporter plasmids
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    Additional cDNA sequence: 

    AB209547.1 AF161355.1 AF173886.1 AF197927.1 AF213987.2 AK024831.1 AK055638.1 AK126818.1 
    AK307407.1 BC025700.1 BC063007.1 BC100287.1 BC137226.1 BC144538.1 

    21 DOTS entries:

    DT.106700  DT.435243  DT.110034  DT.91746494  DT.97858702  DT.91946025  DT.95207548  DT.40249939 
    DT.40260120  DT.120803242  DT.91746492  DT.95366815  DT.120803256  DT.430967  DT.91651639  DT.95248796 
    DT.100749401  DT.101976043  DT.40112133  DT.91660210  DT.97772394 

    24/238 AceView cDNA sequences (see all 238):

    AI949293 AL044396 BP350261 AI914070 AF173886 BC040454 BQ438036 BQ708661 
    BM449518 BG288429 CN478659 BP343784 BE328052 BQ722836 AK126818 NM_014423 
    BM836800 BM835510 BX503945 BU074576 AI672170 BM718613 AF197927 BU743052 

    GeneLoc Exon Structure

    5 Alternative Splicing Database (ASD) splice patterns (SP) for AFF4    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^
    SP1:                          -                                   -                 -                                               -                           
    SP2:                          -                                   -                 -                                                                           
    SP3:                          -                                                                                                                                 
    SP4:                                                                                                                                                            
    SP5:                                                                                                                                                            

    ExUns: 20 ^ 21 ^ 22 ^ 23
    SP1:                        
    SP2:                        
    SP3:                        
    SP4:                        
    SP5:                        


    ECgene alternative splicing isoforms for AFF4

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    AFF4 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CGTTTAATGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See AFF4 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for AFF4

    SOURCE GeneReport for Unigene cluster: Hs.519313

    UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7
    Tissue specificity: Ubiquitously expressed. Strongly expressed in heart, placenta, skeletal muscle, pancreas and to a
    lower extent in brain

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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for AFF4

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for AFF4 gene from 5/15 species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Aff41 , 5 AF4/FMR2 family, member 41, 5 89.61(n)1
    93.7(a)1
      11 (31.93 cM)5
    937361  NM_033565.21  NP_291043.11 
     533508335 
    chicken
    (Gallus gallus)
    Aves AFF41 AF4/FMR2 family, member 4 82.19(n)
    87.68(a)
      416337  XM_414653.3  XP_414653.1 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    --
    83(a)
    72(a)
    many → 1
    many → 1
    2(127244538-127252197)
    2(127258475-127277595)
    zebrafish
    (Danio rerio)
    Actinopterygii aff41 AF4/FMR2 family, member 4 62.72(n)
    65(a)
      556421  XM_679235.6  XP_684327.5 
    fruit fly
    (Drosophila melanogaster)
    Insecta lilli1 lilliputian 37.85(n)
    25.92(a)
      33496  NM_164517.1  NP_722864.1 


    ENSEMBL Gene Tree for AFF4 (if available)
    TreeFam Gene Tree for AFF4 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for AFF4 gene
    AFF32  AFF12  AFF22  
    4 SIMAP similar genes for AFF4 using alignment to 5 protein entries:     AFF4_HUMAN (see all proteins):
    AFF3    AFF1    AF-4    AFF2

    AFF4 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for AFF4
    PGOHUM00000238196


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1455 NCBI SNPs in AFF4 are shown (see all 1455    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 5 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs578809641,2
    C,F,--132210674(+) GCCAAG/CATCAT 2 -- ds50015Minor allele frequency- C:0.15NA WA EA 246
    rs359739481,2
    C--132210723(+) AAAAA-/AAAAAA 2 -- ds50011Minor allele frequency- A:0.50NA 2
    rs2005972011,2
    C--132210745(-) ACCATC/TTTTTT 2 -- ds50010--------
    rs1414853931,2
    --132210785(+) GGTTTC/GTCTAT 2 -- ds50010--------
    rs16981051,2
    C,F,A,H,--132210849(-) TTGGGC/TTTTCA 2 -- ds50017Minor allele frequency- T:0.37NA CSA WA EA 366
    rs16349591,2
    C,F,O,A,H,--132210852(-) GGCTTG/AGGCTT 2 -- ds500120Minor allele frequency- A:0.45NS EA NA CSA WA 2518
    rs1381935711,2
    --132210978(+) CAGCTA/GGTGGG 2 -- ds50010--------
    rs1440066521,2
    --132211032(+) AGGAAC/TTGCAT 2 -- ds50010--------
    rs1869110631,2
    --132211050(+) GCTCAC/GAGTTG 2 -- ds50010--------
    rs1905136421,2
    --132211075(+) GTACAA/GTGTTC 2 -- ut31 ds50010--------

    HapMap Linkage Disequilibrium report for AFF4 (132211071 - 132299354 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for AFF4: --

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    AFF4 for disorders           About GeneDecksing

    OMIM gene information: 604417    OMIM disorders: --

    UniProtKB/Swiss-Prot: AFF4_HUMAN, Q9UHB7
  • Note=A chromosomal aberration involving AFF4 is found in acute lymphoblastic leukemia (ALL). Insertion
  • ins(5;11)(q31;q13q23) that forms a MLL-AFF4 fusion protein

    3 diseases for AFF4:    About MalaCards
    acute lymphoblastic leukemia    lymphoblastic leukemia    leukemia

    Human Genome Epidemiology (HuGE) Navigator: AFF4 (1 document)

    Export disorders for AFF4 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for AFF4 gene, integrated from 9 sources (see all 50):
    (articles sorted by number of sources associating them with AFF4)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. AF5q31, a newly identified AF4-related gene, is fused to MLL in infant acute lymphoblastic leukemia with ins(5;11)(q31;q13q23). (PubMed id 10588740)1, 2, 3, 9 Taki T.... Hayashi Y. (1999)
    2. The ubiquitin ligase Siah1 controls ELL2 stability and formation of super elongation complexes to modulate gene transcription. (PubMed id 22483617)1, 2 Liu M....Zhou Q. (2012)
    3. HIV-1 Tat and host AFF4 recruit two transcription elo ngation factors into a bifunctional complex for coordinated activation of HIV-1 transcription. (PubMed id 20471948)1, 2 He N....Zhou Q. (2010)
    4. AFF4, a component of the ELL/P-TEFb elongation comple x and a shared subunit of MLL chimeras, can link transcription elongation to le ukemia. (PubMed id 20159561)1, 2 Lin C....Shilatifard A. (2010)
    5. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. MCEF, the newest member of the AF4 family of transcription factors involved in leukemia, is a positive transcription elongation factor-b- associated protein. (PubMed id 12065898)1, 2 Estable M.C....Roeder R.G. (2002)
    8. MCEF is localized to the nucleus by protein sequences encoded within three distinct exons, where it represses HIV-1 Tat-transactivation of LTR-directed transcription. (PubMed id 17389929)1, 9 Niedzielski M.F....Estable M.C. (2007)
    9. HIV-1 Tat recruits transcription elongation factors dispersed along a flexible AFF4 scaffold. (PubMed id 23251033)2 Chou S.... Alber T. (2013)
    10. Targeted ubiquitination and degradation of G-protein-c oupled receptor kinase 5 by the DDB1-CUL4 ubiquitin ligase complex. (PubMed id 22952844)1 Wu Z....Ma L. (2012)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    OMIM
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 27125 HGNC: 17869 AceView: AF5Q31 Ensembl:ENSG00000072364 euGenes: HUgn27125
    ECgene: AFF4 H-InvDB: AFF4

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for AFF4 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for AFF4 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for AFF4 gene:
    Search GeneIP for patents involving AFF4

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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