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ADRA2B Gene

protein-coding   GIFtS: 59

GC02M096200
adrenergic, alpha-2B-, receptor
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbols: ADRA2L1, ADRA2RL1)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
ADRA2L1 2, 3, 5
ADRA2RL1 2, 3
ADRARL1 1, 2
ALPHA2BAR 2
Descriptions
ADRA2B adrenergic, alpha-2B-, receptor 2
Alpha-2 adrenergic receptor subtype C2 3
Alpha-2B adrenoceptor 3
Alpha-2B adrenoreceptor 3
G-protein coupled receptor 2
adrenergic receptor alpha 2B 2
adrenergic, alpha-2B-, receptor 2
alpha-2-adrenergic receptor-like 1 2
alpha-2B-adrenergic receptor 2
External Ids
HGNC: 2821
Entrez Gene: 1512
UniProtKB: P180893
Ensembl: ENSG000002220407
Search outside databases for aliases for ADRA2B gene

Previous GC identifers: GC02M094650 GC02M095232 GC02M096246 GC02M096263

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for ADRA2B:
Alpha-2-adrenergic receptors are members of the G protein-coupled receptor superfamily. They
include 3 highly homologous subtypes: alpha2A, alpha2B, and alpha2C. These receptors have a
critical role in regulating neurotransmitter release from sympathetic nerves and from adrenergic
neurons in the central nervous system. This gene encodes the alpha2B subtype, which was observed
to associate with eIF-2B, a guanine nucleotide exchange protein that functions in regulation of
translation. A polymorphic variant of the alpha2B subtype, which lacks 3 glutamic acids from a
glutamic acid repeat element, was identified to have decreased G protein-coupled receptor
kinase-mediated phosphorylation and desensitization; this polymorphic form is also associated with
reduced basal metabolic rate in obese subjects and may therefore contribute to the pathogenesis of
obesity. This gene contains no introns in either its coding or untranslated sequences. [provided
by RefSeq]

UniProtKB/Swiss-Prot: ADA2B_HUMAN, P18089
Function: Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate
cyclase through the action of G proteins. The rank order of potency for agonists of this receptor
is clonidine > norepinephrine > epinephrine = oxymetazoline > dopamine > p-tyramine =
phenylephrine > serotonin > p-synephrine / p-octopamine. For antagonists, the rank order is
yohimbine > chlorpromazine > phentolamine > mianserine > spiperone > prazosin > alprenolol >
propanolol > pindolol

Gene Wiki entry for ADRA2B (Alpha-2B_adrenergic_receptor)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ADRA2B gene  

Entrez Gene cytogenetic band: 2p13-q13   Ensembl cytogenetic band:  2q11.2   HGNC chromosome: 2

ADRA2B Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 2         GeneLoc Exon Structure

GeneLoc location for GC02M096200:     (about GC identifiers)

Start:
96,142,350 bp from pter
End:
96,145,711 bp from pter
Size:
3,362 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000002.10  NT_026970.9  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: ADA2B_HUMAN, P18089 (See protein sequence)
Recommended Name: Alpha-2B adrenergic receptor  
Size: 450 amino acids; 49954 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :
2CVA (3D)    
Secondary accessions: Q4TUH9 Q53RF2 Q9BZK0

REFSEQ proteins: NP_000673.2  

ENSEMBL proteins: 
ENSP00000387281 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Millipore Purified and/or Recombinant ADRA2B Protein
Browse Human Recombinant Proteins at Sigma-Aldrich  
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (alpha 2b Adrenergic Receptor)
Browse Abnova for Human Recombinant Proteins
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005886 plasma membrane TAS2164221
GO:0005887 integral to plasma membrane TAS2164221
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Antibodies for ADRA2B: 
Browse Antibodies Central at Invitrogen
Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Sigma-Aldrich Antibodies for ADRA2B
Browse R&D Systems for Antibodies
Antibodies from Abcam (alpha 2b Adrenergic Receptor), each with their AbpromiseSM
Browse Abnova for Monoclonal and Polyclonal Antibodies
Search Novus for antibodies for ADRA2B

Assays for ADRA2B: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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5 InterPro domains/families:
 IPR017452 GPCR_Rhodpsn_supfam
 IPR002233 Adrnrgc_rcpt
 IPR015695 Adren_rcpt_A2A/B/C
 IPR000276 7TM_GPCR_Rhodpsn
 IPR000207 Adren_rcpt_A2B


   GeneDecks  ADRA2B for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry P18089

ProtoNet protein and cluster: P18089

2 Blocks protein families:
IPB000207 Alpha-2B adrenergic receptor signature
IPB002233 Adrenergic receptor signature


UniProtKB/Swiss-Prot: ADA2B_HUMAN, P18089
Similarity: Belongs to the G-protein coupled receptor 1 family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADRA2B)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (ADRA2B)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000682

              Applied Biosystems Silencer® siRNAs for ADRA2B

              Sigma-Aldrich siRNA and siRNA Panels for ADRA2B  
                     Sigma-Aldrich shRNA Panels and shRNA for ADRA2B  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Browse Clone Ranger at Invitrogen for clones
Millipore Clones for the Expression of ADRA2B
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000682
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_000682
                                 untagged cDNA clone in CMV expression vector: NM_000682 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_000682

UniProtKB/Swiss-Prot: ADA2B_HUMAN, P18089
Function: Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate
cyclase through the action of G proteins. The rank order of potency for agonists of this receptor
is clonidine > norepinephrine > epinephrine = oxymetazoline > dopamine > p-tyramine =
phenylephrine > serotonin > p-synephrine / p-octopamine. For antagonists, the rank order is
yohimbine > chlorpromazine > phentolamine > mianserine > spiperone > prazosin > alprenolol >
propanolol > pindolol

Genatlas biochemistry entry for ADRA2B:
adrenergic,alpha-2B-,receptor-like 1,G protein coupled receptor superfamily,inhibiting Ca2+
channels,contributing to the patho genesis of obesity

8 MGI mutant phenotypes (inferred from 1 allele(MGI details for Adra2b):

behavior/neurologicalembryogenesishomeostasis/metabolismlethality-postnatal
lethality-prenatal/perinatalrenal/urinary systemreproductive system

5 Gene Ontology (GO) molecular function terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0004872 receptor activity IEA--
GO:0004930 G-protein coupled receptor activity IEA--
GO:0004935 adrenoceptor activity IEA--
GO:0004938 alpha2-adrenergic receptor activity TAS2164221
GO:0005515 protein binding IEA--
About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
About This Section


1 Millipore Pathway for ADRA2B
 Development Alpha-2 adrenergic receptor activation of ERK

   GeneDecks  ADRA2B for the pathways selected above  
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3 Sigma-Aldrich "Your Favorite Gene" Pathways for  ADRA2B  (Your Favorite Gene powered by Ingenuity) 
 G-Protein Coupled Receptor Signaling
 Cardiac Hypertrophy Signaling
 cAMP-mediated Signaling

   GeneDecks  ADRA2B for the pathways selected above  
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1 Kegg Pathway  (Kegg details for ADRA2B):
 hsa04080 Neuroactive ligand-receptor interaction

   GeneDecks  ADRA2B for the pathways selected above  
About GeneDecksing

5 Gene Ontology (GO) biological process terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0000165 MAPKKK cascade IEA--
GO:0001525 angiogenesis IEA--
GO:0007165 signal transduction IEA--
GO:0007186 G-protein coupled receptor protein signaling pathway TAS2164221
GO:0007267 cell-cell signaling TAS2164221
About this table
(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Enzo Life Sciences drugs & compounds for ADRA2B
Sigma-Aldrich Small Molecules for ADRA2B:
Mixed Agonist/Antagonist Antagonist Blocker Agonist

Compounds for ADRA2B available from Tocris Bioscience
CompoundAction CAS number
Imiloxan hydrochlorideHighly selective alpha2B antagonist[81167-16-0]
Guanfacine hydrochloridealpha2A agonist[29110-48-3]
Medetomidine hydrochloridePotent, highly selective alpha2 agonist[106807-72-1]
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4 Novoseek chemical compound relationships for ADRA2B gene
Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
nadh 19.71 3 11158372 (1), 12878463 (1)
sucrose 6.61 1 8170959 (1)
cholesterol 0.00 1 12401126 (1)
glucose 0.00 1 15309292 (1)
About this table


(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADRA2B)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (ADRA2B)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000682

              Sigma-Aldrich siRNA and siRNA Panels for ADRA2B  
                     Sigma-Aldrich shRNA Panels and shRNA for ADRA2B  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_000682  

REFSEQ mRNAs for ADRA2B gene: 

NM_000682.5   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_000682  

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000682
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_000682
                                 untagged cDNA clone in CMV expression vector: NM_000682 

Additional cDNA sequence: 

BC133021.1 BC136537.1 

1 DOTS entry:

DT.40128047 

8 AceView cDNA sequences:

AI791589 NM_000682 BX111005 BF475329 AA887330 AI733093 BQ880026 AW361747 

highest scoring ESTs for ADRA2B:

AI791589 AA887330 AI733093 BQ880026 BX111005 NM_000682 BF475329 CO960636 CO960652 CV806541 

Unigene Cluster for ADRA2B:

Adrenergic, alpha-2B-, receptor
Hs.247686  [show with all ESTs]
Unigene Representative Sequence: NM_000682


GeneLoc Exon Structure

1 Ensembl transcript including schematic representation:
ENST00000409345  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

ADRA2B expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for ADRA2B

1 / 2 / 3

3 probe-sets matching ADRA2B gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

90674_at2, 3 U95-D 2 1.00 0.97 1.00 1.00 AI791589 0.80 1.00 0.91 1

208544_at2, 3 U133-A 1 0.91 1.00 -- -- NM_000682 0.60 1.00 0.82 1

208544_at2 U133Plus2 1 0.91 1.00 -- -- -- -- -- -- --
About this table
Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: --

SOURCE GeneReport for Unigene cluster: Hs.247686
(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for ADRA2B gene from 5/8 species (see all 8 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
ADRA2B1   -- adrenergic, alpha-2B-, receptor 89.19(n)
90.99(a)
611658  XM_849354.1  XP_854447.1 
chimpanzee
(Pan troglodytes)
ADRA2B1   -- adrenergic, alpha-2B-, receptor 98.84(n)
97.86(a)
459410  XM_515627.2  XP_515627.2 
cow
(Bos taurus)
ADRA2B1   -- adrenergic, alpha-2B-, receptor 87.72(n)
88.76(a)
516422  XM_594575.2  XP_594575.2 
rat
(Rattus norvegicus)
Adra2b1   -- adrenergic, alpha-2B-, receptor 84.71(n)
84.56(a)
24174  NM_138505.1  NP_612514.1 
mouse
(Mus musculus)
Adra2b1, 5 2 (71.00 cM)5
adrenergic receptor, alpha 2b1, 5 84.34(n)1
83.89(a)1
115521  NM_009633.31  NP_033763.21 
 AF3320495  AF3320505  (see all 11)
About this table        Species with no ortholog for ADRA2B

ENSEMBL Gene Tree for ADRA2B
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for ADRA2B gene
ADRA2A2  HTR5A2  ADRA2C2  HTR72  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section

UniProtKB/Swiss-Prot: ADA2B_HUMAN, P18089
Polymorphism: A rare polymorphic framshift in position 451 produces a protein of 542 residues


10/71 NCBI SNPs in ADRA2B are shown (see all 71 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 49)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 2 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs44265641,2
A,C,F,H96144713(+) TCCTCT/CTCCTC 2 E/EEEE fra14Minor allele frequency- C:0.28EU EA WA 416
rs38136621,2
C,F,H96143422(-) CACACT/GAGAGA 1 -- ut3112Minor allele frequency- G:0.14EA EU WA MN NA 2335
--
rs49072991,2
A,C,F96143849(+) TTTGTG/TGGTGG 1 -- ut317Minor allele frequency- T:0.33NS MN NA 969
--
rs283650311,2
C,F96144715(-) AGGAGGAAGA   
  GGAG
/-
GAGGA
1 EKRR/E fra12Minor allele frequency- -:0.30--696
rs359947551,2
C,F96143636(-) TGGATC/GGGCTT 1 -- ut312Minor allele frequency- G:0.34MN 141
rs22526971,2
A,C96141917(+) ACCCGC/GGGCTA 1 -- ng510--------
rs290005711,2
C,F96143809(-) AGTGGG/AGCCTG 1 -- ut314Minor allele frequency- A:0.02NS MN 233
rs290005761,2
C,F96142770(-) GTGGAA/GAGGAG 1 -- ut313Minor allele frequency- G:0.05NS NA 136
--
rs93335681,2
C,F96144984(-) CAAGGG/CGGGGC 1 A/G mis15Minor allele frequency- C:0.03EU NS MN 561
--
rs290005691,2
C,F96144490(-) TTGGCG/ATTTTT 1 I/V mis14Minor allele frequency- A:0.01NS MN 233
About this table

HapMap Linkage Disequilibrium images for ADRA2B (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 104260

5 Novoseek disease relationships for ADRA2B gene

Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
resting heart rate 47.90 2 16907703 (1)
essential hypertension 29.03 1 10509541 (1)
glioma 9.19 1 2169434 (1)
myocardial infarction 0.00 1 12401126 (1)
breast cancer 0.00 3 12878463 (1), 12270893 (1)
About this table

Human Gene Mutation Database: ADRA2B
Genetic Association Database: ADRA2B
Human Genome Epidemiology Navigator: ADRA2B (36 documents)

(Possibly Related Articles in Doctor's Guide)
About This Section

  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
About This Section

10/91 PubMed articles for ADRA2B gene (see all 91 ):
(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 151 HGNC: 282 AceView: ADRA2B Ensembl:ENSG00000222040 euGenes: HUgn151
ECgene: ADRA2B H-InvDB: ADRA2B
(According to HUGE)
About This Section

  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

NameDescription
SeattleSNPshttp://pga.gs.washington.edu/data/adra2b/
(Available from WIS Yeda, Salk, Tufts)
About This Section

  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for ADRA2B:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



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 "Your Favorite Gene" Pathwaysfeedback


  
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 Recombinant Proteins
(alpha 2b Adrenergic Receptor)
 Antibodies (alpha 2b Adrenergic Receptor)
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 Tocris compounds for ADRA2B




 Drugs for ADRA2B
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 Search Novus for antibodies for ADRA2B

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