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Aliases for ADPGK-AS1 Gene

Subcategory (RNA class) for ADPGK-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ADPGK-AS1 Gene

  • ADPGK Antisense RNA 1 2 3 5
  • ADPGK Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ADPGK-AS1 Gene

Previous GeneCards Identifiers for ADPGK-AS1 Gene

  • GC15P073075

Summaries for ADPGK-AS1 Gene

GeneCards Summary for ADPGK-AS1 Gene

ADPGK-AS1 (ADPGK Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADPGK-AS1 Gene

Genomics for ADPGK-AS1 Gene

Regulatory Elements for ADPGK-AS1 Gene

Enhancers for ADPGK-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around ADPGK-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ADPGK-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ADPGK-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ADPGK-AS1 Gene

Chromosome:
15
Start:
72,782,835 bp from pter
End:
72,798,199 bp from pter
Size:
15,365 bases
Orientation:
Plus strand

Genomic View for ADPGK-AS1 Gene

Genes around ADPGK-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADPGK-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADPGK-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADPGK-AS1 Gene

Proteins for ADPGK-AS1 Gene

Post-translational modifications for ADPGK-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADPGK-AS1 Gene

Domains & Families for ADPGK-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADPGK-AS1 Gene

Function for ADPGK-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADPGK-AS1 Gene

Localization for ADPGK-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ADPGK-AS1 Gene

Pathways & Interactions for ADPGK-AS1 Gene

SuperPathways for ADPGK-AS1 Gene

No Data Available

Interacting Proteins for ADPGK-AS1 Gene

Gene Ontology (GO) - Biological Process for ADPGK-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADPGK-AS1 Gene

Drugs & Compounds for ADPGK-AS1 Gene

No Compound Related Data Available

Transcripts for ADPGK-AS1 Gene

mRNA/cDNA for ADPGK-AS1 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ADPGK-AS1 Gene

ADPGK antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ADPGK-AS1 Gene

No ASD Table

Relevant External Links for ADPGK-AS1 Gene

GeneLoc Exon Structure for
ADPGK-AS1
ECgene alternative splicing isoforms for
ADPGK-AS1

Expression for ADPGK-AS1 Gene

mRNA expression in normal human tissues for ADPGK-AS1 Gene

SOURCE GeneReport for Unigene cluster for ADPGK-AS1 Gene:

Hs.562587
genes like me logo Genes that share expression patterns with ADPGK-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ADPGK-AS1 Gene

Orthologs for ADPGK-AS1 Gene

Evolution for ADPGK-AS1 Gene

ENSEMBL:
Gene Tree for ADPGK-AS1 (if available)
TreeFam:
Gene Tree for ADPGK-AS1 (if available)

No data available for Orthologs for ADPGK-AS1 Gene

Paralogs for ADPGK-AS1 Gene

No data available for Paralogs for ADPGK-AS1 Gene

Variants for ADPGK-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADPGK-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs3862413 -- 72,794,511(+) CAGTA(C/T)AGCTT intron-variant
rs4776613 -- 72,788,390(+) ttgcc(C/T)aggat intron-variant
rs4776614 -- 72,790,127(+) tcttt(C/G)aatgg intron-variant
rs4776615 -- 72,793,040(+) gtctc(C/G)cactg intron-variant
rs4777540 -- 72,785,945(+) TGGGG(A/T)CAATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ADPGK-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2760039 CNV gain+loss 17122850
nsv1121512 CNV deletion 24896259
nsv428307 CNV gain 18775914

Relevant External Links for ADPGK-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADPGK-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ADPGK-AS1 Gene

Disorders for ADPGK-AS1 Gene

Relevant External Links for ADPGK-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ADPGK-AS1

No disorders were found for ADPGK-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADPGK-AS1 Gene

Publications for ADPGK-AS1 Gene

  1. Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. (PMID: 23263486) KAPttgen A. … Gieger C. (Nat. Genet. 2013) 3 65

Products for ADPGK-AS1 Gene

Sources for ADPGK-AS1 Gene

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