Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ADIRF-AS1 Gene

Subcategory (RNA class) for ADIRF-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ADIRF-AS1 Gene

  • ADIRF Antisense RNA 1 2 3 5

External Ids for ADIRF-AS1 Gene

Previous GeneCards Identifiers for ADIRF-AS1 Gene

  • GC10M088726

Summaries for ADIRF-AS1 Gene

GeneCards Summary for ADIRF-AS1 Gene

ADIRF-AS1 (ADIRF Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADIRF-AS1 Gene

Genomics for ADIRF-AS1 Gene

Regulatory Elements for ADIRF-AS1 Gene

Enhancers for ADIRF-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F087860 1.2 ENCODE 20.2 -893.4 -893426 9.0 PKNOX1 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 NUTM2A-AS1 RPL11P3 FAM35A ADIRF-AS1 FAM25A ADIRF PTEN LIPJ KLLN ENSG00000224745
GH10F087840 1.6 FANTOM5 Ensembl ENCODE 12.2 -872.6 -872591 6.8 FEZF1 BRCA1 ZNF2 YY1 GTF3C2 ZNF121 GLIS2 KLF7 FOS ZNF263 NUTM2A-AS1 FAM35A RPL11P3 RN7SL78P FAM25A ENSG00000196566 RPS26P38 ENSG00000223761 ADIRF-AS1 ENSG00000261011
GH10F087701 1.2 Ensembl ENCODE 12.2 -730.7 -730736 1.3 ZNF133 FEZF1 ZNF2 GLIS2 KLF7 FOS ZNF202 ZNF263 SP3 TSHZ1 NUTM2A-AS1 RPL11P3 ADIRF-AS1 FAM35A FAM25A ADIRF GC10P087721 ENSG00000196566
GH10F086519 1 ENCODE 12.7 +450.0 449995 3.6 ATF1 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF48 ETS1 YY1 ENSG00000261011 BMS1P3 ADIRF-AS1 BMPR1A FAM35A MMRN2 ADIRF LDB3 GLUD1 GC10M086520
GH10F087091 1.2 ENCODE 9.8 -122.6 -122585 6.2 PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 NUTM2A-AS1 FAM35A ENSG00000272631 BMPR1A RN7SL78P RPL11P3 ENSG00000223761 ENSG00000196566 RPS26P38 CFL1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ADIRF-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ADIRF-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000643499 511 2001 SIN3A ZBTB40 ZNF143 SMARCC2 RCOR1 FOS SP3 SMARCB1 RAD51 SMARCA4

Genomic Location for ADIRF-AS1 Gene

Chromosome:
10
Start:
86,965,345 bp from pter
End:
86,971,311 bp from pter
Size:
5,967 bases
Orientation:
Minus strand

Genomic View for ADIRF-AS1 Gene

Genes around ADIRF-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADIRF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADIRF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ADIRF-AS1 Gene

Proteins for ADIRF-AS1 Gene

Post-translational modifications for ADIRF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADIRF-AS1 Gene

Domains & Families for ADIRF-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADIRF-AS1 Gene

Function for ADIRF-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADIRF-AS1 Gene

Localization for ADIRF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ADIRF-AS1 Gene

Pathways & Interactions for ADIRF-AS1 Gene

SuperPathways for ADIRF-AS1 Gene

No Data Available

Interacting Proteins for ADIRF-AS1 Gene

Gene Ontology (GO) - Biological Process for ADIRF-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADIRF-AS1 Gene

Transcripts for ADIRF-AS1 Gene

mRNA/cDNA for ADIRF-AS1 Gene

(6) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ADIRF-AS1 Gene

ADIRF antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ADIRF-AS1 Gene

No ASD Table

Relevant External Links for ADIRF-AS1 Gene

GeneLoc Exon Structure for
ADIRF-AS1
ECgene alternative splicing isoforms for
ADIRF-AS1

Expression for ADIRF-AS1 Gene

SOURCE GeneReport for Unigene cluster for ADIRF-AS1 Gene:

Hs.714477
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ADIRF-AS1 Gene

Orthologs for ADIRF-AS1 Gene

Evolution for ADIRF-AS1 Gene

ENSEMBL:
Gene Tree for ADIRF-AS1 (if available)
TreeFam:
Gene Tree for ADIRF-AS1 (if available)

No data available for Orthologs for ADIRF-AS1 Gene

Paralogs for ADIRF-AS1 Gene

No data available for Paralogs for ADIRF-AS1 Gene

Variants for ADIRF-AS1 Gene

Relevant External Links for ADIRF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADIRF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADIRF-AS1 Gene

Disorders for ADIRF-AS1 Gene

Relevant External Links for ADIRF-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ADIRF-AS1

No disorders were found for ADIRF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADIRF-AS1 Gene

Publications for ADIRF-AS1 Gene

No publications were found for ADIRF-AS1 Gene.

Products for ADIRF-AS1 Gene

Sources for ADIRF-AS1 Gene

Content
Loading form....