ADH1C Gene
protein-coding GIFtS : 59
GCID: GC04 M100257
alcohol dehydrogenase 1C (class I), gamma polypeptide (Previous symbol: ADH3 )
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor ADH1C gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Alcohol Dehydrogenase 1C (Class I), Gamma Polypeptide 1 2 Alcohol Dehydrogenase 1C2 ADH31 2 3 5 Alcohol Dehydrogenase 3 (Class I), Gamma Polypeptide2 Alcohol Dehydrogenase Subunit Gamma2 3 Aldehyde Reductase2 EC 1.1.1.13 8 EC 1.1.18 ADH, Gamma Subunit2
Export aliases for ADH1C gene to outside databases Previous GC identifers: GC04M100504 GC04M100386 GC04M100452 GC04M100457 GC04M100614 GC04M095995
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor ADH1C gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for ADH1C : This gene encodes class I alcohol dehydrogenase, gamma subunit, which is a member of the alcohol dehydrogenase family. Members of this enzyme family metabolize a wide variety of substrates, including ethanol, retinol, other aliphatic alcohols, hydroxysteroids, and lipid peroxidation products. Class I alcohol dehydrogenase, consisting of several homo- and heterodimers of alpha, beta, and gamma subunits, exhibits high activity for ethanol oxidation and plays a major role in ethanol catabolism. Three genes encoding alpha, beta and gamma subunits are tandemly organized in a genomic segment as a gene cluster. (provided by RefSeq, Jul 2008) Gene Wiki entry for ADH1C PharmGKB "VIP " summary for
ADH1C
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor ADH1C gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000004.11 NC_018915.1 NT_016354.19 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the ADH1C gene promoter: POU2F2 (Oct-2.1) Oct-B1 oct-B3 oct-B2 CUTL1 POU2F2 FOXC1 POU2F1 POU2F1a Other transcription factors Search SABiosciences Chromatin IP Primers for ADH1C Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ADH1C
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 4q23 Ensembl cytogenetic band: 4q23 HGNC cytogenetic band: 4q23 ADH1C Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04M100257: view genomic region
(about GC identifiers )
Start:
100,257,649 bp from pter
End:
100,274,184 bp from pter
Size:
16,536 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor ADH1C gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: ADH1G_HUMAN, P00326 (See
protein sequence )Recommended Name: Alcohol dehydrogenase 1C Size : 375 amino acids; 39868 Da
Cofactor : Binds 2 zinc ions per subunit
Subunit : Dimer of identical or non-identical chains of three types; alpha, beta and gamma
Subcellular location : Cytoplasm
Miscellaneous : There are 7 different ADH's isozymes in human: three belongs to class-I: alpha, beta, and gamma, one toclass-II: pi, one to class-III: chi, one to class-IV: ADH7 and one to class-V: ADH6
Caution : The reference genome assembly, GRCh37, describes a non-functional copy of that gene with a stop codon atposition 78. However, this premature stop codon is not present in available mRNAs
3 PDB 3D structures from and Proteopedia for ADH1C :1DDA (3D)
  1HT0 (3D)
  1U3W (3D)
 
Secondary accessions : Q4PJ18 Q5WRV0 Q6LBW4 Q6NWV0 Q6NZA7Explore the universe of human proteins at neXtProt for ADH1C: NX_P00326 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P00326 4/32 DME Specific Peptides for ADH1C (P00326 ) (see all 32 )ADH1C Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_000660.1 ENSEMBL proteins: ENSP00000426083 Reactome Protein details: P00326 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005829 cytosol
TAS --
ADH1C for ontologies About GeneDecksing ADH1C Antibody Products: Assay Products for ADH1C:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor ADH1C gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
ADH1C for domains About GeneDecksing 5/6 InterPro domains/families (see all 6 ):
Graphical View of Domain Structure for InterPro Entry P00326 ProtoNet protein and cluster: P00326
2 Blocks protein families : IPB002328 Zinc-containing alcohol dehydrogenase IPB013154 Alcohol dehydrogenase GroES-like UniProtKB/Swiss-Prot: ADH1G_HUMAN, P00326 Similarity : Belongs to the zinc-containing alcohol dehydrogenase family
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor ADH1C gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: ADH1G_HUMAN, P00326 Catalytic activity : An alcohol + NAD(+) = an aldehyde or ketone + NADHEnzyme Numbers (IUBMB): EC 1.1.1.1 1 2 EC 1.1.1 2
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: ADH1C (NM_000669 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ADH1C Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ADH1C
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
ADH1C for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for ADH1C :Animal Models: Mouse knock-outs for ADH1C: Adh1 tm1Gdu Adh1 tm2Gdu 3 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Adh1) :
ADH1C for phenotypes About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor ADH1C gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/8 super-pathways (see all 8 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Ethanol oxidation 2 Drug metabolism - cytochrome P450 3 Metabolism 4 Tyrosine metabolism 5 Biological oxidations
Pathway sources See GeneCards unified pathways Show all pathways 1 BioSystems Pathway for ADH1C 4
Reactome Pathways for ADH1C 1 PharmGKB Pathway for ADH1C 5/7
Kegg Pathways (Kegg details for ADH1C) (see all 7 ):
ADH1C for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ADH1C 1 Interacting protein for ADH1C (P00326 3 ) via UniProtKB, MINT, STRING, and/or I2D About this table Gene Ontology (GO): 3 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006069 ethanol oxidation
TAS -- GO:0006805 xenobiotic metabolic process
TAS -- GO:0044281 small molecule metabolic process
TAS --
ADH1C for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor ADH1C gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
ADH1C for compounds About GeneDecksing Browse Tocris compounds for ADH1C 10/17 HMDB Compounds for ADH1C (see all 17 ) About this table Compound Synonyms
CAS
# PubMed Ids 3,4-Dihydroxymandelaldehyde 3,4-Dihydroxyphenylglycolaldehyde (see all 4 ) 13023-73-9 -- 3,4-Dihydroxyphenylglycol (3,4-Dihydroxyphenyl)ethylene glycol (see all 9 ) 28822-73-3 -- 3a,7a-Dihydroxy-5b-cholestan-26-al 3a,7a-Dihydroxy-5b-cholestan-26-al;3alpha,7alpha-dihydroxy-5beta-cholestan-27-al;5beta-cholestane-3alpha,7alpha-diol-27-al;5beta-cholestan-27-al-3alpha,7alpha-diol -- -- 9-cis-Retinal 9-cis-Retinal (see all 5 ) 514-85-2 -- Acetaldehyde acetaldehyde (see all 5 ) 75-07-0 -- Betaine aldehyde (Formylmethyl)trimethylammonium (see all 8 ) 7418-61-3 -- Choline (2-Hydroxyethyl)trimethyl ammonium (see all 19 ) 62-49-7 -- Ethanol 1-Hydroxyethane (see all 57 ) 64-17-5 -- Glycerol 1,2,3-Trihydroxypropane (see all 22 ) 56-81-5 -- NAD 3-Carbamoyl-1-D-ribofuranosylpyridinium hydroxide 5'-ester with adenosine 5'-pyrophosphate (see all 28 ) 53-84-9 --
10/20 DrugBank Compounds for ADH1C (see all 20 ) About this table 7 Novoseek chemical compound relationships for ADH1C gene About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
acetaldehyde
80.9
11
11700261 (2), 19120062 (1), 16930209 (1), 7943668 (1) (see all 8 )
rsai
72.3
3
10925369 (1), 15318112 (1), 9731720 (1)
ethanol
62.5
18
15602753 (2), 20101753 (2), 11700261 (2), 19120062 (1) (see all 12 )
formaldehyde
49.7
28
19460944 (3), 19963048 (2), 19011746 (2), 11387027 (1) (see all 8 )
p002
21
1
11207350 (1)
vitamin a
9.75
1
15602753 (1)
oligonucleotide
0
1
9063814 (1)
Search CenterWatch for drugs/clinical trials and news about ADH1C / ADH1G
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor ADH1C gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for ADH1C gene: NM_000669.3 Unigene Cluster for ADH1C:
Alcohol dehydrogenase 1C (class I), gamma polypeptide Hs.654537 [show with all ESTs ] Unigene Representative Sequence: NM_000669 4 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000515683 (uc021xqi.1 ) ENST00000510055 ENST00000511397 ENST00000505942 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C (see all 3 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: ADH1C (NM_000669 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ADH1C Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ADH1C
Additional cDNA sequence: BC062476.1 BC066227.1 BC066228.1 BC067419.1 BC067420.1 BC067421.1 BC067422.1 BC074771.2 BC074786.2 M12272.1 X04299.1 X04350.1
13 DOTS entries : DT.100030344 DT.95158774
DT.101985268 DT.415876 DT.100798841 DT.101985267 DT.121224284 DT.100798849 DT.91692319 DT.121224280 DT.100798839 DT.121224262 DT.95158779 24/475 AceView cDNA sequences (see all 475 ):
AI275907 BM980353 BI758997 CB135740 AV681652 CB267103 BX099744 D00137 CB138477 BX472538 AA903791 CB148337 BQ786902 BU687891 CB138242 BP381861 CD014078 NM_000667 D58197 AU076586 M12271 BM975207 AU121675 AU122226 GeneLoc Exon Structure
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for ADH1C gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section ADH1C expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: ATCTGGAGCA
About this image ADH1C expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table See ADH1C Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for ADH1C SOURCE GeneReport for Unigene cluster: Hs.654537 SABiosciences Expression via Pathway-Focused PCR Arrays including ADH1C : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ADH1CBrowse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat ADH1C QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ADH1C QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ADH1C
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor ADH1C gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for ADH1C gene from 3/8 species (see all 8 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
mouse (Mus musculus)
Mammalia
Adh11 , 5
alcohol dehydrogenase 1 (class I)1, 5
82.22(n) 1 85.07(a) 1
 
3 (64.16 cM) 5 11522 1 NM_007409.2 1 NP_031435.1 1 138260991 5
chicken (Gallus gallus)
Aves
ADH1C1
alcohol dehydrogenase 1C (class I), gamma polypeptide
70.6(n) 74.53(a)
 
771920 XM_001234262.2 XP_001234263.2
rice (Oryza sativa)
Liliopsida
Os.125912
O. sativa mRNA for alcohol dehydrogenase 1
74.27(n)
 
AK073964.1
ENSEMBL Gene Tree for ADH1C (if available)TreeFam Gene Tree for ADH1C (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor ADH1C gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor ADH1C gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section UniProtKB/Swiss-Prot: ADH1G_HUMAN, P00326 Polymorphism : Two main alleles are known, ADH3*1 or gamma-1 has Arg-272/Ile-350 while ADH3*2 or gamma-2 hasGln-272/Val-350. ADH3*1 is associated with a fast rate of ethanol oxidation and ADH3*2 with a slow rate
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 4 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for ADH1C (100257649 - 100274184 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV): 1 variation for ADH1C 1 Indel : 12502 Human Gene Mutation Database (HGMD) : ADH1C SABiosciences Cancer Mutation PCR Assays
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor ADH1C gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
ADH1C for disorders About GeneDecksing OMIM gene information: 103730 OMIM disorders : 103780 168600 20/44 diseases for ADH1C (see all 44 ): About MalaCards alcoholism alcohol dependence, protection against alcohol dependence alcohol abuse squamous cell carcinoma coronary heart disease liver cirrhosis alcoholic liver cirrhosis drug dependence myocardial infarction oral squamous cell carcinoma squamous cell carcinoma of the head and neck esophageal squamous cell carcinoma parkinson's disease hearing loss liver disease intrahepatic cholangiocarcinoma laryngeal cancer laryngitis acute pancreatitis 10/28 Novoseek disease relationships for ADH1C gene (see all 28 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
alcoholism
77.2
31
15519646 (3), 8773821 (3), 12710951 (2), 15902904 (2) (see all 20 )
pharyngeal cancer
69.1
3
9637146 (1), 10925369 (1), 9390539 (1)
pancreatitis alcoholic
63
3
8985275 (1), 15220553 (1), 8986224 (1)
alcoholic cirrhosis
58.5
5
1592339 (2), 15220553 (1), 11748356 (1), 11966948 (1)
liver diseases alcoholic
57.5
5
15519646 (3), 9731720 (2)
chronic pancreatitis
48.5
5
16239350 (1), 17454860 (1), 18773092 (1), 11966948 (1) (see all 5 )
pancreatitis
43.1
1
8985275 (1)
oral cancer
41.7
2
11802217 (1)
oropharyngeal cancer
41
1
9050916 (1)
cirrhosis
40.7
7
8985275 (1), 17454860 (1), 1592339 (1), 15519646 (1) (see all 5 )
Genetic Association Database (GAD): ADH1C Human Genome Epidemiology (HuGE) Navigator: ADH1C (148 documents) Export disorders for ADH1C gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor ADH1C gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for ADH1C gene, integrated from 9 sources (see all 279 ): (articles sorted by number of sources associating them with ADH1C) Utopia : connect your pdf to the dynamic world of online information
A prospective study of the effect of alcohol consumption and ADH3 genotype on plasma steroid hormone levels and breast cancer risk. (PubMed id 11045794) 1 , 4, 9 Hines L.M....Hunter D.J. (2000) Alcohol dehydrogenase type 3 (ADH3) and the risk of bladder cancer. (PubMed id 11752857) 1 , 4, 9 van Dijk B....Kiemeney L.A. (2001) Alcohol consumption and high-density lipoprotein levels: the effect of ADH1C genotype, gender and menopausal status. (PubMed id 16051248) 1 , 4, 9 Hines L.M....Rimm E.B. (2005) Alcohol dehydrogenase 3 genotype as a risk factor for upper aerodigestive tract cancers. (PubMed id 14732773) 1 , 4, 9 Nishimoto I.N....Kowalski L.P. (2004) Genetic polymorphisms of ADH2, ADH3, CYP4502E1 Dra-I and Pst-I, and ALDH2 in Spanish men: lack of association with alcoholism and alcoholic liver disease. (PubMed id 15519646) 1 , 4, 9 Vidal F....Richart C. (2004) Alcohol dehydrogenase 3 and risk of squamous cell carcinomas of the head and neck. (PubMed id 15767341) 1 , 4, 9 Wang D....Haugen T.H. (2005) Alcohol dehydrogenase 3, glutathione S-transferase M1 and T1 polymorphisms, alcohol consumption and hepatocellular carcinoma (Italy). (PubMed id 16132793) 1 , 4, 9 Covolo L....Donato F. (2005) Role of epoxide hydrolase, NAD(P)H:quinone oxidoreductase, cytochrome P450 2E1 or alcohol dehydrogenase genotypes in susceptibility to colorectal cancer. (PubMed id 16039674) 1 , 4, 9 van der Logt E.M....Peters W.H. (2006) Alcohol and aldehyde dehydrogenase polymorphisms in men with type I and Type II alcoholism. (PubMed id 15863807) 1 , 4, 9 Chai Y.G....Choi I.G. (2005) Association of habitual smoking and drinking with single nucleotide polymorphism (SNP) in 40 candidate genes: data from random population-based Japanese samples. (PubMed id 15654505) 1 , 4, 9 Liu Y....Tsugane S. (2005)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for ADH1C gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing ADH1C gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing ADH1C gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing ADH1C gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for ADH1C Pharmacogenomics, SNPs, Pathways NIEHS-SNPs http://egp.gs.washington.edu/data/adh1c/
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for ADH1C gene: Search GeneIP for patents involving ADH1C GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor ADH1C gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for ADH1C OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for ADH1C OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ADH1C OriGene Protein Over-expression Lysate for ADH1C Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for ADH1C OriGene 3'-UTR Clone for ADH1C OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ADH1C Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for ADH1C OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for ADH1C OriGene Custom Protein Services for ADH1C OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ADH1C Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ADH1C QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ADH1C QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat ADH1C QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ADH1C QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ADH1C
Search Tocris compounds for ADH1C
Recombinant Protein for ADH1C
ADH1C Proteins, Antibodies, CLIAs, and ELISAs
ThermoFisher Antibody for ADH1C
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ADH1C
Jump to Section...
Aliases for ADH1C
Databases for ADH1C
Disorders / Diseases for ADH1C
Domains / Families for ADH1C
Drugs / Compounds for ADH1C
Expression for ADH1C
Function for ADH1C
Genomic Views for ADH1C
Intellectual Property for ADH1C
Orthologs for ADH1C
Paralogs for ADH1C
Pathways / Interactions for ADH1C
Products for ADH1C
Proteins for ADH1C
Publications for ADH1C
Search Box for ADH1C
Summaries for ADH1C
Transcripts for ADH1C
Variants for ADH1C
TOP
BOTTOM