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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ADH1A Gene

protein-coding   GIFtS: 62
GCID: GC04M100197

alcohol dehydrogenase 1A (class I), alpha polypeptide


(Previous symbol: ADH1)
 Explore 23 diseases affiliated with
ADH1A via our new
 Human Malady Compendium 
Biological research products
for ADH1A
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Alcohol Dehydrogenase 1A (Class I), Alpha Polypeptide1 2     Alcohol Dehydrogenase 1 (Class I), Alpha Polypeptide2
ADH11 2 3 5     Alcohol Dehydrogenase 1A2
Alcohol Dehydrogenase Subunit Alpha2 3     Aldehyde Reductase2
EC 1.1.1.13 8     EC 1.1.18
ADH, Alpha Subunit2     

External Ids:    HGNC: 2491   Entrez Gene: 1242   Ensembl: ENSG000001877587   OMIM: 1037005   UniProtKB: P073273   

Export aliases for ADH1A gene to outside databases

Previous GC identifers: GC04M100444 GC04M100450 GC04M100655 GC04M100554 GC04M095935


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ADH1A:
This gene encodes a member of the alcohol dehydrogenase family. The encoded protein is the alpha subunit of class I
alcohol dehydrogenase, which consists of several homo- and heterodimers of alpha, beta and gamma subunits. Alcohol
dehydrogenases catalyze the oxidation of alcohols to aldehydes. This gene is active in the liver in early fetal life
but only weakly active in adult liver. This gene is found in a cluster with six additional alcohol dehydrogenase
genes, including those encoding the beta and gamma subunits, on the long arm of chromosome 4. Mutations in this gene
may contribute to variation in certain personality traits and substance dependence. (provided by RefSeq, Nov 2010)

Gene Wiki entry for ADH1A

PharmGKB "VIP" summary for ADH1A


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016354.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ADH1A gene promoter:
         GR   ATF-2   CUTL1   HEN1   IRF-2   CP2   POU2F1   GR-alpha   
         Other transcription factors

Browse SwitchGear Promoter luciferase reporter plasmids
   Search SABiosciences Chromatin IP Primers for ADH1A

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ADH1A


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q23   Ensembl cytogenetic band:  4q23   HGNC cytogenetic band: 4q23

ADH1A Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ADH1A gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M100197:  view genomic region     (about GC identifiers)

Start:
100,197,524 bp from pter      End:
100,212,185 bp from pter
Size:
14,662 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ADH1A_HUMAN, P07327 (See protein sequence)
Recommended Name: Alcohol dehydrogenase 1A  
Size: 375 amino acids; 39859 Da
Cofactor: Binds 2 zinc ions per subunit
Subunit: Dimer of identical or non-identical chains of three types; alpha, beta and gamma
Subcellular location: Cytoplasm
Miscellaneous: There are 7 different ADH's isozymes in human: three belongs to class-I: alpha, beta, and gamma, one to
class-II: pi, one to class-III: chi, one to class-IV: ADH7 and one to class-V: ADH6
2 PDB 3D structures from and Proteopedia for ADH1A:
1HSO (3D)        1U3T (3D)    
Secondary accessions: A8K3E3 Q17R68

Explore the universe of human proteins at neXtProt for ADH1A: NX_P07327

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P07327

  • 4/31 DME Specific Peptides for ADH1A (P07327) (see all 31)
     CINPQDY  FSQYTVV  EVAPPKA  CLIGCGF 

    ADH1A Protein expression data from MOPED and PaxDb:    About this image 
    ADH1A Protein Expression
    REFSEQ proteins: NP_000658.1  
    ENSEMBL proteins: 
     ENSP00000209668  
    Reactome Protein details: P07327
    Human Recombinant Protein Products for ADH1A: 
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    Uscn Proteins for ADH1A

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829cytosol TAS--

    ADH1A for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    ADH1A for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR013149 ADH_C
     IPR011032 GroES-like
     IPR016040 NAD(P)-bd_dom
     IPR002328 ADH_Zn_CS
     IPR013154 ADH_GroES-like

    Graphical View of Domain Structure for InterPro Entry P07327

    ProtoNet protein and cluster: P07327

    2 Blocks protein families:
    IPB002328 Zinc-containing alcohol dehydrogenase
    IPB013154 Alcohol dehydrogenase GroES-like


    UniProtKB/Swiss-Prot: ADH1A_HUMAN, P07327
    Similarity: Belongs to the zinc-containing alcohol dehydrogenase family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ADH1A_HUMAN, P07327
    Catalytic activity: An alcohol + NAD(+) = an aldehyde or ketone + NADH

         Enzyme Numbers (IUBMB): EC 1.1.1.11 2 EC 1.1.12

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166nucleotide binding IEA--
    GO:0004022alcohol dehydrogenase (NAD) activity TAS--
    GO:0004024alcohol dehydrogenase activity, zinc-dependent IDA9982
    GO:0005515protein binding IPI16153155
    GO:0008270zinc ion binding IEA--
         
    ADH1A for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for ADH1A:
     Synthetic lethal with Ras 

    Animal Models:
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    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/11 super-pathways (see all 11About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Ethanol oxidation
    Ethanol oxidation1.00
    Cyclophosphamide Pathway, Pharmacodynamics0.42
    Fatty Acid Omega Oxidation0.47
    2Drug metabolism - cytochrome P450
    Drug metabolism - cytochrome P4501.00
    Retinol metabolism0.40
    Metabolism of xenobiotics by cytochrome P4500.73
    3Abacavir transport and metabolism
    Abacavir transport and metabolism1.00
    Abacavir metabolism0.50
    4Metabolism
    Metabolism1.00
    Metabolic pathways0.38
    5Vitamin A and carotenoid metabolism
    Vitamin A and carotenoid metabolism1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2 BioSystems Pathways for ADH1A 
        Vitamin A and carotenoid metabolism
    Fatty Acid Omega Oxidation

    5/6        Reactome Pathways for ADH1A (see all 6)
        Ethanol oxidation
    Abacavir metabolism
    Metabolism
    Biological oxidations
    Phase 1 - Functionalization of compounds

    2 PharmGKB Pathways for ADH1A
        Celecoxib Pathway, Pharmacokinetics
    Cyclophosphamide Pathway, Pharmacodynamics

    5/7         Kegg Pathways  (Kegg details for ADH1A) (see all 7):
        Glycolysis / Gluconeogenesis
    Fatty acid metabolism
    Tyrosine metabolism
    Retinol metabolism
    Metabolism of xenobiotics by cytochrome P450


    ADH1A for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for ADH1A

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/64 Interacting proteins for ADH1A (ENSP000002096684) via UniProtKB, MINT, STRING, and/or I2D (see all 64)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ALDH1A1ENSP000002977854STRING: ENSP00000297785
    ALDH1A2ENSP000002497504STRING: ENSP00000249750
    ALDH1A3ENSP000003322564STRING: ENSP00000332256
    ALDH1B1ENSP000003669274STRING: ENSP00000366927
    ALDH2ENSP000002617334STRING: ENSP00000261733
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006066alcohol metabolic process NAS2347582
    GO:0006069ethanol oxidation TAS--
    GO:0006351transcription, DNA-dependent ----
    GO:0006805xenobiotic metabolic process TAS--
    GO:0017144drug metabolic process TAS--

    ADH1A for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    ADH1A for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for ADH1A

    10/24 HMDB Compounds for ADH1A (see all 24)    About this table
    CompoundSynonyms CAS #PubMed Ids
    1-Butanol1-Butanol (see all 10)71-36-3--
    1-Hexanol1-Hexyl alcohol (see all 30)111-27-3--
    1-Pentanol1-Pentol (see all 34)71-41-0--
    3,4-Dihydroxymandelaldehyde3,4-Dihydroxyphenylglycolaldehyde (see all 4)13023-73-9--
    3,4-Dihydroxyphenylglycol(3,4-Dihydroxyphenyl)ethylene glycol (see all 9)28822-73-3--
    3a,7a-Dihydroxy-5b-cholestan-26-al3a,7a-Dihydroxy-5b-cholestan-26-al;3alpha,7alpha-dihydroxy-5beta-cholestan-27-al;5beta-cholestane-3alpha,7alpha-diol-27-al;5beta-cholestan-27-al-3alpha,7alpha-diol ----
    3a,7a-Dihydroxy-5b-cholestane5beta-Cholestane-3alpha,7alpha-diol (see all 5)3862-26-8--
    9-cis-Retinal9-cis-Retinal (see all 5)514-85-2--
    Acetaldehydeacetaldehyde (see all 5)75-07-0--
    Betaine aldehyde(Formylmethyl)trimethylammonium (see all 8)7418-61-3--

    6 DrugBank Compounds for ADH1A    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Fomepizole4-methylpyrazole (see all 4)7554-65-6targetinhibitor16946442 16871118 2789998 16790752 19458366 8997246
    EthanolAbsolute Alcohol (see all 34)64-17-5targetagonist18688716 21329681 21166830 19618839
    N-Cyclopentyl-N-Cyclobutylformamide-- --target--17139284 17016423 10592235
    NADHbeta-DPNH (see all 18)606-68-8target--16760478 16897483
    enzymesubstrate16760478 16897483 19583966
    4-Iodopyrazole-- 3469-69-0target--17139284 17016423
    Nicotinamide-Adenine-Dinucleotide-- 53-84-9target--17139284 17016423

    5 Novoseek chemical compound relationships for ADH1A gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    vitamin a 55.1 6 18343808 (1), 15096205 (1), 19011747 (1), 17553814 (1)
    retinoid 51.4 1 17553814 (1)
    acetaldehyde 50 3 16790752 (1), 18304535 (1)
    ethanol 45.1 7 19489444 (2), 16153155 (1), 16790752 (1), 16453102 (1) (see all 6)
    retinoic acid 43.3 5 1996113 (2), 18343808 (1), 7748347 (1), 19011747 (1)

    Search CenterWatch for drugs/clinical trials and news about ADH1A 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ADH1A gene: 
    NM_000667.3  

    Unigene Cluster for ADH1A:

    Alcohol dehydrogenase 1A (class I), alpha polypeptide
    Hs.654433  [show with all ESTs]
    Unigene Representative Sequence: NM_000667
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000209668(uc003hur.2) ENST00000503461(uc010ilf.1 uc010ilg.2)
    ENST00000511656

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    Additional cDNA sequence: 

    AK290558.1 AK309597.1 BC074738.2 BC117442.1 BC126306.1 BT019812.1 M12271.1 M12963.1 

    16 DOTS entries:

    DT.121224262  DT.92469055  DT.95158774  DT.100030344  DT.415876  DT.91692319  DT.99980497  DT.100798850 
    DT.121224274  DT.92469032  DT.100001280  DT.100798839  DT.100798841  DT.100798842  DT.101985267  DT.91679459 

    24/475 AceView cDNA sequences (see all 475):

    CB241024 CB137629 CB148959 BI517854 AU122403 AA416884 AI796953 BX119792 
    AI581294 CB147187 CD014149 BG564896 NM_000668 CB138273 CD172162 CB132385 
    BP381206 CB162202 BI832910 AI275907 BC074738 CB141250 CB138229 CB147446 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for ADH1A    About this scheme

    ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b · 9c
    SP1:                                      -           -     -     -     -     -               
    SP2:                                            -                                             
    SP3:                                      -                                                   
    SP4:                                                                                          


    ECgene alternative splicing isoforms for ADH1A

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ADH1A expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --
    ADH1A Expression
    About this image

    ADH1A expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 2 LifeMap Cells 
    NameCategory
    PureStem™ mesenchymal progenitor MEL2 (Embryonic Progenitor Cell)Adipose, Bone, Cartilage
    Pancreatic endoderm/endocrine precursor-like cells (A scalable, suspensi...)
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See ADH1A Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ADH1A

    SOURCE GeneReport for Unigene cluster: Hs.654433
        SABiosciences Expression via Pathway-Focused PCR Array including ADH1A: 
              Drug Metabolism: Phase I Enzymes in human mouse rat

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    In Situ
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for ADH1A gene from 8/25 species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves F1NI80_CHICK6
    Uncharacterized protein
    72(a)
    1 → many
    4(61579079-61589162)
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    (see all 3)
    --
    70(a)
    67(a)
    (see all 3)
    many ↔ many
    many ↔ many
    (see all 3)
    GL343323.1(1237922-1251279)
    GL343323.1(1380739-1391213)
    zebrafish
    (Danio rerio)
    Actinopterygii zgc:779386
    zgc:635686
    (see all 4)
    zgc:63568
    (see all 4)
    58(a)
    57(a)
    (see all 4)
    many ↔ many
    many ↔ many
    (see all 4)
    14(37121611-37132341)
    14(37113161-37120779)
    fruit fly
    (Drosophila melanogaster)
    Insecta Fdh6
    Formaldehyde dehydrogenase
    51(a)
    1 → many
    3R(6696628-6698102)
    worm
    (Caenorhabditis elegans)
    Secernentea H24K24.36
    Y50D4C.26
    Protein Y50D4C.2
    49(a)
    31(a)
    many ↔ many
    many ↔ many
    V(911775-916461)
    V(936399-939368)
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons ATGSNOR16
    ADH16
    (see all 9)
    alcohol dehydrogenase class-P
    (see all 9)
    50(a)
    49(a)
    (see all 9)
    many ↔ many
    many ↔ many
    (see all 9)
    5(17684156-17686534)
    1(28975394-28977417)
    rice
    (Oryza sativa)
    Liliopsida --
    --
    (see all 9)
    dehydrogenase, putative, expressed
    (see all 9)
    50(a)
    48(a)
    (see all 9)
    many ↔ many
    many ↔ many
    (see all 9)
    2(34924401-34928315)
    11(5740713-5743904)
    E. coli
    (Escherichia coli)
    Gamma proteobacteria frmA6
    yphC6
    alcohol dehydrogenase class III/glutathione-depend...
    predicted oxidoreductase, Zn-dependent and NAD(P)-...
    47(a)
    25(a)
    1 ↔ many
    possible ortholog
    Chromosome(377686-378795)
    Chromosome(2672722-2673783)


    ENSEMBL Gene Tree for ADH1A (if available)
    TreeFam Gene Tree for ADH1A (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ADH1A gene
    ADH62  ADH42  ADH1B2  ADH52  ADH72  
    6 SIMAP similar genes for ADH1A using alignment to 1 protein entry:     ADH1A_HUMAN:
    ADH1C    ADH1B    ADH7    ADH5    ADH4    ADH6

    ADH1A for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/292 NCBI SNPs in ADH1A are shown (see all 292    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1114271221,2
    --100197063(+) TTTGCG/AATTAG 2 -- ds5001 int11Minor allele frequency- A:0.50CSA 2
    rs1508598761,2
    --100197126(+) CAATTA/GTATAT 2 -- int1 ds50010--------
    rs283643421,2
    C,F,H--100197176(-) ACAGTG/TAAGGA 2 -- ds5001 int112Minor allele frequency- T:0.06NS NA WA 1086
    rs58605731,2
    C,F--100197320(+) TTATTA/-AAAAA 2 -- ds5001 int13Minor allele frequency- -:0.50NA 6
    rs2017917431,2
    C--100197332(+) AAAAAA/GGGCGA 2 -- int1 ds50010--------
    rs175841491,2
    C,F--100197335(+) AAAGGC/TGAAAA 2 -- ds5001 int13Minor allele frequency- T:0.04NA 142
    rs1154826441,2
    F--100197336(+) AAGGCG/AAAAAT 2 -- int1 ds50011Minor allele frequency- A:0.03NA 120
    rs1888052631,2
    --100197344(+) AATGCC/TGACAG 2 -- int1 ds50010--------
    rs76846741,2
    C,F,H--100197359(+) AATTGA/CGATAG 2 -- ds5001 int127Minor allele frequency- C:0.12NA NS EA WA CSA 2052
    rs1920352011,2
    --100197492(+) AAATAC/GCTTTT 2 -- ds5001 int10--------

    HapMap Linkage Disequilibrium report for ADH1A (100197524 - 100212185 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for ADH1A: --

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ADH1A
    DNA2.0 Custom Variant and Variant Library Synthesis for ADH1A

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ADH1A for disorders           About GeneDecksing

    OMIM gene information: 103700    OMIM disorders: --

    20/23 diseases for ADH1A (see all 23):    About MalaCards
    alcoholism    substance dependence    uterine fibroid    fetal alcohol syndrome
    alcoholic liver cirrhosis    drug dependence    liver cirrhosis    alcohol dependence
    intrahepatic cholangiocarcinoma    squamous cell carcinoma    anoxia    adhd
    cholangiocarcinoma    parkinson's disease    endometrial cancer    pancreatic cancer
    colorectal cancer    breast cancer    pancreatitis    pneumonia

    1 disease from the University of Copenhagen DISEASES database for ADH1A:
    Alcohol dependence
    Genetic Association Database (GAD): ADH1A
    Human Genome Epidemiology (HuGE) Navigator: ADH1A (24 documents)

    Export disorders for ADH1A gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ADH1A gene, integrated from 9 sources (see all 108):
    (articles sorted by number of sources associating them with ADH1A)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The human class I alcohol dehydrogenase gene cluster: three genes are tandemly organized in an 80-kb-long segment of the genome. (PubMed id 2347582)1, 2, 9 Yasunami M.... Yoshida A. (1990)
    2. Effects of polymorphisms in untranslated regions of t he class I alcohol dehydrogenase (ADH) genes on alcohol metabolism in Japanese subjects and transcriptional activity in HepG2 cells. (PubMed id 19618839)1, 7 Nishimura F.T....Saijoh K. (2009)
    3. Genotype announcement in a genetic polymorphism study for health checkup examinees at Nagoya University Hospital. (PubMed id 15279067)1, 4 Nishio K....Hamajima N. (2004)
    4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    5. Alcohol dehydrogenase polymorphism and Parkinson's disease. (PubMed id 11356310)1, 4 Tan E.K....Ashizawa T. (2001)
    6. Alcohol dehydrogenase 3 genotype is not associated with risk of squamous cell carcinoma of the oral cavity and pharynx. (PubMed id 11303599)1, 4 Sturgis E.M....Wei Q. (2001)
    7. Molecular structure of the human alcohol dehydrogenase 1 gene. (PubMed id 2920825)1, 2 Matsuo Y. and Yokoyama S. (1989)
    8. cDNA and protein structure for the alpha subunit of human liver alcohol dehydrogenase. (PubMed id 3013304)1, 2 von Bahr-Lindstroem H.... Joernvall H. (1986)
    9. Three human alcohol dehydrogenase subunits: cDNA structure and molecular and evolutionary divergence. (PubMed id 2935875)1, 2 Ikuta T.... Yoshida A. (1986)
    10. Genetics of human alcohol and aldehyde dehydrogenases. (PubMed id 3006456)1, 3 Smith M. (1986)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 124 HGNC: 249 AceView: ADH1AandADH1BandADH1C Ensembl:ENSG00000187758 euGenes: HUgn124
    ECgene: ADH1A Kegg: 124 H-InvDB: ADH1A

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ADH1A Pharmacogenomics, SNPs, Pathways
    NIEHS-SNPshttp://egp.gs.washington.edu/data/adh1a/

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ADH1A gene:
    Search GeneIP for patents involving ADH1A

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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