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Aliases for ADGRD1-AS1 Gene

Subcategory (RNA class) for ADGRD1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ADGRD1-AS1 Gene

  • ADGRD1 Antisense RNA 1 2 3
  • Lung Adenocarcinoma-Associated Transcript 8 2 3
  • RP11-76C10.5 5
  • LACAT8 3

External Ids for ADGRD1-AS1 Gene

Summaries for ADGRD1-AS1 Gene

GeneCards Summary for ADGRD1-AS1 Gene

ADGRD1-AS1 (ADGRD1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADGRD1-AS1 Gene

Genomics for ADGRD1-AS1 Gene

Regulatory Elements for ADGRD1-AS1 Gene

Enhancers for ADGRD1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G130978 1.2 Ensembl ENCODE 6.8 +11.8 11839 6.4 HDGF PKNOX1 FOXA2 ATF1 ARID4B FEZF1 PPARG TBX21 MEF2D RCOR2 ADGRD1 ADGRD1-AS1 ENSG00000256204 ENSG00000279581 ENSG00000280002
GH12G130986 0.8 ENCODE 7.9 +5.9 5853 3.6 BCOR CTCF SOX13 DRAP1 TFAP4 SAP130 ZMYM3 RAD21 ZIC2 POLR2A ADGRD1 ADGRD1-AS1 ENSG00000280002 ENSG00000279581
GH12G131027 0.9 FANTOM5 ENCODE 6.5 -34.8 -34764 1.6 ZNF687 FOXA2 FOS HNF4A CUX1 ZIC2 FOXA1 ADGRD1 ADGRD1-AS1 ENSG00000279993 ENSG00000256810
GH12G131001 0.8 ENCODE 6.2 -8.4 -8436 1.2 HDGF TBL1XR1 MAX ZIC2 ARID3A CBX5 POLR2A EED RELB IKZF2 ADGRD1-AS1 ADGRD1 ENSG00000279128
GH12G131006 0.7 ENCODE 5 -13.7 -13687 2.7 FOXA2 RAD21 YY1 ZNF316 POLR2A HNF4G MAFK MAFG USF2 REST ADGRD1 ADGRD1-AS1 ENSG00000279128
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ADGRD1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ADGRD1-AS1 Gene

Chromosome:
12
Start:
130,990,138 bp from pter
End:
130,993,976 bp from pter
Size:
3,839 bases
Orientation:
Minus strand

Genomic View for ADGRD1-AS1 Gene

Genes around ADGRD1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADGRD1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADGRD1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADGRD1-AS1 Gene

Proteins for ADGRD1-AS1 Gene

Post-translational modifications for ADGRD1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADGRD1-AS1 Gene

Domains & Families for ADGRD1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADGRD1-AS1 Gene

Function for ADGRD1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADGRD1-AS1 Gene

Localization for ADGRD1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ADGRD1-AS1 Gene

Pathways & Interactions for ADGRD1-AS1 Gene

SuperPathways for ADGRD1-AS1 Gene

No Data Available

Interacting Proteins for ADGRD1-AS1 Gene

Gene Ontology (GO) - Biological Process for ADGRD1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADGRD1-AS1 Gene

Drugs & Compounds for ADGRD1-AS1 Gene

No Compound Related Data Available

Transcripts for ADGRD1-AS1 Gene

mRNA/cDNA for ADGRD1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADGRD1-AS1 Gene

No ASD Table

Relevant External Links for ADGRD1-AS1 Gene

GeneLoc Exon Structure for
ADGRD1-AS1
ECgene alternative splicing isoforms for
ADGRD1-AS1

Expression for ADGRD1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADGRD1-AS1 Gene

Orthologs for ADGRD1-AS1 Gene

Evolution for ADGRD1-AS1 Gene

ENSEMBL:
Gene Tree for ADGRD1-AS1 (if available)
TreeFam:
Gene Tree for ADGRD1-AS1 (if available)

No data available for Orthologs for ADGRD1-AS1 Gene

Paralogs for ADGRD1-AS1 Gene

No data available for Paralogs for ADGRD1-AS1 Gene

Variants for ADGRD1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADGRD1-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000039402 -- 130,990,328(+) AAGAG(A/C)TTTTC intron-variant, downstream-variant-500B
rs1000178746 -- 130,995,833(+) ATAGG(A/G)CAATA intron-variant, upstream-variant-2KB
rs1000280665 -- 130,995,491(+) AACTC(A/T)TGTGG intron-variant, upstream-variant-2KB
rs1001085673 -- 130,991,418(+) AAAAG(C/T)TCAAT intron-variant
rs1001116340 -- 130,993,041(+) TGAAG(A/T)CCCAC intron-variant, upstream-variant-2KB

Relevant External Links for ADGRD1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADGRD1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADGRD1-AS1 Gene

Disorders for ADGRD1-AS1 Gene

Relevant External Links for ADGRD1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ADGRD1-AS1

No disorders were found for ADGRD1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADGRD1-AS1 Gene

Publications for ADGRD1-AS1 Gene

  1. The landscape of long noncoding RNAs in the human transcriptome. (PMID: 25599403) Iyer M.K. … Chinnaiyan A.M. (Nat. Genet. 2015) 2 3 64
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64

Products for ADGRD1-AS1 Gene

Sources for ADGRD1-AS1 Gene

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