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Aliases for ADGRA1-AS1 Gene

Subcategory (RNA class) for ADGRA1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ADGRA1-AS1 Gene

  • Adhesion G Protein-Coupled Receptor A1 Antisense RNA 1 2 3 5
  • GPR123 Antisense RNA 1 2 3
  • GPR123-AS1 3

External Ids for ADGRA1-AS1 Gene

Previous HGNC Symbols for ADGRA1-AS1 Gene

  • GPR123-AS1

Summaries for ADGRA1-AS1 Gene

GeneCards Summary for ADGRA1-AS1 Gene

ADGRA1-AS1 (Adhesion G Protein-Coupled Receptor A1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ADGRA1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADGRA1-AS1 Gene

Genomics for ADGRA1-AS1 Gene

Regulatory Elements for ADGRA1-AS1 Gene

Enhancers for ADGRA1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H133087 0.6 ENCODE 0.7 +0.5 540 0 MAZ MXI1 RFX1 POLR2A ZNF341 ZBTB26 EZH2 ADGRA1-AS1 ADGRA1
GH10H133101 0.7 ENCODE 0.4 -12.8 -12781 0 SP3 KLF1 RFX1 MAX SP2 KLF17 BMI1 RFX5 ZFHX2 KLF9 GC10M133102 ADGRA1-AS1
GH10H133083 0.4 ENCODE 0.4 +5.3 5280 0 RFX1 MNT ADGRA1-AS1 ADGRA1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ADGRA1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ADGRA1-AS1 Gene

Chromosome:
10
Start:
133,083,073 bp from pter
End:
133,088,491 bp from pter
Size:
5,419 bases
Orientation:
Minus strand

Genomic View for ADGRA1-AS1 Gene

Genes around ADGRA1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADGRA1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADGRA1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADGRA1-AS1 Gene

Proteins for ADGRA1-AS1 Gene

Post-translational modifications for ADGRA1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADGRA1-AS1 Gene

Domains & Families for ADGRA1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADGRA1-AS1 Gene

Function for ADGRA1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADGRA1-AS1 Gene

Localization for ADGRA1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ADGRA1-AS1 Gene

Pathways & Interactions for ADGRA1-AS1 Gene

SuperPathways for ADGRA1-AS1 Gene

No Data Available

Interacting Proteins for ADGRA1-AS1 Gene

Gene Ontology (GO) - Biological Process for ADGRA1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADGRA1-AS1 Gene

Drugs & Compounds for ADGRA1-AS1 Gene

No Compound Related Data Available

Transcripts for ADGRA1-AS1 Gene

mRNA/cDNA for ADGRA1-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADGRA1-AS1 Gene

No ASD Table

Relevant External Links for ADGRA1-AS1 Gene

GeneLoc Exon Structure for
ADGRA1-AS1
ECgene alternative splicing isoforms for
ADGRA1-AS1

Expression for ADGRA1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ADGRA1-AS1 Gene

genes like me logo Genes that share expression patterns with ADGRA1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADGRA1-AS1 Gene

Orthologs for ADGRA1-AS1 Gene

Evolution for ADGRA1-AS1 Gene

ENSEMBL:
Gene Tree for ADGRA1-AS1 (if available)
TreeFam:
Gene Tree for ADGRA1-AS1 (if available)

No data available for Orthologs for ADGRA1-AS1 Gene

Paralogs for ADGRA1-AS1 Gene

No data available for Paralogs for ADGRA1-AS1 Gene

Variants for ADGRA1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADGRA1-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000579786 -- 133,087,796(+) GGCGG(C/T)CGCCC intron-variant, upstream-variant-2KB
rs1001667413 -- 133,085,123(+) CTAGG(A/C)ATTCT intron-variant, downstream-variant-500B
rs1001701506 -- 133,087,415(+) CTCTG(A/C/G)ATGCC intron-variant, upstream-variant-2KB
rs1001755613 -- 133,087,732(+) GGGTC(C/T)GGTGC intron-variant, upstream-variant-2KB
rs1002639617 -- 133,088,343(+) GCAGA(A/G)CAGGC intron-variant, upstream-variant-2KB

Relevant External Links for ADGRA1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADGRA1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ADGRA1-AS1 Gene

Disorders for ADGRA1-AS1 Gene

Relevant External Links for ADGRA1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ADGRA1-AS1

No disorders were found for ADGRA1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADGRA1-AS1 Gene

Publications for ADGRA1-AS1 Gene

No publications were found for ADGRA1-AS1 Gene.

Products for ADGRA1-AS1 Gene

Sources for ADGRA1-AS1 Gene

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