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ADCYAP1 Gene

protein-coding   GIFtS: 59

GC18P000895
adenylate cyclase activating polypeptide 1 (pituitary)
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
MGC126852 2
OTTHUMP00000162201 2
PACAP 1, 2, 3
Descriptions
adenylate cyclase activating polypeptide 2
adenylate cyclase activating polypeptide 1 (pituitary) 2
External Ids
HGNC: 2411
Entrez Gene: 1162
UniProtKB: P185093
Ensembl: ENSG000001414337
Search outside databases for aliases for ADCYAP1 gene

Previous GC identifers: GC18M001066 GC18P000892

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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EntrezGene summary for ADCYAP1:
This gene encodes adenylate cyclase activating polypeptide 1. Mediated by adenylate cyclase
activating polypeptide 1 receptors, this polypeptide stimulates adenylate cyclase and subsequently
increases the cAMP level in target cells. Adenylate cyclase activating polypeptide 1 is not only a
hypophysiotropic hormone, but also functions as a neurotransmitter and neuromodulator. In
addition, it plays a role in paracrine and autocrine regulation of certain types of cells. This
gene encodes three different mature peptides, including two isotypes, a shorter form and a longer
form. Two transcript variants encoding the same protein have been found for this gene. [provided
by RefSeq]

UniProtKB/Swiss-Prot: PACA_HUMAN, P18509
Function: Stimulates adenylate cyclase in pituitary cells

Gene Wiki entry for ADCYAP1 (Pituitary_adenylate_cyclase_activating_peptide)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ADCYAP1 gene  

Entrez Gene cytogenetic band: 18p11   Ensembl cytogenetic band:  18p11.32   HGNC cytogenetic band: 18p11

ADCYAP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 18         GeneLoc Exon Structure

GeneLoc location for GC18P000895:     (about GC identifiers)

Start:
894,944 bp from pter
End:
902,173 bp from pter
Size:
7,230 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000018.8  NT_010859.14  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: PACA_HUMAN, P18509 (See protein sequence)
Recommended Name: Pituitary adenylate cyclase-activating polypeptide precursor  
Size: 176 amino acids; 18835 Da
Subcellular location: Secreted
PDB structures from and Proteopedia :
1GEA (3D)    2D2P (3D)    2JOD (3D)    
Secondary accessions: B2R7N4 Q52LQ0

REFSEQ proteins (2 alternative transcripts): 
NP_001093203.1  NP_001108.2  


ENSEMBL proteins: 
ENSP00000383078 ENSP00000269200 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Browse Purified and Recombinant Proteins at Millipore
Sigma-Aldrich Proteins for ADCYAP1  
Browse R&D Systems for human recombinant proteins
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (PACAP)
Human Recombinant Proteins from Abnova (ADCYAP1)
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005576 extracellular region IEA--
GO:0005625 soluble fraction TAS10698193
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Antibodies for ADCYAP1: 
Invitrogen Antibodies for ADCYAP1
Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
Browse Antibodies at Sigma-Aldrich
Browse R&D Systems for Antibodies
Antibodies from Abcam (PACAP), each with their AbpromiseSM
Browse Abnova for Monoclonal and Polyclonal Antibodies
Search Novus for antibodies for ADCYAP1

Assays for ADCYAP1: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
Browse R&D Systems for biochemical assays
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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1 InterPro domain/family:
 IPR000532 Glucagon_GIP_secretin_VIP


   GeneDecks  ADCYAP1 for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry P18509

ProtoNet protein and cluster: P18509

1 Blocks protein family: IPB000532 Glucagon/GIP/secretin/VIP

UniProtKB/Swiss-Prot: PACA_HUMAN, P18509
Similarity: Belongs to the glucagon family

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADCYAP1)
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001099733

              Applied Biosystems Silencer® siRNAs for ADCYAP1

              Sigma-Aldrich siRNA for ADCYAP1  
                     Sigma-Aldrich shRNA for ADCYAP1  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Invitrogen Clones for ADCYAP1
Browse Clones for the Expression of Recombinant Proteins Available from Millipore
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001099733
                                 Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001099733
                                 untagged cDNA clones in CMV expression vector (see all 2): NM_001099733 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_001117

UniProtKB/Swiss-Prot: PACA_HUMAN, P18509
Function: Stimulates adenylate cyclase in pituitary cells

Genatlas biochemistry entry for ADCYAP1:
pituitary adenylyl cyclase activating polypeptide (glucagon,VIP family),including 2 isoforms
PACAP27 and PACAP38,expressed in the retinohypothalamus tract (RHT),acting as a pivotal modulator
of glutamatergic regulation of the suprachiasmatic circadian clock

10 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Adcyap1):

adipose tissuebehavior/neurologicalembryogenesisgrowth/sizehomeostasis/metabolism
lethality-postnatalliver/biliary systemmusclenervous systemreproductive system

1 Gene Ontology (GO) molecular function term (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005184 neuropeptide hormone activity TAS2302217
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(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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2 Invitrogen iPath™ Online BioAtlas - Pathways for ADCYAP1 (Maps provided by GeneGo):
 Gs-a Specific GPCRs (in brain)
 Gqa specific GPCRs (in brain)

   GeneDecks  ADCYAP1 for the pathways selected above  
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1 Millipore Pathway for ADCYAP1
 Adenylate cyclase-activating neuropeptides

   GeneDecks  ADCYAP1 for the pathways selected above  
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for  ADCYAP1  (Your Favorite Gene powered by Ingenuity) 
 Circadian Rhythm Signaling

   GeneDecks  ADCYAP1 for the pathways selected above  
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 Gene Network CentralTM Interacting Genes and Proteins Network for  ADCYAP1 


5/37 Interacting proteins for ADCYAP1 (ENSP000002692003) via UniProtKB, MINT, and/or STRING (see all 37 )
InteractantInteraction Details
GeneCardExternal ID(s)
ADCYAP1R1ENSP000003066203STRING (score=.996)
VIPR2ENSP000002621783STRING (score=.994)
VIPR1ENSP000003272463STRING (score=.992)
DUSP2ENSP000002889433STRING (score=.953)
NTRK1ENSP000003514863STRING (score=.949)
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5 Gene Ontology (GO) biological process terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway EXP16939974
GO:0007190 activation of adenylate cyclase activity TAS1730060
GO:0007267 cell-cell signaling TAS2302217
GO:0007565 female pregnancy TAS10698193
GO:0045786 negative regulation of cell cycle IEA--
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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
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Enzo Life Sciences drugs & compounds for ADCYAP1
Browse Small Molecules at Sigma-Aldrich

Compounds for ADCYAP1 available from Tocris Bioscience
CompoundAction CAS number
PACAP 1-38Potent stimulator of adenylyl cyclase
PACAP 1-27Potent stimulator of adenylyl cyclase[137061-48-4]
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10/47 Novoseek chemical compound relationships for ADCYAP1 gene (see all 47 )
Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
pacap 38 96.31 239 12147212 (9), 8752106 (8), 9829998 (7), 15870074 (6) (see all 54)
helospectin 81.48 17 7761627 (5), 8897643 (2), 8564257 (2), 7914821 (1) (see all 6)
forskolin 74.36 57 10595920 (2), 15882914 (2), 10646500 (2), 16455786 (2) (see all 38)
helospectin i 72.88 8 8680719 (3), 7914821 (3)
cyclic amp 72.36 115 15800375 (5), 8857610 (4), 8752106 (4), 9681437 (4) (see all 35)
apamin 49.28 7 8071835 (2), 8680719 (1), 8751083 (1), 11207070 (1)
2',5'-dideoxyadenosine 49.03 2 10414962 (1)
dbc-amp 45.57 9 15308290 (3), 8857610 (1), 12692897 (1), 15605988 (1) (see all 5)
ghrp 44.64 6 1346381 (4), 8721987 (1)
catecholamine 43.82 36 15518890 (3), 10567198 (3), 8993404 (2), 10974664 (2) (see all 18)
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(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADCYAP1)
Browse for Gene Knock-down Tools from Millipore
Browse Abnova for Chimera RNAi Products
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_001099733

              Sigma-Aldrich siRNA for ADCYAP1  
                     Sigma-Aldrich shRNA for ADCYAP1  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_001099733  NM_001117  

REFSEQ mRNAs for ADCYAP1 gene (2 alternative transcripts): 

NM_001099733.1   NM_001117.3   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_001099733  NM_001117  

               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2): NM_001099733
                                 Myc/DDK tagged cDNA clones in CMV expression vector (see all 2): NM_001099733
                                 untagged cDNA clones in CMV expression vector (see all 2): NM_001099733 

Additional cDNA sequence: 

AK095723.1 AK294233.1 AK313050.1 BC093837.1 BC101803.1 CR603595.1 S83513.1 

7 DOTS entries:

DT.110319  DT.405957  DT.95288570  DT.91988881  DT.100759469  DT.100022840  DT.100746685 

24/61 AceView cDNA sequences (see all 61 ):

BE220888 CR603595 BI793247 AV703144 AI697629 CD244263 T11038 AI932543 
BM142346 AA379639 BU783065 BM142250 BF513900 BU789076 BU579487 BF448881 
BM354129 BQ549183 AA081575 BM354004 CK820263 BU071058 CK820262 NM_001117 

highest scoring ESTs for ADCYAP1:

AA081575 AA379639 AA772782 AA772803 AL580406 AW590448 AW960236 BE049305 BF432289 BF513900 

Unigene Cluster for ADCYAP1:

Adenylate cyclase activating polypeptide 1 (pituitary)
Hs.531719  [show with all ESTs]
Unigene Representative Sequence: AK095723


GeneLoc Exon Structure

2 Ensembl transcripts including schematic representations:
ENST00000400219  ENST00000269200  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

ADCYAP1 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for ADCYAP1

1 / 2 / 3

6 probe-sets matching ADCYAP1 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

48934_at2 U95-B 1 1.00 1.00 0.99 0.81 -- -- -- -- --
36754_at2, 3 U95-A 1 1.00 1.00 0.85 1.22 X60435 0.20 1.00 0.72 1

230237_at2 U133-B 1 1.00 1.00 -- -- -- -- -- -- --

206281_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001117 0.60 1.00 0.82 1

230237_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

206281_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
GeneDecks  ADCYAP1 for binary patterns associated with the probe-sets selected above  
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Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: --

SOURCE GeneReport for Unigene cluster: Hs.531719

Expression variation in blood from EXPOLDB for ADCYAP1

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for ADCYAP1 gene from 5/9 species (see all 9 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
ADCYAP11   -- adenylate cyclase activating polypeptide 1 (pituitary) 89.39(n)
85.8(a)
607433  XM_844098.1  XP_849191.1 
chimpanzee
(Pan troglodytes)
ADCYAP11   -- adenylate cyclase activating polypeptide 1 (pituitary) 94.89(n)
90.34(a)
468489  XM_001147286.1  XP_001147286.1 
cow
(Bos taurus)
ADCYAP11   -- adenylate cyclase activating polypeptide 1 (pituitary) 82.95(n)
77.27(a)
615187  NM_001046555.1  NP_001040020.1 
rat
(Rattus norvegicus)
Adcyap11   -- adenylate cyclase activating polypeptide 1 (pituitary) 85.52(n)
82.29(a)
24166  NM_016989.1  NP_058685.1 
mouse
(Mus musculus)
Adcyap11, 5 175
adenylate cyclase activating polypeptide 11, 5 85.52(n)1
82.86(a)1
115161  NM_009625.21  NP_033755.11 
 AB0101495  AI3234345  (see all 10)
About this table        Species with no ortholog for ADCYAP1

ENSEMBL Gene Tree for ADCYAP1
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for ADCYAP1 gene
VIP2  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section


10/98 NCBI SNPs in ADCYAP1 are shown (see all 98 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 81)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 18 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs18931541,2
A,C,F,H895125(-) CGCGAC/TGCCAA 2 -- ng51 int1 tfbs36Minor allele frequency- T:0.25NA EU EA WA 586
rs28465831,2
A,C,F,H892965(+) AAGCAA/TGCAGA 1 -- ng514Minor allele frequency- T:0.22EU EA WA 396
rs16100371,2
A,C,F,H900635(+) TCCCAA/GTGGTC 2 -- ut31 ese39Minor allele frequency- G:0.21MN EU EA WA 1020
rs28465841,2
A,C,F,H894054(+) AGCTCC/TGATTG 2 -- ng514Minor allele frequency- T:0.37EA EU 1778
rs28569661,2
C,F,H897710(+) CTTCGA/GTGGCT 2 D/G mis14Minor allele frequency- G:0.11EU EA WA 410
--
rs22311891,2
C,F,H899669(+) ACAGCC/TCTGAC 2 -- ut31 ese38Minor allele frequency- T:0.03EU EA WA 838
rs28569651,2
A,C894097(+) TAATTA/GTATAG 2 -- ng510--------
--
rs26889981,2
A,C893424(+) TTCTCA/GCCCCA 2 -- ng510--------
rs22311811,2
A,C894766(+) TCCGCC/GCTTCA 2 -- ng510--------
rs26889991,2
A,C893429(+) ACCCCA/CAAATT 2 -- ng510--------
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HapMap Linkage Disequilibrium images for ADCYAP1 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 102980

10/70 Novoseek disease relationships for ADCYAP1 gene (see all 70 )

Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
gulf war syndrome 57.04 1 15922114 (1)
pituitary adenoma 38.53 24 9846969 (5), 10595920 (3), 9285938 (3), 7527412 (2) (see all 6)
pituitary adenoma nonfunctioning 35.72 1 8547947 (1)
pheochromocytoma 35.24 8 2175177 (2), 7759058 (1), 12438166 (1), 10567198 (1) (see all 6)
sudden infant death syndrome 34.10 5 19120039 (2), 18589006 (1), 15922114 (1)
cholera 27.72 5 1337557 (1), 15109935 (1), 1309195 (1), 11476937 (1)
prolactinoma 26.27 3 7479307 (1), 9846969 (1)
shock septic 26.05 10 12794054 (2), 18650785 (2), 11792830 (1), 18098289 (1) (see all 6)
pituitary tumors 23.80 4 7479307 (1), 19236332 (1)
chronic fatigue syndrome 21.95 1 15922114 (1)
About this table

Genetic Association Database: ADCYAP1
Human Genome Epidemiology Navigator: ADCYAP1 (7 documents)

(Possibly Related Articles in Doctor's Guide)
About This Section

  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
About This Section

10/504 PubMed articles for ADCYAP1 gene (see all 504 ):
(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 116 HGNC: 241 AceView: ADCYAP1 Ensembl:ENSG00000141433 euGenes: HUgn116
ECgene: ADCYAP1 H-InvDB: ADCYAP1
(According to HUGE)
About This Section

  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

  --
(Available from WIS Yeda, Salk, Tufts)
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  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for ADCYAP1:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



  Invitrogen iPath Pathways  Invitrogen BLOCK-iT™ RNAi
  Invitrogen Antibodies  Invitrogen Assays
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 Predesigned and custom siRNAs for ADCYAP1 Browse antibodies at Sigma-Aldrich
 Explore super-pooled esiRNAs Proteins for ADCYAP1
 Lentivirus-delivered shRNAs for ADCYAP1 Browse small molecules at Sigma-Aldrich
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 Drugs for ADCYAP1
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 Search Novus for antibodies for ADCYAP1

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