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Aliases & Descriptions for ADCYAP1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases MGC126852 2 OTTHUMP00000162201 2 PACAP 1 , 2 , 3
Descriptions adenylate cyclase activating polypeptide 2 adenylate cyclase activating polypeptide 1 (pituitary) 2
Search outside databases for aliases for ADCYAP1 genePrevious GC identifers: GC18M001066 GC18P000892
Summaries for ADCYAP1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ADCYAP1 : This gene encodes adenylate cyclase activating polypeptide 1. Mediated by adenylate cyclaseactivating polypeptide 1 receptors, this polypeptide stimulates adenylate cyclase and subsequentlyincreases the cAMP level in target cells. Adenylate cyclase activating polypeptide 1 is not only ahypophysiotropic hormone, but also functions as a neurotransmitter and neuromodulator. Inaddition, it plays a role in paracrine and autocrine regulation of certain types of cells. Thisgene encodes three different mature peptides, including two isotypes, a shorter form and a longerform. Two transcript variants encoding the same protein have been found for this gene. [providedby RefSeq] UniProtKB/Swiss-Prot: PACA_HUMAN, P18509 Function : Stimulates adenylate cyclase in pituitary cells
Gene Wiki entry for ADCYAP1 (Pituitary_adenylate_cyclase_activating_peptide)
Genomic Location for ADCYAP1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ADCYAP1 gene Entrez Gene cytogenetic band: 18p11 Ensembl cytogenetic band: 18p11.32 HGNC cytogenetic band: 18p11 ADCYAP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 18 GeneLoc Exon Structure
GeneLoc location for GC18P000895:
(about GC identifiers )
Start:
894,944 bp from pter
End:
902,173 bp from pter
Size:
7,230 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000018.8 NT_010859.14 Proteins for ADCYAP1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: PACA_HUMAN, P18509 (See
protein sequence )Recommended Name: Pituitary adenylate cyclase-activating polypeptide precursor Size : 176 amino acids; 18835 Da
Subcellular location : Secreted
PDB structures from and Proteopedia : 1GEA (3D)
 2D2P (3D)
 2JOD (3D)
 
Secondary accessions : B2R7N4 Q52LQ0
REFSEQ proteins (2 alternative transcripts):
NP_001093203.1 NP_001108.2 ENSEMBL proteins: ENSP00000383078 ENSP00000269200 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ADCYAP1: Assays for ADCYAP1:
Protein
Domains/ Families for ADCYAP1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P18509 ProtoNet protein and cluster: P18509
1 Blocks protein family : IPB000532 Glucagon/GIP/secretin/VIP UniProtKB/Swiss-Prot: PACA_HUMAN, P18509 Similarity : Belongs to the glucagon family
Gene Function for ADCYAP1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
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Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001099733 Applied Biosystems Silencer ® siRNAs for ADCYAP1 Sigma-Aldrich siRNA for ADCYAP1 Sigma-Aldrich shRNA for ADCYAP1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001117 UniProtKB/Swiss-Prot: PACA_HUMAN, P18509 Function : Stimulates adenylate cyclase in pituitary cells
Genatlas biochemistry entry for ADCYAP1 :pituitary adenylyl cyclase activating polypeptide (glucagon,VIP family),including 2 isoformsPACAP27 and PACAP38,expressed in the retinohypothalamus tract (RHT),acting as a pivotal modulatorof glutamatergic regulation of the suprachiasmatic circadian clock
10 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Adcyap1) :1 Gene Ontology (GO) molecular function term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005184 neuropeptide hormone activity
TAS 2302217
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Pathways & Interactions for ADCYAP1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for ADCYAP1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ADCYAP1 5/37 Interacting proteins for ADCYAP1 (ENSP00000269200 3 ) via UniProtKB, MINT, and/or STRING (see all 37
)About this table 5 Gene Ontology (GO) biological process terms (links to tree view) :
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Drugs & Compounds for ADCYAP1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for ADCYAP1
Compounds for ADCYAP1 available from Tocris Bioscience Compound Action
CAS
number PACAP 1-38 Potent stimulator of adenylyl cyclase PACAP 1-27 Potent stimulator of adenylyl cyclase [137061-48-4]
About this table 10/47 Novoseek chemical compound relationships for ADCYAP1 gene (see all 47
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
pacap 38
96.31
239
12147212 (9), 8752106 (8), 9829998 (7), 15870074 (6) (see all 54 )
helospectin
81.48
17
7761627 (5), 8897643 (2), 8564257 (2), 7914821 (1) (see all 6 )
forskolin
74.36
57
10595920 (2), 15882914 (2), 10646500 (2), 16455786 (2) (see all 38 )
helospectin i
72.88
8
8680719 (3), 7914821 (3)
cyclic amp
72.36
115
15800375 (5), 8857610 (4), 8752106 (4), 9681437 (4) (see all 35 )
apamin
49.28
7
8071835 (2), 8680719 (1), 8751083 (1), 11207070 (1)
2',5'-dideoxyadenosine
49.03
2
10414962 (1)
dbc-amp
45.57
9
15308290 (3), 8857610 (1), 12692897 (1), 15605988 (1) (see all 5 )
ghrp
44.64
6
1346381 (4), 8721987 (1)
catecholamine
43.82
36
15518890 (3), 10567198 (3), 8993404 (2), 10974664 (2) (see all 18 )
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Transcripts for ADCYAP1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
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shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001099733 Sigma-Aldrich siRNA for ADCYAP1 Sigma-Aldrich shRNA for ADCYAP1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001099733 NM_001117
REFSEQ mRNAs for ADCYAP1 gene (2 alternative transcripts): NM_001099733.1 NM_001117.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001099733 NM_001117
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001099733  
Additional cDNA sequence: AK095723.1 AK294233.1 AK313050.1 BC093837.1 BC101803.1 CR603595.1 S83513.1
7 DOTS entries : DT.110319 DT.405957 DT.95288570 DT.91988881 DT.100759469 DT.100022840 DT.100746685
24/61 AceView cDNA sequences (see all 61
):BE220888 CR603595 BI793247 AV703144 AI697629 CD244263 T11038 AI932543 BM142346 AA379639 BU783065 BM142250 BF513900 BU789076 BU579487 BF448881 BM354129 BQ549183 AA081575 BM354004 CK820263 BU071058 CK820262 NM_001117
highest scoring ESTs for ADCYAP1 :AA081575 AA379639 AA772782 AA772803 AL580406 AW590448 AW960236 BE049305 BF432289 BF513900
Unigene Cluster for ADCYAP1: Adenylate cyclase activating polypeptide 1 (pituitary) Hs.531719 [show with all ESTs ] Unigene Representative Sequence: AK095723 GeneLoc Exon Structure 2 Ensembl transcripts including schematic representations : ENST00000400219
ENST00000269200
Expression for ADCYAP1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ADCYAP1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ADCYAP1 1 / 2 / 3
6 probe-sets matching ADCYAP1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.531719 Expression variation in blood from EXPOLDB for ADCYAP1
Orthologs for ADCYAP1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ADCYAP1 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for ADCYAP1 ENSEMBL Gene Tree for ADCYAP1 Paralogs for ADCYAP1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ADCYAP1 gene VIP 2
SNPs/Variants for ADCYAP1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ADCYAP1 (up to first 250kb)
Disorders & Mutations for ADCYAP1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 102980 10/70 Novoseek disease relationships for ADCYAP1 gene (see all 70
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
gulf war syndrome
57.04
1
15922114 (1)
pituitary adenoma
38.53
24
9846969 (5), 10595920 (3), 9285938 (3), 7527412 (2) (see all 6 )
pituitary adenoma nonfunctioning
35.72
1
8547947 (1)
pheochromocytoma
35.24
8
2175177 (2), 7759058 (1), 12438166 (1), 10567198 (1) (see all 6 )
sudden infant death syndrome
34.10
5
19120039 (2), 18589006 (1), 15922114 (1)
cholera
27.72
5
1337557 (1), 15109935 (1), 1309195 (1), 11476937 (1)
prolactinoma
26.27
3
7479307 (1), 9846969 (1)
shock septic
26.05
10
12794054 (2), 18650785 (2), 11792830 (1), 18098289 (1) (see all 6 )
pituitary tumors
23.80
4
7479307 (1), 19236332 (1)
chronic fatigue syndrome
21.95
1
15922114 (1)
About this table Genetic Association Database: ADCYAP1 Human Genome Epidemiology Navigator: ADCYAP1 (7 documents)
Medical News for ADCYAP1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ADCYAP1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/504 PubMed articles for ADCYAP1 gene (see all 504
): Structure of the human pituitary adenylate cyclase activating polypeptide (PACAP) gene. (PubMed id 1730060) 1, 2, 3, 4 Hosoya M.... Fujino M. (1992) Genetic variation screening and association studies of the adenylate cyclase activating polypeptide 1 (ADCYAP1) gene in patients with type 2 diabetes. (PubMed id 11968092) 3, 4, 6 Gu H.F. (2002) Primary structure and characterization of the precursor to human pituitary adenylate cyclase activating polypeptide. (PubMed id 1739432) 1, 3, 4 Ohkubo S.... Fujino M. (1992) A novel peptide which stimulates adenylate cyclase: molecular cloning and characterization of the ovine and human cDNAs. (PubMed id 2302217) 1, 3, 4 Kimura C.... Fujino M. (1990) Association analysis of the pituitary adenyl cyclase activating peptide gene (PACAP) on chromosome 18p11 with schizophrenia and bipolar disorders. (PubMed id 11515750) 1, 3, 6 Ishiguro H....Arinami T. (2001) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Solution structure of pituitary adenylate cyclase activating polypeptide by nuclear magnetic resonance spectroscopy. (PubMed id 8504103) 3, 4 Wray V.... Naruse S. (1993) Pituitary adenylate cyclase activating polypeptide (PACAP) with 27 residues. Conformation determined by 1H NMR and CD spectroscopies and distance geometry in 25% methanol solution. (PubMed id 1483839) 3, 4 Inooka H.... Fujino M. (1992) PACAP is expressed in secretory granules of insulin and glucagon cells in human and rodent pancreas. Evidence for generation of cAMP compartments uncoupled from hormone release in diabetic islets. (PubMed id 12686458) 1, 3 Portela-Gomes G.M....Abdel-Halim S.M. (2003) Pituitary adenylate cyclase-activating polypeptide (PACAP) and PACAP-receptor type 1 expression in rat and human placenta. (PubMed id 10698193) 1, 3 Scaldaferri M.L....Moretti C. (2000)
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Genome Databases showing ADCYAP1
(According to
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ADCYAP1
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Specialized Databases showing ADCYAP1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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