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Aliases for ADAMTS9-AS1 Gene

Subcategory (RNA class) for ADAMTS9-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ADAMTS9-AS1 Gene

  • ADAMTS9 Antisense RNA 1 2 3 5
  • ADAMTS9 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ADAMTS9-AS1 Gene

Summaries for ADAMTS9-AS1 Gene

GeneCards Summary for ADAMTS9-AS1 Gene

ADAMTS9-AS1 (ADAMTS9 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADAMTS9-AS1 Gene

Genomics for ADAMTS9-AS1 Gene

Regulatory Elements for ADAMTS9-AS1 Gene

Enhancers for ADAMTS9-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F064594 0.7 Ensembl ENCODE 16.5 +34.3 34264 1.4 JUN RAD21 NR2F2 ADAMTS9-AS1 ADAMTS9 GC03P064577 GC03P064578 ADAMTS9-AS2
GH03F064611 0.8 Ensembl ENCODE 10.5 +51.5 51548 1.8 SCRT2 REST ETV6 RAD21 NR2F2 ADAMTS9-AS1 GC03P064577 GC03P064578 ADAMTS9-AS2
GH03F064864 0.3 FANTOM5 9.8 +303.5 303548 0.0 ADAMTS9-AS1 LOC105377124 ADAMTS9
GH03F064539 0.2 ENCODE 11.2 -21.6 -21623 1.4 RNU6-739P ADAMTS9-AS1
GH03F064560 0.4 ENCODE 5.5 +0.1 63 2.0 HLF ETV6 ADAMTS9-AS1 GC03P064577 GC03P064578
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ADAMTS9-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ADAMTS9-AS1 Gene

64,561,322 bp from pter
64,592,757 bp from pter
31,436 bases
Plus strand

Genomic View for ADAMTS9-AS1 Gene

Genes around ADAMTS9-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADAMTS9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADAMTS9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADAMTS9-AS1 Gene

Proteins for ADAMTS9-AS1 Gene

Post-translational modifications for ADAMTS9-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADAMTS9-AS1 Gene

Domains & Families for ADAMTS9-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADAMTS9-AS1 Gene

Function for ADAMTS9-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADAMTS9-AS1 Gene

Localization for ADAMTS9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ADAMTS9-AS1 Gene

Pathways & Interactions for ADAMTS9-AS1 Gene

SuperPathways for ADAMTS9-AS1 Gene

No Data Available

Interacting Proteins for ADAMTS9-AS1 Gene

Gene Ontology (GO) - Biological Process for ADAMTS9-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ADAMTS9-AS1 Gene

Transcripts for ADAMTS9-AS1 Gene

mRNA/cDNA for ADAMTS9-AS1 Gene

(20) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADAMTS9-AS1 Gene

No ASD Table

Relevant External Links for ADAMTS9-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ADAMTS9-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ADAMTS9-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ADAMTS9-AS1 Gene

This gene is overexpressed in Kidney - Cortex (x10.2), Esophagus - Muscularis (x4.8), and Colon - Sigmoid (x4.4).
genes like me logo Genes that share expression patterns with ADAMTS9-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ADAMTS9-AS1 Gene

Orthologs for ADAMTS9-AS1 Gene

Evolution for ADAMTS9-AS1 Gene

Gene Tree for ADAMTS9-AS1 (if available)
Gene Tree for ADAMTS9-AS1 (if available)

No data available for Orthologs for ADAMTS9-AS1 Gene

Paralogs for ADAMTS9-AS1 Gene

No data available for Paralogs for ADAMTS9-AS1 Gene

Variants for ADAMTS9-AS1 Gene

Sequence variations from dbSNP and Humsavar for ADAMTS9-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10530703 -- 64,572,059(+) AAGCC(-/A/AAA/AAAG)TCCTA intron-variant
rs10632397 -- 64,561,064(+) CCATC(-/CTT)CTTTT intron-variant, upstream-variant-2KB
rs11130973 -- 64,572,444(+) CGAAT(A/T)TGGGT intron-variant
rs11130974 -- 64,578,803(+) ACCCC(A/G)TAGTC intron-variant
rs111315732 -- 64,570,694(+) CCGTC(A/T)CAAAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ADAMTS9-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv834718 CNV gain 17160897
dgv289n21 CNV gain 19592680

Relevant External Links for ADAMTS9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ADAMTS9-AS1 Gene

Disorders for ADAMTS9-AS1 Gene

Relevant External Links for ADAMTS9-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ADAMTS9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADAMTS9-AS1 Gene

Publications for ADAMTS9-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ADAMTS9-AS1 Gene

Sources for ADAMTS9-AS1 Gene

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