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Aliases for ADAMTS7P1 Gene

Aliases for ADAMTS7P1 Gene

  • ADAMTS7 Pseudogene 1 2 3 5
  • ADAMTS7 Pseudogene 2 2 3
  • ADAM Metallopeptidase With Thrombospondin Type 1 Motif, 7 Pseudogene 3
  • ADAMTS7P2 3

External Ids for ADAMTS7P1 Gene

Previous HGNC Symbols for ADAMTS7P1 Gene

  • ADAMTS7P2

Previous GeneCards Identifiers for ADAMTS7P1 Gene

  • GC15P082587

Summaries for ADAMTS7P1 Gene

GeneCards Summary for ADAMTS7P1 Gene

ADAMTS7P1 (ADAMTS7 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADAMTS7P1 Gene

Genomics for ADAMTS7P1 Gene

Regulatory Elements for ADAMTS7P1 Gene

Enhancers for ADAMTS7P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G082299 0.2 Ensembl 0.4 +6.4 6418 0.2 ADAMTS7P1 GC15P082315
GH15G082298 0.2 Ensembl 0.4 +5.3 5318 0.4 ADAMTS7P1 GC15P082315
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ADAMTS7P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ADAMTS7P1 Gene

Chromosome:
15
Start:
82,293,283 bp from pter
End:
82,334,609 bp from pter
Size:
41,327 bases
Orientation:
Plus strand

Genomic View for ADAMTS7P1 Gene

Genes around ADAMTS7P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ADAMTS7P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ADAMTS7P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADAMTS7P1 Gene

Proteins for ADAMTS7P1 Gene

Post-translational modifications for ADAMTS7P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ADAMTS7P1 Gene

Domains & Families for ADAMTS7P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ADAMTS7P1 Gene

Function for ADAMTS7P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ADAMTS7P1 Gene

Localization for ADAMTS7P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ADAMTS7P1 Gene

Pathways & Interactions for ADAMTS7P1 Gene

SuperPathways for ADAMTS7P1 Gene

No Data Available

Interacting Proteins for ADAMTS7P1 Gene

Gene Ontology (GO) - Biological Process for ADAMTS7P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ADAMTS7P1 Gene

Drugs & Compounds for ADAMTS7P1 Gene

No Compound Related Data Available

Transcripts for ADAMTS7P1 Gene

mRNA/cDNA for ADAMTS7P1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ADAMTS7P1 Gene

No ASD Table

Relevant External Links for ADAMTS7P1 Gene

GeneLoc Exon Structure for
ADAMTS7P1
ECgene alternative splicing isoforms for
ADAMTS7P1

Expression for ADAMTS7P1 Gene

mRNA differential expression in normal tissues according to GTEx for ADAMTS7P1 Gene

This gene is overexpressed in Brain - Cortex (x5.7), Testis (x5.2), and Brain - Hypothalamus (x4.7).

NURSA nuclear receptor signaling pathways regulating expression of ADAMTS7P1 Gene:

ADAMTS7P1

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ADAMTS7P1 Gene

Orthologs for ADAMTS7P1 Gene

Evolution for ADAMTS7P1 Gene

ENSEMBL:
Gene Tree for ADAMTS7P1 (if available)
TreeFam:
Gene Tree for ADAMTS7P1 (if available)

No data available for Orthologs for ADAMTS7P1 Gene

Paralogs for ADAMTS7P1 Gene

No data available for Paralogs for ADAMTS7P1 Gene

Variants for ADAMTS7P1 Gene

Sequence variations from dbSNP and Humsavar for ADAMTS7P1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000112707 -- 82,322,950(+) AGGCA(-/G)GTGGG intron-variant
rs1000348593 -- 82,311,123(+) TGATT(A/G)AACTG intron-variant
rs1000764819 -- 82,327,842(+) GGCTT(C/T)TCTCC nc-transcript-variant
rs1000827001 -- 82,325,132(+) TTATG(A/G)TCCTC intron-variant
rs1000944752 -- 82,332,851(+) CAGGG(C/G)ATGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ADAMTS7P1 Gene

Variant ID Type Subtype PubMed ID
dgv457e214 CNV gain 21293372
dgv4682n54 CNV gain 21841781
nsv1041040 CNV gain 25217958
nsv1069870 CNV deletion 25765185
nsv1069871 CNV deletion 25765185
nsv1120052 OTHER inversion 24896259
nsv1136197 CNV deletion 24896259
nsv570248 CNV loss 21841781

Relevant External Links for ADAMTS7P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ADAMTS7P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ADAMTS7P1 Gene

Disorders for ADAMTS7P1 Gene

Relevant External Links for ADAMTS7P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ADAMTS7P1

No disorders were found for ADAMTS7P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ADAMTS7P1 Gene

Publications for ADAMTS7P1 Gene

No publications were found for ADAMTS7P1 Gene.

Products for ADAMTS7P1 Gene

Sources for ADAMTS7P1 Gene

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