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Aliases for ADAMTS3 Gene

Aliases for ADAMTS3 Gene

  • ADAM Metallopeptidase With Thrombospondin Type 1 Motif, 3 2 3
  • A Disintegrin-Like And Metalloprotease (Reprolysin Type) With Thrombospondin Type 1 Motif, 3 2 3
  • Procollagen II Amino Propeptide-Processing Enzyme 3 4
  • Procollagen II N-Proteinase 3 4
  • ADAM-TS 3 3 4
  • ADAMTS-3 3 4
  • PC II-NP 3 4
  • ADAM-TS3 3 4
  • A Disintegrin And Metalloproteinase With Thrombospondin Motifs 3 3
  • Zinc Metalloendopeptidase 3
  • EC 3.4.24.14 63
  • EC 3.4.24.- 4
  • EC 3.4.24 63
  • ADAMTS-4 3
  • KIAA0366 4

External Ids for ADAMTS3 Gene

Summaries for ADAMTS3 Gene

Entrez Gene Summary for ADAMTS3 Gene

  • This gene encodes a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family. Members of the family share several distinct protein modules, including a propeptide region, a metalloproteinase domain, a disintegrin-like domain, and a thrombospondin type 1 (TS) motif. Individual members of this family differ in the number of C-terminal TS motifs, and some have unique C-terminal domains. The protein encoded by this gene is the major procollagen II N-propeptidase. A deficiency of this protein may be responsible for dermatosparaxis, a genetic defect of connective tissues. [provided by RefSeq, Jul 2008]

GeneCards Summary for ADAMTS3 Gene

ADAMTS3 (ADAM Metallopeptidase With Thrombospondin Type 1 Motif, 3) is a Protein Coding gene. Among its related pathways are Degradation of the extracellular matrix and Collagen biosynthesis and modifying enzymes. GO annotations related to this gene include heparin binding and metalloendopeptidase activity. An important paralog of this gene is ADAMTS16.

UniProtKB/Swiss-Prot for ADAMTS3 Gene

  • Cleaves the propeptides of type II collagen prior to fibril assembly. Does not act on types I and III collagens

Gene Wiki entry for ADAMTS3 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ADAMTS3 Gene

Genomics for ADAMTS3 Gene

Genomic Location for ADAMTS3 Gene

Start:
72,280,969 bp from pter
End:
72,568,799 bp from pter
Size:
287,831 bases
Orientation:
Minus strand

Genomic View for ADAMTS3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ADAMTS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ADAMTS3 Gene

Regulatory Elements for ADAMTS3 Gene

Proteins for ADAMTS3 Gene

  • Protein details for ADAMTS3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O15072-ATS3_HUMAN
    Recommended name:
    A disintegrin and metalloproteinase with thrombospondin motifs 3
    Protein Accession:
    O15072
    Secondary Accessions:
    • A1L3U9
    • Q9BXZ8

    Protein attributes for ADAMTS3 Gene

    Size:
    1205 amino acids
    Molecular mass:
    135603 Da
    Cofactor:
    Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.;
    Quaternary structure:
    No Data Available

neXtProt entry for ADAMTS3 Gene

Proteomics data for ADAMTS3 Gene at MOPED

Post-translational modifications for ADAMTS3 Gene

  • Glycosylated. Can be O-fucosylated by POFUT2 on a serine or a threonine residue found within the consensus sequence C1-X(2)-(S/T)-C2-G of the TSP type-1 repeat domains where C1 and C2 are the first and second cysteine residue of the repeat, respectively. Fucosylated repeats can then be further glycosylated by the addition of a beta-1,3-glucose residue by the glucosyltransferase, B3GALTL. Fucosylation mediates the efficient secretion of ADAMTS family members. Also can be C-glycosylated with one or two mannose molecules on tryptophan residues within the consensus sequence W-X-X-W of the TPRs, and N-glycosylated. These other glycosylations can also facilitate secretion (By similarity).
  • The precursor is cleaved by a furin endopeptidase.
  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn83, Asn119, Asn242, Asn345, Asn475, Asn814, Asn942, Thr1087, Ser1088, Ser1094, Thr1096, Thr1146, Ser1149, Ser1150, and Thr1153

Other Protein References for ADAMTS3 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

Domains for ADAMTS3 Gene

Gene Families for ADAMTS3 Gene

HGNC:
  • ADAMTS :ADAM metallopeptidases with thrombospondin type 1 motif
IUPHAR :

Suggested Antigen Peptide Sequences for ADAMTS3 Gene

Graphical View of Domain Structure for InterPro Entry

O15072

UniProtKB/Swiss-Prot:

ATS3_HUMAN
Domain:
  • The spacer domain and the TSP type-1 domains are important for a tight interaction with the extracellular matrix:
    • O15072
  • Contains 1 disintegrin domain.:
    • O15072
  • Contains 1 peptidase M12B domain.:
    • O15072
  • Contains 1 PLAC domain.:
    • O15072
  • Contains 4 TSP type-1 domains.:
    • O15072
genes like me logo Genes that share domains with ADAMTS3: view

Function for ADAMTS3 Gene

Molecular function for ADAMTS3 Gene

GENATLAS Biochemistry: a disintegrin-like and metalloprotease domain (reprolysin type) with thrombospondin type 1 motif 3,extracellular matrix protein
UniProtKB/Swiss-Prot Function: Cleaves the propeptides of type II collagen prior to fibril assembly. Does not act on types I and III collagens

Enzyme Numbers (IUBMB) for ADAMTS3 Gene

Gene Ontology (GO) - Molecular Function for ADAMTS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004175 endopeptidase activity IDA 24552833
GO:0004222 metalloendopeptidase activity NAS 11812023
GO:0005515 protein binding IPI 24552833
GO:0008201 heparin binding IEA --
GO:0008233 peptidase activity --
genes like me logo Genes that share ontologies with ADAMTS3: view

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ADAMTS3 Gene

Localization for ADAMTS3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ADAMTS3 Gene

Secreted, extracellular space, extracellular matrix.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ADAMTS3 Gene COMPARTMENTS Subcellular localization image for ADAMTS3 gene
Compartment Confidence
extracellular 5
plasma membrane 2
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for ADAMTS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005578 proteinaceous extracellular matrix NAS 11812023
GO:0005615 extracellular space IDA 24552833
GO:0031012 colocalizes_with extracellular matrix TAS 22261194
GO:0070062 extracellular exosome IDA 19199708
genes like me logo Genes that share ontologies with ADAMTS3: view

Pathways for ADAMTS3 Gene

genes like me logo Genes that share pathways with ADAMTS3: view

Pathways by source for ADAMTS3 Gene

Interacting Proteins for ADAMTS3 Gene

STRING Interaction Network Preview (showing 4 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000286657%0d%0a9606.ENSP00000061240%0d%0a9606.ENSP00000305714%0d%0a9606.ENSP00000223061%0d%0a9606.ENSP00000295992%0d%0a
Selected Interacting proteins: ENSP00000286657 for ADAMTS3 Gene via STRING

Gene Ontology (GO) - Biological Process for ADAMTS3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis --
GO:0010573 vascular endothelial growth factor production IDA 24552833
GO:0016485 protein processing IDA 11408482
GO:0030198 extracellular matrix organization TAS --
GO:0030199 collagen fibril organization NAS 11812023
genes like me logo Genes that share ontologies with ADAMTS3: view

Transcripts for ADAMTS3 Gene

Unigene Clusters for ADAMTS3 Gene

ADAM metallopeptidase with thrombospondin type 1 motif, 3:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ADAMTS3 Gene

No ASD Table

Relevant External Links for ADAMTS3 Gene

GeneLoc Exon Structure for
ADAMTS3
ECgene alternative splicing isoforms for
ADAMTS3

Expression for ADAMTS3 Gene

mRNA expression in normal human tissues for ADAMTS3 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ADAMTS3 Gene

This gene is overexpressed in Fallopian Tube (4.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ADAMTS3 Gene

SOURCE GeneReport for Unigene cluster for ADAMTS3 Gene Hs.590919

mRNA Expression by UniProt/SwissProt for ADAMTS3 Gene

O15072-ATS3_HUMAN
Tissue specificity: Found in cartilage and skin
genes like me logo Genes that share expressions with ADAMTS3: view

Orthologs for ADAMTS3 Gene

This gene was present in the common ancestor of animals.

Orthologs for ADAMTS3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ADAMTS3 35
  • 99.5 (n)
  • 99.5 (a)
ADAMTS3 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ADAMTS3 35
  • 91.65 (n)
  • 93.59 (a)
ADAMTS3 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ADAMTS3 35
  • 89.59 (n)
  • 89.01 (a)
mouse
(Mus musculus)
Mammalia Adamts3 35
  • 85.05 (n)
  • 87.02 (a)
Adamts3 16
Adamts3 36
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ADAMTS3 36
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ADAMTS3 36
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Adamts3 35
  • 87.96 (n)
  • 92.84 (a)
chicken
(Gallus gallus)
Aves ADAMTS3 35
  • 77.3 (n)
  • 81.56 (a)
ADAMTS3 36
  • 83 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ADAMTS3 36
  • 76 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia adamts3 35
  • 73.57 (n)
  • 76.19 (a)
zebrafish
(Danio rerio)
Actinopterygii adamts3 36
  • 77 (a)
OneToOne
LOC568788 35
  • 71.97 (n)
  • 77.75 (a)
worm
(Caenorhabditis elegans)
Secernentea T19D2.1 37
  • 26 (a)
F08C6.1 37
  • 24 (a)
C37C3.6a 37
  • 34 (a)
C37C3.6b 37
  • 34 (a)
Species with no ortholog for ADAMTS3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ADAMTS3 Gene

ENSEMBL:
Gene Tree for ADAMTS3 (if available)
TreeFam:
Gene Tree for ADAMTS3 (if available)

Paralogs for ADAMTS3 Gene

Selected SIMAP similar genes for ADAMTS3 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ADAMTS3: view

Variants for ADAMTS3 Gene

Sequence variations from dbSNP and Humsavar for ADAMTS3 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs2682 -- 72,281,012(+) TACAA(A/C)AAACA utr-variant-3-prime
rs700512 -- 72,544,061(-) ATTTC(G/T)GAAAA intron-variant
rs700513 -- 72,543,951(-) CTGAC(A/G)AGTTT intron-variant
rs700514 -- 72,496,102(+) TTTCT(A/C)AGTTG intron-variant
rs736862 -- 72,285,386(+) TTTTT(G/T)AAAAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ADAMTS3 Gene

Variant ID Type Subtype PubMed ID
nsv829968 CNV Gain 17160897
nsv819500 CNV Loss 19587683
nsv879481 CNV Loss 21882294
esv2727811 CNV Deletion 23290073
esv2727812 CNV Deletion 23290073
dgv5633n71 CNV Loss 21882294
nsv879483 CNV Loss 21882294
esv2727813 CNV Deletion 23290073
esv2727814 CNV Deletion 23290073
esv2727815 CNV Deletion 23290073
esv2727816 CNV Deletion 23290073
esv2663516 CNV Deletion 23128226
esv1789836 CNV Insertion 17803354
esv1266268 CNV Insertion 17803354
dgv1643e1 CNV Complex 17122850
dgv1644e1 CNV Complex 17122850
esv1024654 CNV Insertion 17803354
nsv291650 CNV Insertion 16902084
nsv4385 CNV Loss 18451855
esv2727817 CNV Deletion 23290073
esv2079277 CNV Deletion 18987734
esv2727819 CNV Deletion 23290073
esv2727820 CNV Deletion 23290073
esv1992065 CNV Deletion 18987734
esv4638 CNV Deletion 18987735
esv996163 CNV Deletion 20482838
nsv289840 CNV Loss 16902084
esv1255200 CNV Deletion 17803354
esv2727821 CNV Deletion 23290073
esv22832 CNV Gain+Loss 19812545
esv2667909 CNV Deletion 23128226
nsv514226 CNV Loss 21397061
nsv441889 CNV CNV 18776908
dgv1645e1 CNV Complex 17122850
essv9286 CNV CNV 17122850
nsv829969 CNV Gain 17160897
nsv819816 CNV Gain 19587683

Relevant External Links for ADAMTS3 Gene

HapMap Linkage Disequilibrium report
ADAMTS3
Human Gene Mutation Database (HGMD)
ADAMTS3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ADAMTS3 Gene

Disorders for ADAMTS3 Gene

(1) University of Copenhagen DISEASES for ADAMTS3 Gene

Relevant External Links for ADAMTS3

Genetic Association Database (GAD)
ADAMTS3
Human Genome Epidemiology (HuGE) Navigator
ADAMTS3
genes like me logo Genes that share disorders with ADAMTS3: view

No data available for UniProtKB/Swiss-Prot for ADAMTS3 Gene

Publications for ADAMTS3 Gene

  1. Procollagen II amino propeptide processing by ADAMTS-3. Insights on dermatosparaxis. (PMID: 11408482) Fernandes R.J. … Apte S.S. (J. Biol. Chem. 2001) 3 4 23
  2. Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PMID: 9205841) Nagase T. … Ohara O. (DNA Res. 1997) 3 4
  3. ADAMTS: a novel family of proteases with an ADAM protease domain and thrombospondin 1 repeats. (PMID: 10094461) Tang B.L. … Hong W. (FEBS Lett. 1999) 2 3
  4. Genome-wide association study identifies multiple loci influencing human serum metabolite levels. (PMID: 22286219) Kettunen J. … Ripatti S. (Nat. Genet. 2012) 3 48
  5. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 3 48

Products for ADAMTS3 Gene

  • antibodies-online proteins for ADAMTS3
  • antibodies-online antibodies for ADAMTS3
  • antibodies-online kits for ADAMTS3

Sources for ADAMTS3 Gene

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