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ADAM8 Gene

protein-coding   GIFtS: 62

GC10M134964
ADAM metallopeptidase domain 8
(Previous name: a disintegrin and metalloproteinase domain 8 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases
CD156 1, 2, 5
EC 3.4.24.- 3
MGC134985 2
MS2 1, 2, 3
OTTHUMP00000020792 2
Descriptions
ADAM 8 3
ADAM metallopeptidase domain 8 2
CD156a antigen 2, 3
Cell surface antigen MS2 2, 3
a disintegrin and metalloproteinase domain 8 1, 2
External Ids
HGNC: 2151
Entrez Gene: 1012
UniProtKB: P783253
Ensembl: ENSG000001516517
Search outside databases for aliases for ADAM8 gene

Previous GC identifers: GC10M133990 GC10M134205 GC10M134992 GC10M134549

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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EntrezGene summary for ADAM8:
This gene encodes a member of the ADAM (a disintegrin and metalloprotease domain) family. Members
of this family are membrane-anchored proteins structurally related to snake venom disintegrins,
and have been implicated in a variety of biological processes involving cell-cell and cell-matrix
interactions, including fertilization, muscle development, and neurogenesis. The protein encoded
by this gene may be involved in cell adhesion during neurodegeneration. [provided by RefSeq]

UniProtKB/Swiss-Prot: ADAM8_HUMAN, P78325
Function: Possible involvement in extravasation of leukocytes

Gene Wiki entry for ADAM8

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the ADAM8 gene  

Entrez Gene cytogenetic band: 10q26.3   Ensembl cytogenetic band:  10q26.3   HGNC cytogenetic band: 10q26.3

ADAM8 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M134964:     (about GC identifiers)

Start:
134,925,911 bp from pter
End:
134,940,362 bp from pter
Size:
14,452 bases
Orientation:
minus strand
RefSeq DNA sequence:
NC_000010.9  NT_017795.18  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: ADAM8_HUMAN, P78325 (See protein sequence)
Recommended Name: Disintegrin and metalloproteinase domain-containing protein 8 precursor  
Size: 824 amino acids; 88673 Da
Cofactor: Binds 1 zinc ion per subunit (Probable)
Subcellular location: Membrane; Single-pass type I membrane protein

REFSEQ proteins: NP_001100.2  

ENSEMBL proteins: 
ENSP00000357554 


Human Recombinant Proteins 
Browse Drug Discovery Central at Invitrogen for human recombinant proteins
Browse Purified and Recombinant Proteins at Millipore
Browse Human Recombinant Proteins at Sigma-Aldrich  
R&D Systems Recombinant & Natural Proteins for ADAM8
Browse recombinant and purified proteins available from Enzo Life Sciences
Recombinant Proteins from Abcam (ADAM8)
Browse Abnova for Human Recombinant Proteins
                Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0005886 plasma membrane IEA--
GO:0005887 integral to plasma membrane TAS9126482
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Antibodies for ADAM8: 
Browse Antibodies Central at Invitrogen
Millipore Mono- and Polyclonal Antibodies for the study of ADAM8
Sigma-Aldrich Antibodies for ADAM8
R&D Systems Antibodies for ADAM8
Antibodies from Abcam (ADAM8), each with their AbpromiseSM
Monoclonal and Polyclonal Antibodies from Abnova (ADAM8)
Novus Biologicals Antibodies for ADAM8

Assays for ADAM8: 
Browse Invitrogen for biochemical assays
Browse Kits and Assays available from Millipore
R&D Systems ELISAs for ADAM8         (see all)
Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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5/10 InterPro domains/families (see all 10 ):
 IPR018358 Disintegrin_CS
 IPR006586 ADAM_Cys-rich
 IPR001762 Blood-coag_inhib_Disintegrin
 IPR000742 EGF_3
 IPR001590 Peptidase_M12B


   GeneDecks  ADAM8 for the domains selected above  
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Graphical View of Domain Structure for InterPro Entry P78325

ProtoNet protein and cluster: P78325

3 Blocks protein families:
IPB001762 Disintegrin
IPB002870 Metalloendopeptidase M12B
IPB006210 Type I EGF


UniProtKB/Swiss-Prot: ADAM8_HUMAN, P78325
Similarity: Contains 1 disintegrin domain
Similarity: Contains 1 EGF-like domain
Similarity: Contains 1 peptidase M12B domain

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADAM8)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (ADAM8)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001109

              Applied Biosystems Silencer® siRNAs for ADAM8

              Sigma-Aldrich siRNA and siRNA Panels for ADAM8  
                     Sigma-Aldrich shRNA Panels and shRNA for ADAM8  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Clones:Browse Clone Ranger at Invitrogen for clones
Browse Clones for the Expression of Recombinant Proteins Available from Millipore
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001109
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001109
                                 untagged cDNA clone in CMV expression vector: NM_001109 

Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
              OriGene genome-wide validated SYBR primer pairs: NM_001109

UniProtKB/Swiss-Prot: ADAM8_HUMAN, P78325
Function: Possible involvement in extravasation of leukocytes
Enzyme Number (IUBMB): EC 3.4.24.- 

Genatlas biochemistry entry for ADAM8:
a disintegrin and metalloprotease (active) domain 8,membrane anchored cell surface adhesion protein
(antigen MS2),expressed in granulocyte,monocyte,macrophage,involved in cell-cell and cell-matrix
interactions

1 MGI mutant phenotype (inferred from 1 allele(MGI details for Adam8):

normal

4 Gene Ontology (GO) molecular function terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0004222 metalloendopeptidase activity IEA--
GO:0008233 peptidase activity IEA--
GO:0008270 zinc ion binding IEA--
GO:0046872 metal ion binding IEA--
About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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1 Millipore Pathway for ADAM8
 Metalloproteases in connective tissue degradation

   GeneDecks  ADAM8 for the pathways selected above  
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1 Sigma-Aldrich "Your Favorite Gene" Pathway for  ADAM8  (Your Favorite Gene powered by Ingenuity) 
 Axonal Guidance Signaling

   GeneDecks  ADAM8 for the pathways selected above  
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  --

2 Gene Ontology (GO) biological process terms (links to tree view):

GO IDQualified GO termEvidencePubMed IDs
GO:0006508 proteolysis IEA--
GO:0016337 cell-cell adhesion IEA--
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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Enzo Life Sciences drugs & compounds for ADAM8
Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for ADAM8
1 Novoseek chemical compound relationship for ADAM8 gene
Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
allergens 34.94 4 18691140 (1), 17270707 (1), 17339047 (1)
About this table


(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib.
RNA:
Invitrogen RNAi Products for gene knock-down (ADAM8)
Browse for Gene Knock-down Tools from Millipore
Abnova Chimera RNAi Products for Gene knock-down (ADAM8)
              OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001109

              Sigma-Aldrich siRNA and siRNA Panels for ADAM8  
                     Sigma-Aldrich shRNA Panels and shRNA for ADAM8  
                     Explore Sigma-Aldrich super-pooled esiRNAs  

Applied Biosystems Silencer® siRNAs: 

NM_001109  

REFSEQ mRNAs for ADAM8 gene: 

NM_001109.3   

Applied Biosystems TaqMan ® Gene Expression Assays: 

NM_001109  

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001109
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_001109
                                 untagged cDNA clone in CMV expression vector: NM_001109 

Additional cDNA sequence: 

AK301147.1 AK304324.1 AK310662.1 AK312834.1 BC064500.1 BC115404.1 D26579.1 

5 DOTS entries:

DT.211684  DT.101968108  DT.91662946  DT.95107243  DT.102824678 

24/77 AceView cDNA sequences (see all 77 ):

AW450964 BQ582246 BF513621 AI686614 AA279188 BU579727 BM894152 AW296645 
BQ007791 BM875345 BQ687228 AI479652 AI814527 D26579 BF062736 NM_001109 
AI240862 BM146234 BU542259 BM850301 AW770687 AA865449 BQ708311 BF512208 

highest scoring ESTs for ADAM8:

D26579 BC064500 BE243136 BI768819 BI907784 BM146234 BM146278 BM146783 BM837639 BQ689657 

Unigene Cluster for ADAM8:

ADAM metallopeptidase domain 8
Hs.501574  [show with all ESTs]
Unigene Representative Sequence: NM_001109


GeneLoc Exon Structure

5/8 Alternative Splicing Database (ASD) splice patterns (SP) for ADAM8 (see all 8 )

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c · 6d ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16a · 16b ^ 17 ^
SP1:                                                                                                                                                            
SP2:                                                                                                                                                            
SP3:                          -     -     -                                                                                                                     
SP4:                                                        -                                                                                                   
SP5:                    -     -                                                                                                                                 

ExUns: 18 ^ 19 ^ 20a · 20b ^ 21 ^ 22a · 22b ^ 23a · 23b · 23c
SP1:                                -                           
SP2:        -     -                 -                           
SP3:                                                            
SP4:                                                            
SP5:                                                            

About this scheme

ECgene alternative splicing isoforms for ADAM8

1 Ensembl transcript including schematic representation:
ENST00000368566  
(Experimental results according to 1GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
About This Section

ADAM8 expression in normal and diseased human tissues

 Applied Biosystems TaqMan ® Gene Expression Assays for ADAM8

1 / 2 / 3

5 probe-sets matching ADAM8 gene


Affymetrix
probe-set
Array  GeneAnnot data GeneNote data GeneTide data
# genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
40712_at2, 3 U95-A 1 1.00 1.00 1.00 1.00 D26579 1.00 1.00 1.00 1

205180_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001109 0.60 1.00 0.82 1

205179_s_at2, 3 U133-A 1 1.00 1.00 -- -- AI814527 0.60 1.00 0.82 1

205180_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

205179_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
GeneDecks  ADAM8 for binary patterns associated with the probe-sets selected above  
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Data from (Publications) and GNF BioGPS
    About these images
About these images

CGAP SAGE TAG: GGATTCAAGA

SOURCE GeneReport for Unigene cluster: Hs.501574

Expression variation in blood from EXPOLDB for ADAM8

UniProtKB/Swiss-Prot: ADAM8_HUMAN, P78325
Tissue specificity: Expressed on neutrophils and monocytes

(Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
About This Section


Orthologs for ADAM8 gene from 5/7 species (see all 7 )
Organism Gene Locus Description Human
Similarity
NCBI accessions
dog
(Canis familiaris)
ADAM81   -- ADAM metallopeptidase domain 8 74.52(n)
64.54(a)
491699  XM_548820.2  XP_548820.2 
cow
(Bos taurus)
ADAM81   -- ADAM metallopeptidase domain 8 75.9(n)
67.24(a)
519652  XM_597877.3  XP_597877.3 
rat
(Rattus norvegicus)
Adam81   -- ADAM metallopeptidase domain 8 72.91(n)
66.27(a)
499285  XM_574584.2  XP_574584.2 
mouse
(Mus musculus)
Adam81, 5 75
a disintegrin and metallopeptidase domain 81, 5 72.42(n)1
65.08(a)1
115011  NM_007403.21  NP_031429.11 
 AK0890865  AK0891695  (see all 21)
chicken
(Gallus gallus)
ADAM81   -- ADAM metallopeptidase domain 8 56.69(n)
47.45(a)
423672  XM_421552.2  XP_421552.2 
About this table        Species with no ortholog for ADAM8

ENSEMBL Gene Tree for ADAM8
(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section

Paralogs for ADAM8 gene
ADAM72  ADAMDEC12  ADAM282  

(According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section


10/129 NCBI SNPs in ADAM8 are shown (see all 129 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 85)
ABGenomic DataTranscription DataAllele Frequencies
SNP IDValidChr 10 posSequenceRecsAA
Chg
TypeMoreRecsAllele
freq
PopTotal
sample
More
------------
rs15730411,2
A,C,F,H,O134941792(+) GCCGAC/TGCTGA 1 -- ng314Minor allele frequency- T:0.22EU EA WA 418
rs22757201,2
A,C,F,H134932336(-) CCGTCC/TTCGTG 1 F/L mis17Minor allele frequency- T:0.13EA WA 2050
rs29953001,2
A,C,F,H134926514(+) GCATTA/CCTGAG 1 -- ut31 ese35Minor allele frequency- C:0.12EU EA WA 1904
rs22757181,2
A,C,F134942231(+) CTCGGC/TGGTGC 1 -- ng311Minor allele frequency- T:0.02EA 1494
rs22757251,2
C,F,H134939025(+) ACGCCG/ACGGCA 1 R/W mis1 ese39Minor allele frequency- A:0.31EA EU WA 1746
rs111016761,2
A,C134941230(+) GGGGGC/GCCTCA 1 -- ng31 tfbs3 trp30--------
rs10058051,2
A,F134942090(-) CGGACC/TGGTGA 1 -- ng314Minor allele frequency- A:0.05EA NA 160
--
rs30083271,2
A,C134941386(+) GGCCGC/GGGCCT 1 -- ng310--------
rs10058061,2
A134941971(-) GGTGAC/TAGGAG 1 -- ng310--------
--
rs32160401,2
C134942273(+) CCACA-/ACCCTT 1 -- ng310--------
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HapMap Linkage Disequilibrium images for ADAM8 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

OMIM: 602267

9 Novoseek disease relationships for ADAM8 gene

Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
preterm delivery 31.82 6 16638589 (5)
asthma 26.81 22 19397475 (6), 17339047 (4), 18691140 (3), 17088949 (1) (see all 5)
inflammation 24.79 10 17308171 (2), 16542157 (2), 18691140 (1), 12966612 (1) (see all 6)
neurodegeneration 24.51 7 11050116 (3), 16542157 (2)
tumors 10.22 9 16772875 (3), 15538223 (1), 11050116 (1), 18710625 (1) (see all 5)
necrosis 8.16 1 11050116 (1)
cancer lung 4.01 8 15623614 (7)
cancer 3.80 1 17355265 (1)
metastasis 0.00 3 15538223 (1), 18710625 (1), 14719095 (1)
About this table

Human Genome Epidemiology Navigator: ADAM8 (1 document)

(Possibly Related Articles in Doctor's Guide)
About This Section

  --

(in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
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10/36 PubMed articles for ADAM8 gene (see all 36 ):
(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

 ANDOR
Aliases
Free Text  

  Query String
PubMed
OMIM
NCBI Bookshelf
  (Note: In FireFox, select the above section and copy using Ctrl-C)
(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
About This Section

Entrez Gene: 101 HGNC: 215 AceView: ADAM8 Ensembl:ENSG00000151651 euGenes: HUgn101
ECgene: ADAM8 H-InvDB: ADAM8
(According to HUGE)
About This Section

  --
(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

  --
(Available from WIS Yeda, Salk, Tufts)
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  --
(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section



Products for ADAM8:
 TaqMan ® Gene Expression Assays
 TaqMan ® Genotyping Assays
  Free SNP selection tool



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