ADAM33 Gene
protein-coding GIFtS : 65
GC20M003596
ADAM metallopeptidase domain 33 (Previous names: a disintegrin and metalloproteinase domain 33, chromosome 20 open reading frame 153 )Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database (Previous symbol: C20orf153 )
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Aliases & Descriptions for ADAM33
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases C20orf153 2 DJ964F7.1 2 DKFZp434K0521 1 , 2 EC 3.4.24.- 3 FLJ35308 2 FLJ36751 2 MGC149823 2 MGC71889 2 OTTHUMP00000030126 2 dJ964F7.1 1
Descriptions ADAM 33 3 ADAM metallopeptidase domain 33 2 a disintegrin and metalloprotease 33 2 a disintegrin and metalloproteinase domain 33 1 , 2 chromosome 20 open reading frame 153 1 disintegrin and reprolysin metalloproteinase family protein 2
Search outside databases for aliases for ADAM33 genePrevious GC identifers: GC20M003637 GC20M003643
Summaries for ADAM33 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ADAM33 : This gene encodes a member of the ADAM (a disintegrin and metalloprotease domain) family. Membersof this family are membrane-anchored proteins structurally related to snake venom disintegrins,and have been implicated in a variety of biological processes involving cell-cell and cell-matrixinteractions, including fertilization, muscle development, and neurogenesis. This protein is atype I transmembrane protein implicated in asthma and bronchial hyperresponsiveness. Alternativesplicing of this gene results in two transcript variants encoding different isoforms. [provided byRefSeq] Gene Wiki entry for ADAM33
Genomic Location for ADAM33
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ADAM33 gene Entrez Gene cytogenetic band: 20p13 Ensembl cytogenetic band: 20p13 HGNC cytogenetic band: 20p13 ADAM33 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure
GeneLoc location for GC20M003596:
(about GC identifiers )
Start:
3,596,617 bp from pter
End:
3,610,893 bp from pter
Size:
14,277 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000020.9 NT_011387.8 Proteins for ADAM33
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 (See
protein sequence )Recommended Name: Disintegrin and metalloproteinase domain-containing protein 33 precursor Size : 813 amino acids; 87739 Da
Cofactor : Binds 1 zinc ion per subunit (By similarity)
Subcellular location : Membrane; Single-pass type I membrane protein
PDB structure from and Proteopedia : 1R54 (3D)
 1R55 (3D)
 
Secondary accessions : A0A1K6 Q5JT75 Q5JT76 Q8N0W6Alternative splicing : 3 isoforms : Q9BZ11-1 Q9BZ11-2 Q9BZ11-3
Post-translational modifications:
The precursor is cleaved by a furin endopeptidase (By similarity)1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_079496.1 NP_694882.1 ENSEMBL proteins: ENSP00000318839 ENSP00000369190 ENSP00000350730 ENSP00000353845 ENSP00000348912 ENSP00000322550 ENSP00000340571 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ADAM33: Assays for ADAM33:
Protein
Domains/ Families for ADAM33(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9BZ11 ProtoNet protein and cluster: Q9BZ11
3 Blocks protein families : IPB001762 Disintegrin IPB002870 Metalloendopeptidase M12B IPB006586 ADAM UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 Domain : The conserved cysteine present in the cysteine-switch motif binds the catalytic zinc ion,thus inhibiting the enzyme. The dissociation of the cysteine from the zinc ion upon theactivation-peptide release activates the enzyme Similarity : Contains 1 disintegrin domainSimilarity : Contains 1 EGF-like domainSimilarity : Contains 1 peptidase M12B domain
Gene Function for ADAM33
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_153202 Applied Biosystems Silencer ® siRNAs for ADAM33 Sigma-Aldrich siRNA and siRNA Panels for ADAM33 Sigma-Aldrich shRNA for ADAM33 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_025220                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_025220                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_025220  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_025220
2 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Adam33) :4 Gene Ontology (GO) molecular function terms (links to tree view) :
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Pathways & Interactions for ADAM33
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Gene Network CentralTM Interacting Genes and Proteins Network for ADAM33 5/8 Interacting proteins for ADAM33 (ENSP00000348912 3 Q9BZ11 2 ) via UniProtKB, MINT, and/or STRING (see all 8
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
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Drugs & Compounds for ADAM33 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for ADAM33
Browse Tocris compounds for ADAM33
Transcripts for ADAM33(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_153202 Sigma-Aldrich siRNA and siRNA Panels for ADAM33 Sigma-Aldrich shRNA for ADAM33 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_025220 NM_153202
REFSEQ mRNAs for ADAM33 gene (2 alternative transcripts): NM_025220.2 NM_153202.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_025220 NM_153202
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_025220                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_025220                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_025220  
Additional cDNA sequence: AB055891.1 AF466287.1 AF466289.1 AK092627.1 AK095953.1 AK123015.1 AK126487.1 AK126498.1 AK226148.1 AK300429.1 AK304037.1 AY223850.1 AY223851.1 AY223852.1 AY223853.1 AY223854.1 AY223855.1 AY358314.1 BC062663.1 BC125112.1 BC125113.1
17 DOTS entries : DT.101984427 DT.97794136 DT.100665070 DT.100777324 DT.434730 DT.95227190 DT.120839396 DT.100022366 DT.120839384 DT.120839395 DT.100022367 DT.120839388 DT.120839376 DT.434823 DT.120839391 DT.120839397 DT.120839401
24/74 AceView cDNA sequences (see all 74
):NM_025220 AW131070 AI537771 CD632594 AY223852 BM510563 AW594247 AY223853 AY223851 AB055891 AF466289 BU150601 NM_153202 BU783941 CD632564 CD632575 AI370810 AF466287 AY223854 T83640 CD632591 BV196131 BC062663 BQ694108
highest scoring ESTs for ADAM33 :AB055891 AF466287 AF466289 AK095953 AK123015 AK126487 AK126498 AY358314 CD632573 AA197050
Unigene Cluster for ADAM33: ADAM metallopeptidase domain 33 Hs.173716 [show with all ESTs ] Unigene Representative Sequence: AK226148 GeneLoc Exon Structure 5/19 Alternative Splicing Database (ASD) splice patterns (SP) for ADAM33 (see all 19
) ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · SP1 :             -       -       -   -                         -   SP2 :             -       -       -   -                         -   SP3 :                                                     SP4 :             -       -                                   SP5 :             -       -         -       -   -   -       -   -   -   -   -  
ExUns: 14b ^ 15 ^ 16a · 16b ^ 17 ^ 18a · 18b · 18c ^ 19 ^ 20 ^ 21a · 21b ^ 22a · 22b · 22c ^ 23 ^ 24a · 24b · 24c · 24d SP1 :     -                   -   -   -               SP2 :     -                   -   -   -               SP3 :     -                   -   -   -               SP4 :     -       -             -   -   -               SP5 : -   -   -   -   -                 -                
About this scheme ECgene alternative splicing isoforms for ADAM33 7 Ensembl transcripts including schematic representations : ENST00000322570
ENST00000379861
ENST00000358035
ENST00000360630
ENST00000356518
ENST00000350009
ENST00000339622
Expression for ADAM33
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ADAM33 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ADAM33 1 / 2 / 3
5 probe-sets matching ADAM33 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: ACTGCTGGCCSOURCE GeneReport for Unigene cluster: Hs.173716 UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11 Tissue specificity : Expressed in all tissues, except liver, with high expression in placenta, lung,spleen and veins
Orthologs for ADAM33
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ADAM33 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for ADAM33 ENSEMBL Gene Tree for ADAM33 Paralogs for ADAM33 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ADAM33 gene ADAM19 2 ADAM12 2 ADAM15 2
SNPs/Variants for ADAM33 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ADAM33 (up to first 250kb)
Disorders & Mutations for ADAM33
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 607114 UniProtKB/Swiss-Prot: ADA33_HUMAN, Q9BZ11
Defects in ADAM33 may be a cause of susceptibility to asthma
6 Novoseek disease relationships for ADAM33 gene
About this table 1 PharmGKB disease relationship for ADAM33 gene
Disease
PharmGKB Relations
PubMed IDs for articles supporting these relationships
Asthma GN  12958057
About this table Genetic Association Database: ADAM33 Human Genome Epidemiology Navigator: ADAM33 (35 documents)
Medical News for ADAM33 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ADAM33 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/71 PubMed articles for ADAM33 gene (see all 71
): Association of the ADAM33 gene with asthma and bronchial hyperresponsiveness. (PubMed id 12110844) 1, 3, 4, 6 Van Eerdewegh P.... Keith T.P. (2002) Identification and characterization of novel mouse and human ADAM33s with potential metalloprotease activity. (PubMed id 11814695) 2, 3, 4 Yoshinaka T.... Higashiyama S. (2002) ADAM33 polymorphism: association with bronchial hyper-responsiveness in Korean asthmatics. (PubMed id 15196271) 1, 3, 6 Lee J.H....Shin H.D. (2004) Asthma is associated with single-nucleotide polymorphisms in ADAM33. (PubMed id 14720258) 1, 3, 6 Werner M....Wjst M. (2004) Association of a disintegrin and metalloprotease 33 (ADAM33) gene with asthma in ethnically diverse populations. (PubMed id 14564349) 1, 3, 6 Howard T.D....Meyers D.A. (2003) Polymorphisms in a disintegrin and metalloprotease 33 (ADAM33) predict impaired early-life lung function. (PubMed id 15805180) 1, 3, 6 Simpson A....John S.L. (2005) A disintegrin and metalloprotease 33 polymorphisms and lung function decline in the general population. (PubMed id 15879414) 1, 3, 6 van Diemen C.C....Boezen H.M. (2005) Asthma severity and genetics in Taiwan. (PubMed id 15986064) 1, 3, 6 Huang J.L. (2005) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 3, 4 Olsen J.V....Mann M. (2006) Contribution of ADAM33 polymorphisms to the population risk of asthma. (PubMed id 15790980) 3, 6 Blakey J....Hall I.P. (2005)
Search for ADAM33
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Genome Databases showing ADAM33
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ADAM33
(According to HUGE )
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Specialized Databases showing ADAM33 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Name Description
NIEHS-SNPs http://egp.gs.washington.edu/data/adam33/
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-- Services for ADAM33 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ADAM33:
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