Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ACY1 Gene

protein-coding   GIFtS: 64
GCID: GC03P052017

aminoacylase 1

 Explore 16 diseases affiliated with
ACY1 via our new
 Human Malady Compendium 
Biological research products
for ACY1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA

Quality score for the ORGUL clustered with this gene is 3

Aliases
Aminoacylase 11 2     ACY1D2 5
ACY-12 3     Acylase1
N-Acyl-L-Amino-Acid Amidohydrolase2 3     Aminoacylase-11
EC 3.5.1.143 8     EC 3.5.18

External Ids:    HGNC: 1771   Entrez Gene: 952   Ensembl: ENSG000002439897   OMIM: 1046205   UniProtKB: Q031543   
ORGUL members:         
NONCODE:n410328    

Export aliases for ACY1 gene to outside databases

Previous GC identifers: GC03P051110 GC03P051270 GC03P051873 GC03P051976 GC03P051992 GC03P052009


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ACY1:
This gene encodes a cytosolic, homodimeric, zinc-binding enzyme that catalyzes the hydrolysis of acylated L-amino acids
to L-amino acids and an acyl group, and has been postulated to function in the catabolism and salvage of acylated
amino acids. This gene is located on chromosome 3p21.1, a region reduced to homozygosity in small-cell lung cancer
(SCLC), and its expression has been reported to be reduced or undetectable in SCLC cell lines and tumors. The amino
acid sequence of human aminoacylase-1 is highly homologous to the porcine counterpart, and this enzyme is the first
member of a new family of zinc-binding enzymes. Mutations in this gene cause aminoacylase-1 deficiency, a metabolic
disorder characterized by central nervous system defects and increased urinary excretion of N-acetylated amino acids.
Alternative splicing of this gene results in multiple transcript variants. Read-through transcription also exists
between this gene and the upstream ABHD14A (abhydrolase domain containing 14A) gene, as represented in
GeneID:100526760. A related pseudogene has been identified on chromosome 18. (provided by RefSeq, Nov 2010)

UniProtKB/Swiss-Prot: ACY1_HUMAN, Q03154
Function: Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate)

Gene Wiki entry for ACY1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_022517.18  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ACY1 gene promoter:
         PPAR-alpha   MZF-1   MIF-1   HNF-4alpha2   HNF-4alpha1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidACY1 promoter sequence
   Search SABiosciences Chromatin IP Primers for ACY1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ACY1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3p21.1   Ensembl cytogenetic band:  3p21.2   HGNC cytogenetic band: 3p21.2

ACY1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ACY1 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P052017:  view genomic region     (about GC identifiers)

Start:
52,009,066 bp from pter      End:
52,023,218 bp from pter
Size:
14,153 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ACY1_HUMAN, Q03154 (See protein sequence)
Recommended Name: Aminoacylase-1  
Size: 408 amino acids; 45885 Da
Cofactor: Binds 2 zinc ions per subunit
Subunit: Homodimer. Interacts with SPHK1 (By similarity)
Subcellular location: Cytoplasm
1 PDB 3D structure from and Proteopedia for ACY1:
1Q7L (3D)    

Explore the universe of human proteins at neXtProt for ACY1: NX_Q03154

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q03154

  • 4/12 DME Specific Peptides for ACY1 (Q03154) (see all 12)
     PGHASRF  RYIRAVG  PWWAAFS  RGAQDMK 

    ACY1 Protein expression data from MOPED and PaxDb:    About this image 
    ACY1 Protein Expression
    REFSEQ proteins (5 alternative transcripts): 
    NP_000657.1  NP_001185824.1  NP_001185825.1  NP_001185826.1  NP_001185827.1  

    ENSEMBL proteins: 
     ENSP00000418683   ENSP00000419262   ENSP00000417056   ENSP00000417618   ENSP00000384296  
     ENSP00000419830   ENSP00000390557  

    Human Recombinant Protein Products for ACY1: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    R&D Systems Recombinant & Natural Proteins for ACY1 (Aminoacylase/ACY1)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: ACY1
    OriGene Protein Over-expression Lysate (see all 4): ACY1
    OriGene Custom Protein Services for ACY1 
    GenScript Custom Purified and Recombinant Proteins Services for ACY1
    Novus Biologicals ACY1 Proteins
    Novus Biologicals ACY1 Lysates
    Sino Biological Recombinant Protein for ACY1
    ProSpec Recombinant Protein for ACY1
    Uscn Proteins for ACY1

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005737cytoplasm ----
    GO:0005829cytosol TAS8394326

    ACY1 for ontologies           About GeneDecksing



    ACY1 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    R&D Systems Antibodies for ACY1 (Aminoacylase/ACY1)
    OriGene Antibodies (see all 15): ACY1
    OriGene Custom Antibody Services for ACY1 
    GenScript Custom Superior Antibodies Services for ACY1
    Novus Biologicals ACY1 Antibodies
    Abcam antibodies for ACY1 
    Uscn Antibodies for ACY1
    ThermoFisher Antibodies for ACY1

    Assay Products for ACY1: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for ACY1
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for ACY1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    ACY1 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR011650 Peptidase_M20_dimer
     IPR001261 ArgE/DapE_CS
     IPR002933 Peptidase_M20
     IPR010159 N-acyl_aa_amidohydrolase

    Graphical View of Domain Structure for InterPro Entry Q03154

    ProtoNet protein and cluster: Q03154

    1 Blocks protein family: IPB011650 Peptidase dimerisation

    UniProtKB/Swiss-Prot: ACY1_HUMAN, Q03154
    Similarity: Belongs to the peptidase M20A family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ACY1_HUMAN, Q03154
    Function: Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate)
    Catalytic activity: An N-acyl-L-amino acid + H(2)O = a carboxylate + an L-amino acid

         Genatlas biochemistry entry for ACY1:
    aminoacylase 1

         Enzyme Numbers (IUBMB): EC 3.5.1.141 2 EC 3.5.12

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004046aminoacylase activity IEA--
    GO:0008237metallopeptidase activity IEA--
    GO:0046872metal ion binding IEA--
         
    ACY1 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for ACY1:
     Upregulation of Wnt/beta-caten 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for ACY1 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: ACY1
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ACY1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate ACY1
    SwitchGear 3'UTR luciferase reporter plasmidACY1 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ACY1 (see all 7)
    OriGene shRNA RFP: ACY1
    OriGene siRNA: ACY1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ACY1
    Sirion Biotech Custom design and validation of potent shRNA sequences against ACY1 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for ACY1
    Sirion Biotech Customized adenovirus for overexpression of ACY1 
    Sirion Biotech Customized adenovirus for potent knockdown of ACY1

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1 (see all 6)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 5): ACY1 (NM_001198895)
    Sino Biological Human cDNA Clone for ACY1
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ACY1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ACY1 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for ACY1
    Search LifeMap BioReagents cell lines for ACY1
    Sirion Biotech Customized stable knockdown cell line services for ACY1 
    Sirion Biotech Customized inducible knockdown cell line services for ACY1
    Sirion Biotech Customized stable overexpressing cell line services for ACY1
    Sirion Biotech Customized inducible overexpressing cell line services for ACY1

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACY1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Arginine and proline metabolism
    Arginine and proline metabolism1.00
    Urea cycle and metabolism of amino groups0.36
    2Metabolism
    Metabolic pathways0.38

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for ACY1 
        Urea cycle and metabolism of amino groups


    2         Kegg Pathways  (Kegg details for ACY1):
        Arginine and proline metabolism
    Metabolic pathways


    ACY1 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ACY1

    5/6 Interacting proteins for ACY1 (Q031542, 3) via UniProtKB, MINT, STRING, and/or I2D (see all 6)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TTC1Q996142, 3MINT-66237 I2D: score=5 
    BBS2Q9BXC93I2D: score=1 
    BBS4Q96RK43I2D: score=1 
    BBS7Q8IWZ63I2D: score=1 
    NIF3L1Q9GZT83I2D: score=1 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006508proteolysis IEA--
    GO:0006520cellular amino acid metabolic process IEA--

    ACY1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    ACY1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ACY1

    10/14 HMDB Compounds for ACY1 (see all 14)    About this table
    CompoundSynonyms CAS #PubMed Ids
    Acetic acidAcetate (see all 12)64-19-7--
    Arachidic acidArachate (see all 10)506-30-9--
    Arachidonic acid5,8,11,14-Eicosatetraenoic acid (see all 16)506-32-1--
    Heptadecanoic acidHeptadecanoate (see all 16)506-12-7--
    Heptadecanoyl CoAHeptadecanoyl coenzyme A (see all 19)3546-17-6--
    Myristic acid1-Tridecanecarboxylate (see all 15)544-63-8--
    N-AcetylglutamineN2-Acetyl-L-glutamine (see all 9)2490-97-3--
    N-Acetylornithine(2S)-2-acetamido-5-aminopentanoic acid (see all 5)----
    Ornithine(+)-S-Ornithine (see all 9)70-26-8--
    Palmitic acidHexaectylic acid (see all 45)57-10-3--

    1 DrugBank Compound for ACY1    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    L-Aspartic Acid(+)-Aspartic acid (see all 23)56-84-8target--17139284 17016423 1284246

    10 Novoseek chemical compound relationships for ACY1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    glutaryl-7-aminocephalosporanic acid 93.9 17 15221226 (2), 8031081 (1), 11910763 (1), 9721298 (1) (see all 6)
    7-aminocephalosporanic acid 88.9 7 11910763 (1), 10991936 (1), 12665670 (1)
    cephalosporin c 86.7 5 1776668 (1), 15358003 (1)
    n-acetylornithine 78.8 1 10965943 (1)
    cephalosporin 51 1 16276875 (1)
    beta-lactam 41.9 3 16495538 (1), 15358003 (1)
    penicillin 37.4 3 12827318 (1), 15358003 (1), 16276875 (1)
    n acetylcysteine 36.1 8 10820133 (2), 16950796 (1), 11848284 (1)
    polyacrylamide 18.1 1 9688818 (1)
    fatty acid 0 1 16495538 (1)

    Search CenterWatch for drugs/clinical trials and news about ACY1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ACY1 gene (5 alternative transcripts): 
    NM_000666.2  NM_001198895.1  NM_001198896.1  NM_001198897.1  NM_001198898.1  

    Unigene Cluster for ACY1:

    Aminoacylase 1
    Hs.334707  [show with all ESTs]
    Unigene Representative Sequence: NR_037192
    12 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000496679 ENST00000491318 ENST00000476854(uc021wzd.1) ENST00000476351(uc021wzb.1)
    ENST00000494103(uc021wzc.1) ENST00000404366(uc003dcp.3 uc003dcq.3)
    ENST00000465121(uc011beb.2) ENST00000469863 ENST00000468068 ENST00000464587
    ENST00000490244 ENST00000458031

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: ACY1
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ACY1
    Search QIAGEN for miScript miRNA Assays for microRNAs that regulate ACY1
    SwitchGear 3'UTR luciferase reporter plasmidACY1 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ACY1 (see all 7)
    OriGene shRNA RFP: ACY1
    OriGene siRNA: ACY1
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ACY1
    Sirion Biotech Custom design and validation of potent shRNA sequences against ACY1 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1 (see all 6)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1 (see all 2)
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 5): ACY1 (NM_001198895)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ACY1
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ACY1 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ACY1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ACY1
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ACY1
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ACY1

    Additional cDNA sequence: 

    AK298274.1 BC000545.2 BC003023.1 BC014112.2 D14524.1 D16307.1 L07548.1 NR_037192.1 

    24/26 DOTS entries (see all 26):

    DT.100661294  DT.97862503  DT.450006  DT.100031645  DT.91756768  DT.120854083  DT.95204252  DT.101984978 
    DT.100885776  DT.86846444  DT.95204319  DT.91941554  DT.95204270  DT.100885779  DT.100707975  DT.100885796 
    DT.100885797  DT.120854139  DT.120854266  DT.91915382  DT.100685918  DT.120854112  DT.120854150  DT.216645 

    24/446 AceView cDNA sequences (see all 446):

    L07548 BU501085 CA455065 CR607052 BM832229 BU159714 BM727126 CA446152 
    BE168010 BX101201 BM923786 BM925157 BC003023 BM673744 CB125500 CA308876 
    BU742163 BE296669 AW299786 BC002571 BQ934069 CD014025 NM_000666 CB161164 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ACY1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --
    ACY1 Expression
    About this image

    ACY1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Skeletal MuscleHyoid Arch MusclesMyoblastsSkeletal Muscle
    Skeletal MuscleMandibular Arch MusclesMyoblastsSkeletal Muscle
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See ACY1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ACY1

    SOURCE GeneReport for Unigene cluster: Hs.334707

    UniProtKB/Swiss-Prot: ACY1_HUMAN, Q03154
    Tissue specificity: Expression is highest in kidney, strong in brain and weaker in placenta and spleen

        SABiosciences Expression via Pathway-Focused PCR Array including ACY1: 
              Amino Acid Metabolism I in human mouse rat

    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ACY1
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat ACY1
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ACY1
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ACY1
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACY1

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for ACY1 gene from 8/27 species (see all 27)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves LOC1008588361 aminoacylase-1-like 71.85(n)
    69.92(a)
      100858836  XM_003641985.1  XP_003642033.1 
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    66(a)
    1 → many
    2(153097055-153119597)
    African clawed frog
    (Xenopus laevis)
    Amphibia MGC686402 hypothetical protein MGC68640 76.33(n)    BC061653.1 
    zebrafish
    (Danio rerio)
    Actinopterygii zgc556052 similar to aminoacylase 1 75.15(n)   393970  BC045399.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG64653 aminoacylase 49(a)
    (best of 6)
      86C4   --
    worm
    (Caenorhabditis elegans)
    Secernentea C10C5.33
    C06A6.41
    aminoacylase-13
    Protein C06A6.41
    47(a)
    (best of 4)3
    51.87(n)1
    48.47(a)1
      IV(9375035-9376602)3
    1775711  NM_001026130.41  NP_001021301.11 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT1G441801 aminoacylase 48.99(n)
    41.92(a)
      841021  NM_103542.1  NP_175082.1 
    rice
    (Oryza sativa)
    Liliopsida Os06g02102001 hypothetical protein 51.91(n)
    44.78(a)
      4340457  NM_001063648.1  NP_001057113.1 


    ENSEMBL Gene Tree for ACY1 (if available)
    TreeFam Gene Tree for ACY1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ACY1 gene
    PM20D12  ABHD14A-ACY12  
    1 SIMAP similar gene for ACY1 using alignment to 7 protein entries:     ACY1_HUMAN (see all proteins):
    ABHD14A-ACY1

    ACY1 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for ACY1
    PGOHUM00000234959


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/161 NCBI SNPs in ACY1 are shown (see all 161    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1219127011,2
    C,Fpathogenic80448939(+) TACACG/ACCTGC 10 /H /R mis12Minor allele frequency- A:0.01NA EU 5875
    rs1219126981,2
    C,Fpathogenic80449144(+) ATATCC/TGCGCG 10 R C mis12Minor allele frequency- T:0.00NA EU 5543
    rs1219127001,2
    C,Fpathogenic80450972(+) GGGTGC/TGGGTT 10 R W mis12Minor allele frequency- T:0.00NA EU 5241
    rs1449506181,2
    --52015331(+) GAATGC/GGCCAC 7 -- int1 us2k10--------
    rs1489686011,2
    --52015332(+) AATGCG/TCCACT 7 -- us2k1 int10--------
    rs1149529471,2
    --52015397(+) GGTATG/AATGGC 7 -- int1 us2k11Minor allele frequency- A:0.01NA 120
    rs1437884941,2
    --52015595(+) GGGAAC/TGCGAT 7 -- int1 us2k10--------
    rs1511137571,2
    --52015598(+) AACGCG/TATTTA 7 -- int1 us2k10--------
    rs1426610761,2
    --52015770(+) GTGGCA/GGGTGA 6 -- us2k1 int10--------
    rs1832357411,2
    --52016222(+) GGCAGC/GAGAGT 6 -- us2k1 int10--------

    HapMap Linkage Disequilibrium report for ACY1 (52009066 - 52023218 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for ACY1: --
    Human Gene Mutation Database (HGMD): ACY1

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ACY1
    DNA2.0 Custom Variant and Variant Library Synthesis for ACY1

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ACY1 for disorders           About GeneDecksing

    OMIM gene information: 104620   
    OMIM disorders: 609924  
    UniProtKB/Swiss-Prot: ACY1_HUMAN, Q03154
  • Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D) [MIM:609924]. ACY1D results in a metabolic
  • disorder manifesting with encephalopathy, unspecific psychomotor delay, psychomotor delay with atrophy of the vermis
    and syringomyelia, marked muscular hypotonia or normal clinical features. Epileptic seizures are a frequent feature.
    All affected individuals exhibit markedly increased urinary excretion of several N-acetylated amino acids

    16 diseases for ACY1:    About MalaCards
    aminoacylase 1 deficiency    metabolic disorders    lung cancer    greig cephalopolysyndactyly syndrome
    systolic heart failure    syringomyelia    herpes simplex    renal cell carcinoma
    hypotonia    lung carcinoma    carcinoma    breast cancer
    neuroblastoma    tuberculosis    mycobacterium tuberculosis    alcoholism

    6 Novoseek disease relationships for ACY1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    carcinoma renal cell 33.3 2 1707030 (1), 19028700 (1)
    cancer lung 17.7 2 1707030 (1)
    small cell lung cancer 16.3 2 8394326 (1), 2006156 (1)
    tumors 0 5 19028700 (2), 1707030 (1), 8394326 (1), 12548635 (1)
    carcinoma 0 1 10516434 (1)
    cancer 0 1 16950796 (1)


    Export disorders for ACY1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ACY1 gene, integrated from 9 sources (see all 94):
    (articles sorted by number of sources associating them with ACY1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Mutations in ACY1, the gene encoding aminoacylase 1, cause a novel inborn error of metabolism. (PubMed id 16465618)1, 2, 9 Sass J.O.... Omran H. (2006)
    2. Human aminoacylase-1. Cloning, sequence, and expression analysis of a chromosome 3p21 gene inactivated in small cell lung cancer. (PubMed id 8394326)1, 2, 9 Cook R.M.... Miller Y.E. (1993)
    3. Human aminoacylase-1: cloning, regional assignment to distal chromosome 3p21.1, and identification of a cross-hybridizing sequence on chromosome 18. (PubMed id 1707030)1, 3, 9 Miller Y.E....Fisher J.H. (1990)
    4. The nucleotide sequence of human aminoacylase-1. (PubMed id 8357837)1, 2, 9 Mitta M.... Tsunasawa S. (1993)
    5. Neurological findings in aminoacylase 1 deficiency. (PubMed id 17562838)1, 2, 9 Sass J.O.... Omran H. (2007)
    6. Essential roles of zinc ligation and enzyme dimerization for catalysis in the aminoacylase-1/M20 family. (PubMed id 12933810)1, 2, 9 Lindner H.A....Menard R. (2003)
    7. Aminoacylase I deficiency: a novel inborn error of metabolism. (PubMed id 16274666)1, 2, 9 Van Coster R.N....Lissens W. (2005)
    8. The molecular basis of aminoacylase 1 deficiency. (PubMed id 21414403)1, 2 Sommer A....Sass J.O. (2011)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. Confirmation and further regional assignment of aminoacylase 1 (acy-1) on human chromosome 3 using a simplified detection method. (PubMed id 6948533)1, 3 Voss R....Bobrow M. (1980)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 95 HGNC: 177 AceView: ACY1andDKFZP564O243 Ensembl:ENSG00000243989 euGenes: HUgn95
    ECgene: ACY1 Kegg: 95 H-InvDB: ACY1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ACY1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for ACY1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ACY1 gene:
    Search GeneIP for patents involving ACY1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Antibodies for ACY1 (Aminoacylase/ACY1)   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Recombinant/Natural Proteins for ACY1 (Aminoacylase/ACY1)  
     OriGene Antibodies for ACY1   OriGene shRNA RFP for ACY1  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ACY1   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ACY1  
     OriGene Protein Over-expression Lysate for ACY1   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for ACY1   OriGene 3'-UTR Clone for ACY1  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ACY1  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for ACY1   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for ACY1   OriGene Custom Protein Services for ACY1  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ACY1
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ACY1
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ACY1
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ACY1
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ACY1
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ACY1
     GenScript Custom Purified and Recombinant Proteins Services for ACY1 GenScript cDNA clones with any tag delivered in your preferred vector for ACY1
     GenScript Custom Assay Services for ACY1 GenScript Custom Superior Antibodies Services for ACY1
     GenScript Custom overexpressing Cell Line Services for ACY1 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in ACY1 promoter
     Search Chromatin IP Primers for ACY1
     RT2 qPCR Primer Assay in human, mouse, rat ACY1
     Search GNC Networks for ACY1
     SABiosciences PCR Arrays including human, mouse, rat ACY1
     Search Tocris compounds for ACY1
     Proteins and Antibodies for ACY1
     cDNA Clones for ACY1
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     ACY1 antibodies
     ACY1 proteins
     ACY1 lysates
     Antibodies for ACY1
     See all of Abcam's Antibodies, Kits and Proteins for ACY1
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Recombinant Protein for ACY1




     ACY1 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for ACY1
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACY1
     SwitchGear 3'UTR luciferase reporter plasmids for ACY1
     SwitchGear Promoter luciferase reporter plasmids for ACY1
     ThermoFisher Antibodies for ACY1
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ACY1
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for ACY1
    Sirion Biotech Customized:
     stable knockdown cell line services for ACY1
     inducible knockdown cell line services for ACY1
     design and validation of potent shRNA sequences against ACY1
     adenovirus for potent knockdown of ACY1
     adenovirus for overexpression of ACY1
     stable overexpressing cell line services for ACY1
     inducible overexpressing cell line services for ACY1
           
    GeneCards Homepage - Last full update: 18 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      ACY1 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 106 solr: 1.4