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Aliases for ACVR2B-AS1 Gene

Subcategory (RNA class) for ACVR2B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ACVR2B-AS1 Gene

  • ACVR2B Antisense RNA 1 2 3 5
  • ACVR2B Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ACVR2B-AS1 Gene

Summaries for ACVR2B-AS1 Gene

GeneCards Summary for ACVR2B-AS1 Gene

ACVR2B-AS1 (ACVR2B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACVR2B-AS1 Gene

Genomics for ACVR2B-AS1 Gene

Regulatory Elements for ACVR2B-AS1 Gene

Enhancers for ACVR2B-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G038163 2 FANTOM5 Ensembl ENCODE dbSUPER 10.2 +287.6 287622 8.0 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 OXSR1 ACAA1 MYD88 C3orf35 GORASP1 SLC22A13 ACVR2B-AS1 VILL PLCD1 DLEC1
GH03G038452 1.1 ENCODE 0.7 +0.0 47 4.0 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1 SNORA62 GORASP1 OXSR1 EXOG ACVR2B ACVR2B-AS1
GH03G038457 1 Ensembl ENCODE 0.7 -4.9 -4869 4.3 ETV1 ZNF133 MAX ZIC2 ZFHX2 SCRT2 EGR2 STAT1 ATF2 GABPA EXOG RNU6-1227P ACVR2B-AS1 GC03P038491
GH03G038458 0.6 ENCODE 0.7 -2.6 -2625 0.2 PKNOX1 ZNF316 IKZF1 ZNF133 MAFG MAFK GABPA ACVR2B-AS1 GC03P038491
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ACVR2B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000151002 220 2401 HDGF PKNOX1 CREB3L1 AGO1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1

Genomic Location for ACVR2B-AS1 Gene

Chromosome:
3
Start:
38,451,027 bp from pter
End:
38,454,820 bp from pter
Size:
3,794 bases
Orientation:
Minus strand

Genomic View for ACVR2B-AS1 Gene

Genes around ACVR2B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACVR2B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACVR2B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACVR2B-AS1 Gene

Proteins for ACVR2B-AS1 Gene

Post-translational modifications for ACVR2B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACVR2B-AS1 Gene

Domains & Families for ACVR2B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACVR2B-AS1 Gene

Function for ACVR2B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACVR2B-AS1 Gene

Localization for ACVR2B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACVR2B-AS1 Gene

Pathways & Interactions for ACVR2B-AS1 Gene

SuperPathways for ACVR2B-AS1 Gene

No Data Available

Interacting Proteins for ACVR2B-AS1 Gene

Gene Ontology (GO) - Biological Process for ACVR2B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACVR2B-AS1 Gene

Drugs & Compounds for ACVR2B-AS1 Gene

No Compound Related Data Available

Transcripts for ACVR2B-AS1 Gene

mRNA/cDNA for ACVR2B-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ACVR2B-AS1 Gene

ACVR2B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ACVR2B-AS1 Gene

No ASD Table

Relevant External Links for ACVR2B-AS1 Gene

GeneLoc Exon Structure for
ACVR2B-AS1
ECgene alternative splicing isoforms for
ACVR2B-AS1

Expression for ACVR2B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACVR2B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ACVR2B-AS1 Gene

This gene is overexpressed in Muscle - Skeletal (x6.8).

SOURCE GeneReport for Unigene cluster for ACVR2B-AS1 Gene:

Hs.570596
genes like me logo Genes that share expression patterns with ACVR2B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACVR2B-AS1 Gene

Orthologs for ACVR2B-AS1 Gene

Evolution for ACVR2B-AS1 Gene

ENSEMBL:
Gene Tree for ACVR2B-AS1 (if available)
TreeFam:
Gene Tree for ACVR2B-AS1 (if available)

No data available for Orthologs for ACVR2B-AS1 Gene

Paralogs for ACVR2B-AS1 Gene

No data available for Paralogs for ACVR2B-AS1 Gene

Variants for ACVR2B-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACVR2B-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000032827 -- 38,455,444(+) GCCGC(C/T)TGGAG intron-variant, upstream-variant-2KB
rs1000489390 -- 38,455,691(+) AGTAC(C/T)GTATG intron-variant, upstream-variant-2KB
rs1000739674 -- 38,454,067(+) CGCCG(C/T)CCCCC intron-variant, upstream-variant-2KB
rs1000760378 -- 38,453,667(+) CCCAT(C/T)CCCGC intron-variant, upstream-variant-2KB
rs1001083923 -- 38,454,610(+) CGCCC(C/T)TGCGA intron-variant, nc-transcript-variant, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for ACVR2B-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1073218 CNV deletion 25765185
nsv1144986 CNV deletion 24896259
nsv954465 CNV deletion 24416366

Relevant External Links for ACVR2B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACVR2B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ACVR2B-AS1 Gene

Disorders for ACVR2B-AS1 Gene

Relevant External Links for ACVR2B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ACVR2B-AS1

No disorders were found for ACVR2B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACVR2B-AS1 Gene

Publications for ACVR2B-AS1 Gene

No publications were found for ACVR2B-AS1 Gene.

Products for ACVR2B-AS1 Gene

Sources for ACVR2B-AS1 Gene

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