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Aliases & Descriptions for ACVR1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ACTR-I 3 ACTRI 2 ACVR1A 1 , 2 ACVRLK2 2 , 3 , 5 ALK-2 3 ALK2 1 , 2 , 5 EC 2.7.11.30 3 FOP 2 , 5 SKR1 1 , 2 , 3 TSR-I 3 TSRI 2
Descriptions Activin receptor type I 3 Activin receptor-like kinase 2 3 Serine/threonine-protein kinase receptor R1 2 , 3 TGF-B superfamily receptor type I 2 , 3 activin A receptor, type I 2 activin A receptor, type II-like kinase 2 2 hydroxyalkyl-protein kinase 2
Search outside databases for aliases for ACVR1 genePrevious GC identifers: GC02M156524 GC02M157121 GC02M158557 GC02M158795 GC02M158418
Summaries for ACVR1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ACVR1 : Activins are dimeric growth and differentiation factors which belong to the transforming growthfactor-beta (TGF-beta) superfamily of structurally related signaling proteins. Activins signalthrough a heteromeric complex of receptor serine kinases which include at least two type I ( I andIB) and two type II (II and IIB) receptors. These receptors are all transmembrane proteins,composed of a ligand-binding extracellular domain with cysteine-rich region, a transmembranedomain, and a cytoplasmic domain with predicted serine/threonine specificity. Type I receptors areessential for signaling; and type II receptors are required for binding ligands and for expressionof type I receptors. Type I and II receptors form a stable complex after ligand binding, resultingin phosphorylation of type I receptors by type II receptors. This gene encodes activin A type Ireceptor which signals a particular transcriptional response in concert with activin type IIreceptors. Mutations in this gene are associated with fibrodysplasia ossificans progressive.[provided by RefSeq] UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771 Function : On ligand binding, forms a receptor complex consisting of two type II and two type Itransmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type Ireceptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.Receptor for activin. May be involved for left-right pattern formation during embryogenesis (Bysimilarity)
Genomic Location for ACVR1
(According to
GeneLoc and/or
HGNC , and/or
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and/or miRBase ,
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Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ACVR1 gene Entrez Gene cytogenetic band: 2q23-q24 Ensembl cytogenetic band: 2q24.1 HGNC cytogenetic band: 2q23-q24 ACVR1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M158301:
(about GC identifiers )
Start:
158,301,207 bp from pter
End:
158,440,598 bp from pter
Size:
139,392 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000002.10 NT_005403.16 Proteins for ACVR1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771 (See
protein sequence )Recommended Name: Activin receptor type-1 precursor Size : 509 amino acids; 57153 Da
Cofactor : Magnesium or manganese (By similarity)
Subcellular location : Membrane; Single-pass type I membrane protein
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001096.1 NP_001104537.1 ENSEMBL proteins: ENSP00000263640 ENSP00000387273 ENSP00000387127 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ACVR1: Assays for ACVR1:
Protein
Domains/ Families for ACVR1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q04771 ProtoNet protein and cluster: Q04771
1 Blocks protein family : IPB000472 Domain in TGF-beta receptor/activin receptor UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771 Similarity : Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFBreceptor subfamily Similarity : Contains 1 GS domainSimilarity : Contains 1 protein kinase domain
Gene Function for ACVR1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
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Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001111067 Applied Biosystems Silencer ® siRNAs for ACVR1 Sigma-Aldrich siRNA and siRNA Panels for ACVR1 Sigma-Aldrich shRNA Panels and shRNA for ACVR1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001105                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001105                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001105  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001111067 UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771 Function : On ligand binding, forms a receptor complex consisting of two type II and two type Itransmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type Ireceptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.Receptor for activin. May be involved for left-right pattern formation during embryogenesis (Bysimilarity) Catalytic activity : ATP + [receptor-protein] = ADP + [receptor-protein] phosphateEnzyme Number (IUBMB): EC 2.7.11.30
Genatlas biochemistry entry for ACVR1 :activin receptor type 1,member of transforming growth factor beta superfamily
10 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Acvr1) :5/12 Gene Ontology (GO) molecular function terms (links to tree view) (see all 12
):
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Pathways & Interactions for ACVR1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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4 Sigma-Aldrich "Your Favorite Gene" Pathways for ACVR1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ACVR1 5/51 Interacting proteins for ACVR1 (ENSP00000263640 3 Q04771 2 ) via UniProtKB, MINT, and/or STRING (see all 51
)About this table 5/24 Gene Ontology (GO) biological process terms (links to tree view) (see all 24
):
GO ID Qualified GO term Evidence PubMed IDs GO:0000082 G1/S transition of mitotic cell cycle
IMP 9884026 GO:0001569 patterning of blood vessels
IEA -- GO:0001655 urogenital system development
IEA -- GO:0001701 in utero embryonic development
IEA -- GO:0001702 gastrulation with mouth forming second
IEA --
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Drugs & Compounds for ACVR1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ACVR1 2 Novoseek chemical compound relationships for ACVR1 gene
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Transcripts for ACVR1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001111067 Sigma-Aldrich siRNA and siRNA Panels for ACVR1 Sigma-Aldrich shRNA Panels and shRNA for ACVR1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001105 NM_001111067
REFSEQ mRNAs for ACVR1 gene (2 alternative transcripts): NM_001105.4 NM_001111067.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001105 NM_001111067
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001105                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001105                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001105  
Additional cDNA sequence: AK297765.1 AK313630.1 BC033867.1 BC036748.1 CR623544.1 L02911.1 Z22534.1
11 DOTS entries : DT.443257 DT.100749946 DT.91760723 DT.91838442 DT.100749947 DT.97767836 DT.97769140 DT.120984794 DT.40220054 DT.97804988 DT.95096700
24/137 AceView cDNA sequences (see all 137
):CN481300 BU629124 H96913 AW613513 AI520721 L02911 N66988 BX455529 CD655050 R45384 BC033867 BM545650 T29135 AI493854 AW118702 BM128460 CR623544 BM703959 BC036748 R20290 BX505932 BM851122 AW029054 AI623705
highest scoring ESTs for ACVR1 :BC033867 BC036748 L02911 Z22534 AA024668 AA025278 AA053838 AA136882 AA136910 AA298554
Unigene Cluster for ACVR1: Activin A receptor, type I Hs.470316 [show with all ESTs ] Unigene Representative Sequence: BC036748 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for ACVR1 ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b SP1 :                                   SP2 :       -   -                           SP3 :     -   -                             SP4 :     -   -   -                          
About this scheme ECgene alternative splicing isoforms for ACVR1 3 Ensembl transcripts including schematic representations : ENST00000263640
ENST00000409283
ENST00000410057
Expression for ACVR1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ACVR1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ACVR1 1 / 2 / 3
3 probe-sets matching ACVR1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TGCTGATGTTSOURCE GeneReport for Unigene cluster: Hs.470316 Expression variation in blood from EXPOLDB for ACVR1
UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771 Tissue specificity : Expressed in normal parenchymal cells, endothelial cells, fibroblasts andtumor-derived epithelial cells
Orthologs for ACVR1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ACVR1 gene from 5/13 species (see all 13
)
About this table Species with no ortholog for ACVR1 ENSEMBL Gene Tree for ACVR1 Paralogs for ACVR1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ACVR1 gene ACVRL1 2
SNPs/Variants for ACVR1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ACVR1 (up to first 250kb)
Disorders & Mutations for ACVR1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 102576 disorders : 135100 UniProtKB/Swiss-Prot: ACVR1_HUMAN, Q04771
Defects in ACVR1 are a cause of fibrodysplasia ossificans progressiva (FOP) [MIM:135100].FOP is a rare autosomal dominant disorder of skeletal malformations and progressive extraskeletalossification. Heterotopic ossification in FOP begins in childhood and can be induced by trauma ormay occur without warning. Bone formation is episodic and progressive, leading to extra-articularankylosis of all major joints of the axial and appendicular skeleton, rendering movementimpossible
7 Novoseek disease relationships for ACVR1 gene
About this table Human Gene Mutation Database : ACVR1 Human Genome Epidemiology Navigator: ACVR1 (4 documents)
Medical News for ACVR1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ACVR1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/122 PubMed articles for ACVR1 gene (see all 122
): Activin receptor-like kinases: a novel subclass of cell-surface receptors with predicted serine/threonine kinase activity. (PubMed id 8397373) 1, 2, 3, 4 ten Dijke P.... Miyazono K. (1993) A widely expressed transmembrane serine/threonine kinase that does not bind activin, inhibin, transforming growth factor beta, or bone morphogenic factor. (PubMed id 8389764) 1, 3, 4 Matsuzaki K. and McKeehan W.L. (1993) A recurrent mutation in the BMP type I receptor ACVR1 causes inherited and sporadic fibrodysplasia ossificans progressiva. (PubMed id 16642017) 3, 4 Shore E.M....Kaplan F.S. (2006) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Variants in the ACVR1 gene are associated with AMH levels in women with polycystic ovary syndrome. (PubMed id 18854405) 1, 3 Kevenaar M.E....Visser J.A. (2009) Activin-A up-regulates type I activin receptor mRNA levels in human immortalized extravillous trophoblast cells. (PubMed id 12702211) 1, 3 Chen V.T....Leung P.C. (2003) Specific activation of Smad1 signaling pathways by the BMP7 type I receptor, ALK2. (PubMed id 9748228) 1, 3 Macias-Silva M....Wrana J.L. (1998) A unique mutation of ALK2, G356D, found in a patient with fibrodysplasia ossificans progressiva is a moderately activated BMP type I receptor. (PubMed id 18952055) 1, 3 Fukuda T....Katagiri T. (2008) Identification of type I receptors for osteogenic protein-1 and bone morphogenetic protein-4. (PubMed id 8006002) 1, 3 ten Dijke P....Miyazono K. (1994) Constitutively activated ALK2 and increased SMAD1/5 cooperatively induce bone morphogenetic protein signaling in fibrodysplasia ossificans progressiva. (PubMed id 18684712) 1, 3 Fukuda T....Katagiri T. (2009)
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Genome Databases showing ACVR1
(According to
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
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Specialized Databases showing ACVR1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ACVR1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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