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Aliases & Descriptions for ACTR2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Descriptions ARP2 (actin-related protein 2, yeast) homolog 1 ARP2 actin-related protein 2 homolog (yeast) 2 Actin-like protein 2 3 actin-related protein 2 2
Search outside databases for aliases for ACTR2 genePrevious GC identifers: GC02P065588 GC02P065412 GC02P065429
Summaries for ACTR2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ACTR2 : The specific function of this gene has not yet been determined; however, the protein it encodes isknown to be a major constituent of the ARP2/3 complex. This complex is located at the cell surfaceand is essential to cell shape and motility through lamellipodial actin assembly and protrusion.Two transcript variants encoding different isoforms have been found for this gene. [provided byRefSeq] UniProtKB/Swiss-Prot: ARP2_HUMAN, P61160 Function : Functions as ATP-binding component of the Arp2/3 complex which is involved in regulationof actin polymerization and together with an activating nucleation-promoting factor (NPF) mediatesthe formation of branched actin networks. Seems to contact the pointed end of the daughter actinfilament
Gene Wiki entry for ACTR2
Genomic Location for ACTR2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ACTR2 gene Entrez Gene cytogenetic band: 2p14 Ensembl cytogenetic band: 2p14 HGNC cytogenetic band: 2p14 ACTR2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P065366:
(about GC identifiers )
Start:
65,308,406 bp from pter
End:
65,351,891 bp from pter
Size:
43,486 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_022184.14 Proteins for ACTR2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ARP2_HUMAN, P61160 (See
protein sequence )Recommended Name: Actin-related protein 2 Size : 394 amino acids; 44761 Da
Subunit : Component of the Arp2/3 complex composed of ARP2, ARP3, ARPC1B/p41-ARC, ARPC2/p34-ARC,ARPC3/p21-ARC, ARPC4/p20-ARC and ARPC5/p16-ARC
Subcellular location : Cytoplasm, cytoskeleton. Cell projection
Secondary accessions : O15142 Q96C82
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001005386.1 NP_005713.1 ENSEMBL proteins: ENSP00000387136 ENSP00000367220 ENSP00000260641 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ACTR2: Assays for ACTR2:
Protein
Domains/ Families for ACTR2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P61160 ProtoNet protein and cluster: P61160
UniProtKB/Swiss-Prot: ARP2_HUMAN, P61160 Similarity : Belongs to the actin family. ARP2 subfamily
Gene Function for ACTR2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
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Clones , and
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siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_005722 Applied Biosystems Silencer ® siRNAs for ACTR2 Sigma-Aldrich siRNA for ACTR2 Sigma-Aldrich shRNA for ACTR2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005386                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005386                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001005386  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001005386 UniProtKB/Swiss-Prot: ARP2_HUMAN, P61160 Function : Functions as ATP-binding component of the Arp2/3 complex which is involved in regulationof actin polymerization and together with an activating nucleation-promoting factor (NPF) mediatesthe formation of branched actin networks. Seems to contact the pointed end of the daughter actinfilament
4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ACTR2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/9 Sigma-Aldrich "Your Favorite Gene" Pathways for ACTR2 (Your Favorite Gene powered by Ingenuity) (see all 9
) Gene Network CentralTM Interacting Genes and Proteins Network for ACTR2 5/17 Interacting proteins for ACTR2 (ENSP00000367220 3 P61160 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 17
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
About this table
Drugs & Compounds for ACTR2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ACTR2 1 Novoseek chemical compound relationship for ACTR2 gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
atp
7.96
5
11752435 (3), 17251352 (1)
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Transcripts for ACTR2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_005722 Sigma-Aldrich siRNA for ACTR2 Sigma-Aldrich shRNA for ACTR2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001005386 NM_005722
REFSEQ mRNAs for ACTR2 gene (2 alternative transcripts): NM_001005386.2 NM_005722.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001005386 NM_005722
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005386                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001005386                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001005386  
Additional cDNA sequence: AB462501.1 AF006082.1 AK025051.1 AK295157.1 AK301634.1 AK315205.1 AL049356.1 BC014546.1 BC036253.1 BX649080.1 CR593126.1
23 DOTS entries : DT.101961003 DT.95156078 DT.75189376 DT.100877089 DT.100877083 DT.100877085 DT.95245735 DT.97801854 DT.95074926 DT.97791493 DT.99926655 DT.120826962 DT.121011729 DT.121011735 DT.121011911 DT.121011966 DT.97760126 DT.100649879 DT.100877081 DT.121011721 DT.121493112 DT.91786737 DT.95378282
24/845 AceView cDNA sequences (see all 845
):BM708911 BU542055 CF137112 AI753315 AW338305 CA416792 AI718624 CB854590 F07421 AL701801 BM450277 AL712920 BM463962 BU625727 CN480414 BU175810 AI023074 BQ424114 Z43370 BI962614 AI753490 BM090588 BX646697 F03430
highest scoring ESTs for ACTR2 :AF006082 AA007317 AA021093 AA026823 AA026955 AA034103 AA064957 AA075106 AA089505 AA134171
Unigene Cluster for ACTR2: ARP2 actin-related protein 2 homolog (yeast) Hs.719274 [show with all ESTs ] Unigene Representative Sequence: NM_001005386 GeneLoc Exon Structure 3 Ensembl transcripts including schematic representations : ENST00000409926
ENST00000377982
ENST00000260641
Expression for ACTR2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ACTR2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ACTR2 1 / 2 / 3
12 probe-sets matching ACTR2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.719274 Expression variation in blood from EXPOLDB for ACTR2
Orthologs for ACTR2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ACTR2 gene from 5/22 species (see all 22
)
About this table Species with no ortholog for ACTR2 ENSEMBL Gene Tree for ACTR2 Paralogs for ACTR2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ACTR2 gene ACTR1A 2 ACTR1B 2 ARPM1 2 ENSG00000213985 2
SNPs/Variants for ACTR2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ACTR2 (up to first 250kb)
Disorders & Mutations for ACTR2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 604221 4 Novoseek disease relationships for ACTR2 gene
About this table
Medical News for ACTR2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ACTR2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/78 PubMed articles for ACTR2 gene (see all 78
): The human Arp2/3 complex is composed of evolutionarily conserved subunits and is localized to cellular regions of dynamic actin filament assembly. (PubMed id 9230079) 2, 3, 4 Welch M.D....Mitchison T.J. (1997) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Reconstitution of human Arp2/3 complex reveals critical roles of individual subunits in complex structure and activity. (PubMed id 11741539) 3, 4 Gournier H.... Welch M.D. (2001) Actin polymerization is induced by Arp2/3 protein complex at the surface of Listeria monocytogenes. (PubMed id 9000076) 3, 4 Welch M.D.... Mitchison T.J. (1997) Coexpression of actin-related protein 2 and Wiskott-Aldrich syndrome family verproline-homologous protein 2 in adenocarcinoma of the lung. (PubMed id 16638851) 1, 3 Semba S....Mukai K. (2006) Correlation between liver metastasis of the colocalization of actin-related protein 2 and 3 complex and WAVE2 in colorectal carcinoma. (PubMed id 17459058) 1, 3 Iwaya K....Mukai K. (2007) Actin-related protein (Arp2) inserts into artificial lipid membranes. (PubMed id 12468383) 1, 3 Goldmann W.H. and Isenberg G. (2002) Interaction of cortactin and N-WASp with Arp2/3 complex. (PubMed id 12176354) 1, 3 Weaver A.M....Cooper J.A. (2002) Involvement of Arp2/3 complex in MCP-1-induced chemotaxis. (PubMed id 16004967) 1, 3 Mukai Y....Mukai K. (2005) The complex containing actin-related proteins Arp2 and Arp3 is required for the motility and integrity of yeast actin patches. (PubMed id 9210376) 1, 3 Winter D....Li R. (1997)
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Genome Databases showing ACTR2
(According to
Entrez Gene ,
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AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ACTR2
(According to HUGE )
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Specialized Databases showing ACTR2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ACTR2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ACTR2:
Antibodies & Assays for ACTR2   (ARP2)
Recombinant Proteins (Arp2 ) Antibodies (Arp2 )
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