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Aliases for ACTR10 Gene

Aliases for ACTR10 Gene

  • Actin-Related Protein 10 Homolog (S. Cerevisiae) 2 3
  • Actin-Related Protein 11 3 4
  • HARP11 3 4
  • ACTR11 3 4
  • Arp11 3 4
  • Actin-Related Protein 10 3

External Ids for ACTR10 Gene

Summaries for ACTR10 Gene

GeneCards Summary for ACTR10 Gene

ACTR10 (Actin-Related Protein 10 Homolog (S. Cerevisiae)) is a Protein Coding gene. Among its related pathways are Cytoskeleton remodeling Neurofilaments and Cell cycle_Spindle assembly and chromosome separation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTR10 Gene

Genomics for ACTR10 Gene

Genomic Location for ACTR10 Gene

Start:
58,200,080 bp from pter
End:
58,235,636 bp from pter
Size:
35,557 bases
Orientation:
Plus strand

Genomic View for ACTR10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ACTR10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTR10 Gene

Regulatory Elements for ACTR10 Gene

Proteins for ACTR10 Gene

  • Protein details for ACTR10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NZ32-ARP10_HUMAN
    Recommended name:
    Actin-related protein 10
    Protein Accession:
    Q9NZ32
    Secondary Accessions:
    • Q9H9Y5
    • Q9NWY2

    Protein attributes for ACTR10 Gene

    Size:
    417 amino acids
    Molecular mass:
    46307 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ACTR10 Gene

Proteomics data for ACTR10 Gene at MOPED

Post-translational modifications for ACTR10 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys26, Lys44, and Lys375

No data available for DME Specific Peptides for ACTR10 Gene

Domains for ACTR10 Gene

Protein Domains for ACTR10 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for ACTR10 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NZ32

UniProtKB/Swiss-Prot:

ARP10_HUMAN
Family:
  • Belongs to the actin family.:
    • Q9NZ32
genes like me logo Genes that share domains with ACTR10: view

No data available for Gene Families for ACTR10 Gene

Function for ACTR10 Gene

Gene Ontology (GO) - Molecular Function for ACTR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ACTR10: view

Phenotypes for ACTR10 Gene

genes like me logo Genes that share phenotypes with ACTR10: view

miRNA for ACTR10 Gene

miRTarBase miRNAs that target ACTR10

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for ACTR10 Gene

Localization for ACTR10 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ACTR10 Gene

Cytoplasm, cytoskeleton.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ACTR10 Gene COMPARTMENTS Subcellular localization image for ACTR10 gene
Compartment Confidence
cytoskeleton 2
cytosol 2
nucleus 2
peroxisome 2

Gene Ontology (GO) - Cellular Components for ACTR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005869 dynactin complex IEA --
genes like me logo Genes that share ontologies with ACTR10: view

Pathways for ACTR10 Gene

genes like me logo Genes that share pathways with ACTR10: view

Pathways by source for ACTR10 Gene

Gene Ontology (GO) - Biological Process for ACTR10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007018 microtubule-based movement IEA --
genes like me logo Genes that share ontologies with ACTR10: view

Transcripts for ACTR10 Gene

Unigene Clusters for ACTR10 Gene

Actin-related protein 10 homolog (S. cerevisiae):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ACTR10 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11
SP1: -
SP2:
SP3: - -
SP4:
SP5:

Relevant External Links for ACTR10 Gene

GeneLoc Exon Structure for
ACTR10
ECgene alternative splicing isoforms for
ACTR10

Expression for ACTR10 Gene

mRNA expression in normal human tissues for ACTR10 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ACTR10 Gene

SOURCE GeneReport for Unigene cluster for ACTR10 Gene Hs.509451

genes like me logo Genes that share expressions with ACTR10: view

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ACTR10 Gene

Orthologs for ACTR10 Gene

This gene was present in the common ancestor of animals.

Orthologs for ACTR10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ACTR10 35
  • 99.85 (n)
  • 100 (a)
ACTR10 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ACTR10 35
  • 92.57 (n)
  • 95.92 (a)
ACTR10 36
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ACTR10 35
  • 92.01 (n)
  • 96.4 (a)
ACTR10 36
  • 96 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Actr10 35
  • 90.65 (n)
  • 95.2 (a)
Actr10 16
Actr10 36
  • 95 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ACTR10 36
  • 82 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ACTR10 36
  • 89 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Actr10 35
  • 89.85 (n)
  • 94.96 (a)
chicken
(Gallus gallus)
Aves -- 36
  • 85 (a)
OneToMany
ACTR10 35
  • 79.3 (n)
  • 87.05 (a)
ACTR10 36
  • 87 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia ACTR10 36
  • 88 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.22802 35
tropical clawed frog
(Silurana tropicalis)
Amphibia actr10 35
  • 76.58 (n)
  • 84.17 (a)
Str.5840 35
zebrafish
(Danio rerio)
Actinopterygii actr10 35
  • 67.47 (n)
  • 75.42 (a)
actr10 36
  • 75 (a)
OneToOne
zgc55635 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP012077 35
  • 48.77 (n)
  • 43.05 (a)
fruit fly
(Drosophila melanogaster)
Insecta Arp10 35
  • 49.68 (n)
  • 43.63 (a)
Arp11 36
  • 40 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea arp-11 36
  • 23 (a)
OneToOne
Species with no ortholog for ACTR10:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ACTR10 Gene

ENSEMBL:
Gene Tree for ACTR10 (if available)
TreeFam:
Gene Tree for ACTR10 (if available)

Paralogs for ACTR10 Gene

genes like me logo Genes that share paralogs with ACTR10: view

No data available for Paralogs for ACTR10 Gene

Variants for ACTR10 Gene

Sequence variations from dbSNP and Humsavar for ACTR10 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs12499 -- 58,232,213(-) AAATG(A/T)CTTAG reference, missense
rs13236 -- 58,234,591(-) GGTTA(A/G)ATATT utr-variant-3-prime
rs1190824 -- 58,204,341(+) ATTGC(A/G)CCACT intron-variant
rs1190825 -- 58,205,471(+) cgcca(C/T)gccca intron-variant
rs1210092 -- 58,207,633(+) AAGCT(C/G)ATTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ACTR10 Gene

Variant ID Type Subtype PubMed ID
nsv901985 CNV Loss 21882294
nsv901986 CNV Loss 21882294

Relevant External Links for ACTR10 Gene

HapMap Linkage Disequilibrium report
ACTR10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ACTR10 Gene

Disorders for ACTR10 Gene

No disorders were found for ACTR10 Gene.

No data available for UniProtKB/Swiss-Prot for ACTR10 Gene

Publications for ACTR10 Gene

  1. Interactions between the evolutionarily conserved, actin-related protein, Arp11, actin, and Arp1. (PMID: 12857853) Eckley D.M. … Schroer T.A. (Mol. Biol. Cell 2003) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3
  5. Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags. (PMID: 16712791) Wang A.G. … Kim N.S. (Biochem. Biophys. Res. Commun. 2006) 3

Products for ACTR10 Gene

  • antibodies-online proteins for ACTR10
  • antibodies-online antibodies for ACTR10
  • antibodies-online kits for ACTR10

Sources for ACTR10 Gene

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