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Aliases for ACTG1P20 Gene

Aliases for ACTG1P20 Gene

  • Actin Gamma 1 Pseudogene 20 2 3 5

External Ids for ACTG1P20 Gene

Summaries for ACTG1P20 Gene

GeneCards Summary for ACTG1P20 Gene

ACTG1P20 (Actin Gamma 1 Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTG1P20 Gene

Genomics for ACTG1P20 Gene

Regulatory Elements for ACTG1P20 Gene

Enhancers for ACTG1P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G027516 2.1 FANTOM5 Ensembl ENCODE dbSUPER 59 +199.9 199940 13.7 CREB3L1 ZFP64 DMAP1 YY1 ZNF548 ZNF263 SP3 MCM3 MEF2D SSRP1 ACTG1P20 NPM1P39 PHACTR4 CD164L2 WASF2 SYTL1 ENSG00000231344 MAP3K6 FAM76A SFN
GH01G026691 3.2 FANTOM5 Ensembl ENCODE dbSUPER 37.2 -626.8 -626817 12.9 MLX CREB3L1 AGO1 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 HMGN2 NPM1P39 PIGV ACTG1P20 GPATCH3 ZNF593 LOC101928728 SFN ENSG00000226698 FAM46B
GH01G026618 2.1 FANTOM5 Ensembl ENCODE dbSUPER 46.2 -703.5 -703479 4.0 CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF416 ZNF143 ZNF548 ZNF263 SP3 HMGN2 ACTG1P20 ZNF593 AHDC1 LOC101928324 WASF2 NPM1P39 RPL17P9 ARID1A PIGV
GH01G026824 1.8 FANTOM5 ENCODE dbSUPER 50.3 -496.5 -496521 6.5 CREB3L1 AGO1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 ZDHHC18 ACTG1P20 HMGN2 ENSG00000231344 GPATCH3 NPM1P39 LOC101928324 ZNF593 SFN ENSG00000243659
GH01G026852 1.3 ENCODE dbSUPER 61.7 -469.8 -469846 3.7 HDGF PKNOX1 ZNF493 ZFP64 FEZF1 ZBTB7B ZNF121 ZNF302 ZNF143 KLF7 ACTG1P20 NPM1P39 HMGN2 AHDC1 PIGV ZNF593 ZDHHC18 LOC101928728 GPATCH3 NUDC
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ACTG1P20 on UCSC Golden Path with GeneCards custom track

Promoters for ACTG1P20 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000003695 -1473 1600 MLX CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3

Genomic Location for ACTG1P20 Gene

Chromosome:
1
Start:
27,323,874 bp from pter
End:
27,326,525 bp from pter
Size:
2,652 bases
Orientation:
Plus strand

Genomic View for ACTG1P20 Gene

Genes around ACTG1P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTG1P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTG1P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTG1P20 Gene

Proteins for ACTG1P20 Gene

Post-translational modifications for ACTG1P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTG1P20 Gene

Domains & Families for ACTG1P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTG1P20 Gene

Function for ACTG1P20 Gene

Phenotypes for ACTG1P20 Gene

GenomeRNAi human phenotypes for ACTG1P20:
genes like me logo Genes that share phenotypes with ACTG1P20: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTG1P20 Gene

Localization for ACTG1P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACTG1P20 Gene

Pathways & Interactions for ACTG1P20 Gene

SuperPathways for ACTG1P20 Gene

No Data Available

Interacting Proteins for ACTG1P20 Gene

Gene Ontology (GO) - Biological Process for ACTG1P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTG1P20 Gene

Drugs & Compounds for ACTG1P20 Gene

No Compound Related Data Available

Transcripts for ACTG1P20 Gene

mRNA/cDNA for ACTG1P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTG1P20 Gene

No ASD Table

Relevant External Links for ACTG1P20 Gene

GeneLoc Exon Structure for
ACTG1P20
ECgene alternative splicing isoforms for
ACTG1P20

Expression for ACTG1P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of ACTG1P20 Gene:

ACTG1P20
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTG1P20 Gene

Orthologs for ACTG1P20 Gene

Evolution for ACTG1P20 Gene

ENSEMBL:
Gene Tree for ACTG1P20 (if available)
TreeFam:
Gene Tree for ACTG1P20 (if available)

No data available for Orthologs for ACTG1P20 Gene

Paralogs for ACTG1P20 Gene

No data available for Paralogs for ACTG1P20 Gene

Variants for ACTG1P20 Gene

Sequence variations from dbSNP and Humsavar for ACTG1P20 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1001073219 -- 27,322,724(+) CTGGT(G/T)TATTC intron-variant, upstream-variant-2KB
rs1001334177 -- 27,323,859(+) CCCTG(C/T)GTTCC intron-variant, upstream-variant-2KB
rs1001397809 -- 27,325,109(+) GTGGC(G/T)CAAGT intron-variant, nc-transcript-variant
rs1001495617 -- 27,326,726(+) TGCTG(A/T)GTTAG intron-variant, downstream-variant-500B
rs1002506637 -- 27,325,490(+) GGCAT(C/G)CACGA intron-variant, nc-transcript-variant

Relevant External Links for ACTG1P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTG1P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTG1P20 Gene

Disorders for ACTG1P20 Gene

Relevant External Links for ACTG1P20

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ACTG1P20

No disorders were found for ACTG1P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACTG1P20 Gene

Publications for ACTG1P20 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for ACTG1P20 Gene

Sources for ACTG1P20 Gene

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