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Aliases for ACTG1P17 Gene

Aliases for ACTG1P17 Gene

  • Actin Gamma 1 Pseudogene 17 2 3 5

External Ids for ACTG1P17 Gene

Summaries for ACTG1P17 Gene

GeneCards Summary for ACTG1P17 Gene

ACTG1P17 (Actin Gamma 1 Pseudogene 17) is a Pseudogene.

Additional gene information for ACTG1P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTG1P17 Gene

Genomics for ACTG1P17 Gene

Regulatory Elements for ACTG1P17 Gene

Enhancers for ACTG1P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15H083561 0.7 dbSUPER 5.1 -825.3 -825328 7 CTCF ZNF654 ZSCAN4 EBF1 ZBTB40 RAD21 ZFHX2 NFIC CTBP1 SMC3 ADAMTSL3 HOMER2 GOLGA6L5P ACTG1P17 RN7SL331P UBE2Q2L GOLGA2P7 GC15P083560 GC15M083567
GH15H083570 0.6 dbSUPER 5.1 -833.5 -833533 5 CTCF ZNF654 NR2F1 RAD21 RARA SCRT2 ZNF143 SMC3 NR2F6 ZNF24 ADAMTSL3 ENSG00000259683 ACTG1P17 GOLGA6L5P GOLGA2P7 UBE2Q2L UBE2Q2P1 GC15P083571 GC15P083593
GH15H083538 0.6 dbSUPER 4.4 -799.4 -799417 1 ZNF316 MAFG NFE2 EMSY MAFK NFE2L2 ACTG1P17 GC15P083537 GC15P083548
GH15H083550 0.2 dbSUPER 5.1 -811.8 -811816 1 ACTG1P17 GC15P083548 GC15P083560
GH15H082741 0.4 ENCODE 0.7 -2.6 -2556 1 SETDB1 AP3B2 FSD2 GOLGA6L9 ACTG1P17 ENSG00000259442
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ACTG1P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for ACTG1P17 Gene

Chromosome:
15
Start:
82,725,873 bp from pter
End:
82,739,780 bp from pter
Size:
13,908 bases
Orientation:
Minus strand

Genomic View for ACTG1P17 Gene

Genes around ACTG1P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTG1P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTG1P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTG1P17 Gene

Proteins for ACTG1P17 Gene

Post-translational modifications for ACTG1P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTG1P17 Gene

Domains & Families for ACTG1P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTG1P17 Gene

Function for ACTG1P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTG1P17 Gene

Localization for ACTG1P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACTG1P17 Gene

Pathways & Interactions for ACTG1P17 Gene

SuperPathways for ACTG1P17 Gene

No Data Available

Interacting Proteins for ACTG1P17 Gene

Gene Ontology (GO) - Biological Process for ACTG1P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTG1P17 Gene

Drugs & Compounds for ACTG1P17 Gene

No Compound Related Data Available

Transcripts for ACTG1P17 Gene

mRNA/cDNA for ACTG1P17 Gene

(11) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTG1P17 Gene

No ASD Table

Relevant External Links for ACTG1P17 Gene

GeneLoc Exon Structure for
ACTG1P17
ECgene alternative splicing isoforms for
ACTG1P17

Expression for ACTG1P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACTG1P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of ACTG1P17 Gene:

ACTG1P17
genes like me logo Genes that share expression patterns with ACTG1P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTG1P17 Gene

Orthologs for ACTG1P17 Gene

Evolution for ACTG1P17 Gene

ENSEMBL:
Gene Tree for ACTG1P17 (if available)
TreeFam:
Gene Tree for ACTG1P17 (if available)

No data available for Orthologs for ACTG1P17 Gene

Paralogs for ACTG1P17 Gene

No data available for Paralogs for ACTG1P17 Gene

Variants for ACTG1P17 Gene

Sequence variations from dbSNP and Humsavar for ACTG1P17 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000022938 -- 82,729,426(+) AGAAT(A/G)CATTT intron-variant
rs1000258466 -- 82,736,012(+) CATAA(A/T)AAATA intron-variant
rs1000321589 -- 82,727,610(+) CTTCC(A/G)CGTTC intron-variant
rs1000396021 -- 82,733,173(+) TTTTA(C/G)TACTT intron-variant
rs1000398449 -- 82,740,557(+) GGGAT(C/T)ACAGG upstream-variant-2KB

Relevant External Links for ACTG1P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTG1P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTG1P17 Gene

Disorders for ACTG1P17 Gene

Relevant External Links for ACTG1P17

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ACTG1P17

No disorders were found for ACTG1P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ACTG1P17 Gene

Publications for ACTG1P17 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ACTG1P17 Gene

Sources for ACTG1P17 Gene

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