Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ACTC1 Gene

Aliases for ACTC1 Gene

  • Actin, Alpha, Cardiac Muscle 1 2 3 5
  • ACTC 3 4
  • Actin, Alpha, Cardiac Muscle 2
  • Alpha-Cardiac Actin 4
  • CMD1R 3
  • CMH11 3
  • LVNC4 3
  • ASD5 3

External Ids for ACTC1 Gene

Previous HGNC Symbols for ACTC1 Gene

  • ACTC

Previous GeneCards Identifiers for ACTC1 Gene

  • GC15M032870
  • GC15M035080
  • GC15M011925

Summaries for ACTC1 Gene

Entrez Gene Summary for ACTC1 Gene

  • Actins are highly conserved proteins that are involved in various types of cell motility. Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. Each actin can bind to four others. The protein encoded by this gene belongs to the actin family which is comprised of three main groups of actin isoforms, alpha, beta, and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. Defects in this gene have been associated with idiopathic dilated cardiomyopathy (IDC) and familial hypertrophic cardiomyopathy (FHC). [provided by RefSeq, Jul 2008]

GeneCards Summary for ACTC1 Gene

ACTC1 (Actin, Alpha, Cardiac Muscle 1) is a Protein Coding gene. Diseases associated with ACTC1 include atrial septal defect 5 and cardiomyopathy, dilated, 1r. Among its related pathways are Development Slit-Robo signaling and Hypertrophic cardiomyopathy (HCM). GO annotations related to this gene include ATPase activity and myosin binding. An important paralog of this gene is ACTRT1.

UniProtKB/Swiss-Prot for ACTC1 Gene

  • Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Gene Wiki entry for ACTC1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTC1 Gene

Genomics for ACTC1 Gene

Regulatory Elements for ACTC1 Gene

Genomic Location for ACTC1 Gene

Chromosome:
15
Start:
34,788,096 bp from pter
End:
34,796,139 bp from pter
Size:
8,044 bases
Orientation:
Minus strand

Genomic View for ACTC1 Gene

Genes around ACTC1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTC1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTC1 Gene

Proteins for ACTC1 Gene

  • Protein details for ACTC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P68032-ACTC_HUMAN
    Recommended name:
    Actin, alpha cardiac muscle 1
    Protein Accession:
    P68032
    Secondary Accessions:
    • P04270

    Protein attributes for ACTC1 Gene

    Size:
    377 amino acids
    Molecular mass:
    42019 Da
    Quaternary structure:
    • Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. Each actin can bind to 4 others.
    Miscellaneous:
    • In vertebrates 3 main groups of actin isoforms, alpha, beta and gamma have been identified. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins coexist in most cell types as components of the cytoskeleton and as mediators of internal cell motility.

neXtProt entry for ACTC1 Gene

Proteomics data for ACTC1 Gene at MOPED

Post-translational modifications for ACTC1 Gene

  • (Microbial infection) Monomeric actin is cross-linked by V.cholerae toxins RtxA and VgrG1 in case of infection: bacterial toxins mediate the cross-link between Lys-52 of one monomer and Glu-272 of another actin monomer, resulting in formation of highly toxic actin oligomers that cause cell rounding (PubMed:19015515). The toxin can be highly efficient at very low concentrations by acting on formin homology family proteins: toxic actin oligomers bind with high affinity to formins and adversely affect both nucleation and elongation abilities of formins, causing their potent inhibition in both profilin-dependent and independent manners (PubMed:26228148).
  • Monomethylation at Lys-86 (K84me1) regulates actin-myosin interaction and actomyosin-dependent processes. Demethylation by ALKBH4 is required for maintaining actomyosin dynamics supporting normal cleavage furrow ingression during cytokinesis and cell migration.
  • Oxidation of Met-46 and Met-49 by MICALs (MICAL1, MICAL2 or MICAL3) to form methionine sulfoxide promotes actin filament depolymerization. MICAL1 and MICAL2 produce the (R)-S-oxide form. The (R)-S-oxide form is reverted by MSRB1 and MSRB2, which promote actin repolymerization (By similarity).
  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ACTC1 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

  • Cell Signaling Technology (CST) Antibodies for ACTC1 (ACTC1)

No data available for DME Specific Peptides for ACTC1 Gene

Domains & Families for ACTC1 Gene

Gene Families for ACTC1 Gene

HGNC:

Protein Domains for ACTC1 Gene

Suggested Antigen Peptide Sequences for ACTC1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P68032

UniProtKB/Swiss-Prot:

ACTC_HUMAN :
  • Belongs to the actin family.
Family:
  • Belongs to the actin family.
genes like me logo Genes that share domains with ACTC1: view

Function for ACTC1 Gene

Molecular function for ACTC1 Gene

UniProtKB/Swiss-Prot Function:
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
genes like me logo Genes that share phenotypes with ACTC1: view

Human Phenotype Ontology for ACTC1 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Models for ACTC1 Gene

MGI Knock Outs for ACTC1:

Animal Model Products

miRNA for ACTC1 Gene

miRTarBase miRNAs that target ACTC1

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Transcription Factor Targets and HOMER Transcription for ACTC1 Gene

Localization for ACTC1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ACTC1 Gene

Cytoplasm, cytoskeleton.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ACTC1 Gene COMPARTMENTS Subcellular localization image for ACTC1 gene
Compartment Confidence
cytoskeleton 5
cytosol 5
extracellular 5

Gene Ontology (GO) - Cellular Components for ACTC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA 20962418
GO:0005829 cytosol TAS --
GO:0005925 focal adhesion IDA 21423176
GO:0016020 membrane IDA 19946888
GO:0030027 lamellipodium ISS --
genes like me logo Genes that share ontologies with ACTC1: view

Pathways & Interactions for ACTC1 Gene

genes like me logo Genes that share pathways with ACTC1: view

Gene Ontology (GO) - Biological Process for ACTC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006915 apoptotic process ISS --
GO:0030048 actin filament-based movement IDA 16611632
GO:0030049 muscle filament sliding TAS --
GO:0030240 skeletal muscle thin filament assembly IEA,ISS --
GO:0042493 response to drug IEA --
genes like me logo Genes that share ontologies with ACTC1: view

No data available for SIGNOR curated interactions for ACTC1 Gene

Drugs & Compounds for ACTC1 Gene

(12) Drugs for ACTC1 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(21) Additional Compounds for ACTC1 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with ACTC1: view

Transcripts for ACTC1 Gene

mRNA/cDNA for ACTC1 Gene

Unigene Clusters for ACTC1 Gene

Actin, alpha, cardiac muscle 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ACTC1 Gene

No ASD Table

Relevant External Links for ACTC1 Gene

GeneLoc Exon Structure for
ACTC1
ECgene alternative splicing isoforms for
ACTC1

Expression for ACTC1 Gene

mRNA expression in normal human tissues for ACTC1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ACTC1 Gene

This gene is overexpressed in Heart - Left Ventricle (x24.8) and Heart - Atrial Appendage (x23.2).

Protein differential expression in normal tissues from HIPED for ACTC1 Gene

This gene is overexpressed in Heart (27.4), Saliva (9.2), Skin (8.2), and Brain (6.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for ACTC1 Gene



SOURCE GeneReport for Unigene cluster for ACTC1 Gene Hs.118127

genes like me logo Genes that share expression patterns with ACTC1: view

Protein tissue co-expression partners for ACTC1 Gene

Primer Products

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for ACTC1 Gene

Orthologs for ACTC1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ACTC1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ACTC1 35
  • 93.19 (n)
  • 100 (a)
ACTC1 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ACTC1 35
  • 92.4 (n)
  • 100 (a)
ACTC 36
  • 100 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Actc1 35
  • 92.4 (n)
  • 100 (a)
Actc1 16
Actc1 36
  • 100 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ACTC1 35
  • 99.65 (n)
  • 100 (a)
ACTC1 36
  • 100 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Actc1 35
  • 90.8 (n)
  • 100 (a)
oppossum
(Monodelphis domestica)
Mammalia ACTC1 36
  • 100 (a)
OneToOne
chicken
(Gallus gallus)
Aves ACTC1 35
  • 86.38 (n)
  • 100 (a)
ACTC1 36
  • 100 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ACTC1 36
  • 98 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia actc1 35
  • 88.68 (n)
  • 100 (a)
zebrafish
(Danio rerio)
Actinopterygii zgc:86709 35
  • 85.68 (n)
  • 99.73 (a)
acta1a 36
  • 99 (a)
ManyToMany
acta1b 36
  • 99 (a)
ManyToMany
actc1a 36
  • 99 (a)
ManyToMany
actc1b 36
  • 99 (a)
ManyToMany
hm:zewp0073 36
  • 99 (a)
ManyToMany
zgc:86709 36
  • 100 (a)
ManyToMany
thale cress
(Arabidopsis thaliana)
eudicotyledons ACT7 35
  • 75.86 (n)
  • 88.59 (a)
Alicante grape
(Vitis vinifera)
eudicotyledons Vvi.6704 35
rice
(Oryza sativa)
Liliopsida Os11g0163100 35
  • 78.07 (n)
  • 88.86 (a)
Species with no ortholog for ACTC1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ACTC1 Gene

ENSEMBL:
Gene Tree for ACTC1 (if available)
TreeFam:
Gene Tree for ACTC1 (if available)

Paralogs for ACTC1 Gene

genes like me logo Genes that share paralogs with ACTC1: view

Variants for ACTC1 Gene

Sequence variations from dbSNP and Humsavar for ACTC1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
VAR_012857 Cardiomyopathy, familial hypertrophic 11 (CMH11)
VAR_012858 Cardiomyopathy, familial hypertrophic 11 (CMH11)
VAR_012859 Cardiomyopathy, familial hypertrophic 11 (CMH11)
VAR_012860 Cardiomyopathy, dilated 1R (CMD1R)
VAR_012861 Cardiomyopathy, familial hypertrophic 11 (CMH11)

Structural Variations from Database of Genomic Variants (DGV) for ACTC1 Gene

Variant ID Type Subtype PubMed ID
nsv522411 CNV Gain 19592680
nsv457106 CNV Gain 19166990

Variation tolerance for ACTC1 Gene

Residual Variation Intolerance Score: 25% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.09; 1.95% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ACTC1 Gene

HapMap Linkage Disequilibrium report
ACTC1
Human Gene Mutation Database (HGMD)
ACTC1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ACTC1 Gene

Disorders for ACTC1 Gene

MalaCards: The human disease database

(67) MalaCards diseases for ACTC1 Gene - From: OMIM, GeneTests, Orphanet, Swiss-Prot, DISEASES, Novoseek, and GeneCards

Disorder Aliases PubMed IDs
atrial septal defect 5
  • asd5
cardiomyopathy, dilated, 1r
  • left ventricular noncompaction 4
cardiomyopathy, hypertrophic, 11
  • cardiomyopathy, familial hypertrophic, 11
patent foramen ovale
  • atrial septal defect within oval fossa
actc1-related dilated cardiomyopathy
  • cardiomyopathy, dilated, 1r
- elite association - COSMIC cancer census association via MalaCards
Search ACTC1 in MalaCards View complete list of genes associated with diseases

UniProtKB/Swiss-Prot

ACTC_HUMAN
  • Atrial septal defect 5 (ASD5) [MIM:612794]: A congenital heart malformation characterized by incomplete closure of the wall between the atria resulting in blood flow from the left to the right atria. {ECO:0000269 PubMed:17947298}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • Cardiomyopathy, dilated 1R (CMD1R) [MIM:613424]: A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. {ECO:0000269 PubMed:9563954}. Note=The disease is caused by mutations affecting the gene represented in this entry.
  • Cardiomyopathy, familial hypertrophic 11 (CMH11) [MIM:612098]: A hereditary heart disorder characterized by ventricular hypertrophy, which is usually asymmetric and often involves the interventricular septum. The symptoms include dyspnea, syncope, collapse, palpitations, and chest pain. They can be readily provoked by exercise. The disorder has inter- and intrafamilial variability ranging from benign to malignant forms with high risk of cardiac failure and sudden cardiac death. {ECO:0000269 PubMed:10330430, ECO:0000269 PubMed:10966831, ECO:0000269 PubMed:14729850, ECO:0000269 PubMed:18403758}. Note=The disease is caused by mutations affecting the gene represented in this entry.

Relevant External Links for ACTC1

Genetic Association Database (GAD)
ACTC1
Human Genome Epidemiology (HuGE) Navigator
ACTC1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ACTC1
genes like me logo Genes that share disorders with ACTC1: view

No data available for Genatlas for ACTC1 Gene

Publications for ACTC1 Gene

  1. Shared genetic causes of cardiac hypertrophy in children and adults. (PMID: 18403758) Morita H. … Seidman C.E. (N. Engl. J. Med. 2008) 3 4 48 67
  2. Prevalence of sarcomere protein gene mutations in preadolescent children with hypertrophic cardiomyopathy. (PMID: 20031618) Kaski J.P. … Elliott P.M. (Circ Cardiovasc Genet 2009) 3 23
  3. Alpha-cardiac actin mutations produce atrial septal defects. (PMID: 17947298) Matsson H. … Dahl N. (Hum. Mol. Genet. 2008) 3 23
  4. Dual roles of Gln137 of actin revealed by recombinant human cardiac muscle alpha-actin mutants. (PMID: 18515362) Iwasa M. … Oda T. (J. Biol. Chem. 2008) 3 23
  5. Mutations in sarcomere protein genes in left ventricular noncompaction. (PMID: 18506004) Klaassen S. … Thierfelder L. (Circulation 2008) 3 23

Products for ACTC1 Gene

Sources for ACTC1 Gene

Back to Top

Content