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Aliases for ACTBP9 Gene

Aliases for ACTBP9 Gene

  • Actin, Beta Pseudogene 9 2 3 5

External Ids for ACTBP9 Gene

Previous GeneCards Identifiers for ACTBP9 Gene

  • GC18U990002
  • GC18P060109

Summaries for ACTBP9 Gene

GeneCards Summary for ACTBP9 Gene

ACTBP9 (Actin, Beta Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTBP9 Gene

Genomics for ACTBP9 Gene

Regulatory Elements for ACTBP9 Gene

Enhancers for ACTBP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18F062435 0.8 Ensembl ENCODE 0.8 -4.5 -4451 3.3 TBP PKNOX1 SAP130 ZNF133 EBF1 RAD21 TEAD3 YY1 E2F1 POLR2A ZCCHC2 ACTBP9 ENSG00000267487
GH18F062449 1.4 FANTOM5 Ensembl ENCODE 0.4 +10.1 10122 4.5 PKNOX1 ARID4B SIN3A DMAP1 YY1 SLC30A9 FOS KLF13 SP5 KAT8 ZCCHC2 KIAA1468 ACTBP9 GC18P062511
GH18F062458 0.6 Ensembl ENCODE 0.3 +18.5 18483 3.8 ATF1 MLX ARID4B YY1 SLC30A9 SP5 NFYC MXD4 MIER2 PPARG ZCCHC2 ACTBP9 GC18P062511
GH18F062425 0.9 Ensembl ENCODE 0.3 -15.9 -15924 2.0 ATF1 ZNF133 ARID4B YY1 ZNF766 FOS DEK REST PPARG KAT8 ENSG00000267487 ACTBP9
GH18F062423 0.2 ENCODE 0.3 -18.6 -18612 0.1 CTCF ZNF654 ZFP37 TRIM22 ZNF644 RAD21 ZNF692 SMC3 SP7 ENSG00000267487 ACTBP9
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ACTBP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for ACTBP9 Gene

Chromosome:
18
Start:
62,441,924 bp from pter
End:
62,443,715 bp from pter
Size:
1,792 bases
Orientation:
Plus strand

Genomic View for ACTBP9 Gene

Genes around ACTBP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACTBP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACTBP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTBP9 Gene

Proteins for ACTBP9 Gene

Post-translational modifications for ACTBP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTBP9 Gene

Domains & Families for ACTBP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTBP9 Gene

Function for ACTBP9 Gene

Molecular function for ACTBP9 Gene

GENATLAS Biochemistry:
actin,beta,pseudogene 9

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACTBP9 Gene

Localization for ACTBP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACTBP9 Gene

Pathways & Interactions for ACTBP9 Gene

SuperPathways for ACTBP9 Gene

No Data Available

Interacting Proteins for ACTBP9 Gene

Gene Ontology (GO) - Biological Process for ACTBP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACTBP9 Gene

Transcripts for ACTBP9 Gene

mRNA/cDNA for ACTBP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACTBP9 Gene

No ASD Table

Relevant External Links for ACTBP9 Gene

GeneLoc Exon Structure for
ACTBP9
ECgene alternative splicing isoforms for
ACTBP9

Expression for ACTBP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ACTBP9 Gene

mRNA differential expression in normal tissues according to GTEx for ACTBP9 Gene

This gene is overexpressed in Liver (x38.9) and Colon - Transverse (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of ACTBP9 Gene:

ACTBP9
genes like me logo Genes that share expression patterns with ACTBP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ACTBP9 Gene

Orthologs for ACTBP9 Gene

Evolution for ACTBP9 Gene

ENSEMBL:
Gene Tree for ACTBP9 (if available)
TreeFam:
Gene Tree for ACTBP9 (if available)

No data available for Orthologs for ACTBP9 Gene

Paralogs for ACTBP9 Gene

No data available for Paralogs for ACTBP9 Gene

Variants for ACTBP9 Gene

Relevant External Links for ACTBP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACTBP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACTBP9 Gene

Disorders for ACTBP9 Gene

No disorders were found for ACTBP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACTBP9 Gene

Publications for ACTBP9 Gene

  1. FISH localization of human cytoplasmic actin genes ACTB to 7p22 and ACTG1 to 17q25 and characterization of related pseudogenes. (PMID: 8941379) Ueyama H. … Miwa T. (Cytogenet. Cell Genet. 1996) 2 3 64

Products for ACTBP9 Gene

Sources for ACTBP9 Gene

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