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Aliases for ACTA2-AS1 Gene

Subcategory (RNA class) for ACTA2-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ACTA2-AS1 Gene

  • ACTA2 Antisense RNA 1 2 3
  • Uc001kfo.1 3
  • ZXF1 3

External Ids for ACTA2-AS1 Gene

ORGUL Members for ACTA2-AS1 Gene

Previous GeneCards Identifiers for ACTA2-AS1 Gene

  • GC10P090693

Summaries for ACTA2-AS1 Gene

GeneCards Summary for ACTA2-AS1 Gene

ACTA2-AS1 (ACTA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTA2-AS1 Gene

Genomics for ACTA2-AS1 Gene

Genomic Location for ACTA2-AS1 Gene

Start:
88,932,643 bp from pter
End:
88,940,611 bp from pter
Size:
7,969 bases
Orientation:
Plus strand

Genomic View for ACTA2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ACTA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTA2-AS1 Gene

No data available for Regulatory Elements for ACTA2-AS1 Gene

Proteins for ACTA2-AS1 Gene

Post-translational modifications for ACTA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTA2-AS1 Gene

Domains for ACTA2-AS1 Gene

Gene Families for ACTA2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ACTA2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTA2-AS1 Gene

Function for ACTA2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ACTA2-AS1 Gene

Localization for ACTA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACTA2-AS1 Gene

Pathways for ACTA2-AS1 Gene

SuperPathways for ACTA2-AS1 Gene

No Data Available

Interacting Proteins for ACTA2-AS1 Gene

Gene Ontology (GO) - Biological Process for ACTA2-AS1 Gene

None

No data available for Pathways by source for ACTA2-AS1 Gene

Transcripts for ACTA2-AS1 Gene

mRNA/cDNA for ACTA2-AS1 Gene

(4) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ACTA2-AS1 Gene

ACTA2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ACTA2-AS1 Gene

No ASD Table

Relevant External Links for ACTA2-AS1 Gene

GeneLoc Exon Structure for
ACTA2-AS1
ECgene alternative splicing isoforms for
ACTA2-AS1

Expression for ACTA2-AS1 Gene

mRNA expression in normal human tissues for ACTA2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ACTA2-AS1 Gene

This gene is overexpressed in Artery - Tibial (7.0), Artery - Coronary (5.6), Artery - Aorta (5.5), and Esophagus - Gastroesophageal Junction (4.2).

SOURCE GeneReport for Unigene cluster for ACTA2-AS1 Gene Hs.713690

genes like me logo Genes that share expressions with ACTA2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ACTA2-AS1 Gene

Orthologs for ACTA2-AS1 Gene

Evolution for ACTA2-AS1 Gene

ENSEMBL:
Gene Tree for ACTA2-AS1 (if available)
TreeFam:
Gene Tree for ACTA2-AS1 (if available)

No data available for Orthologs for ACTA2-AS1 Gene

Paralogs for ACTA2-AS1 Gene

No data available for Paralogs for ACTA2-AS1 Gene

Variants for ACTA2-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACTA2-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs730755 -- 88,934,343(+) AAAGT(A/C)ATATC intron-variant
rs762553 -- 88,934,119(-) ATTCA(C/G)GCCAG intron-variant
rs1372325 -- 88,933,812(-) AGCTG(A/G)GAGCT nc-transcript-variant
rs4934430 -- 88,931,655(+) GTTCC(A/G)TCCAG upstream-variant-2KB
rs6586158 -- 88,934,522(+) GAGCC(C/T)AGAAG intron-variant

Relevant External Links for ACTA2-AS1 Gene

HapMap Linkage Disequilibrium report
ACTA2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ACTA2-AS1 Gene

Disorders for ACTA2-AS1 Gene

No disorders were found for ACTA2-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for ACTA2-AS1 Gene

Publications for ACTA2-AS1 Gene

  1. Enhanced expression of long non-coding RNA ZXF1 promoted the invasion and metastasis in lung adenocarcinoma. (PMID: 24721325) Zhang L. … Zhao J.P. (Biomed. Pharmacother. 2014) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for ACTA2-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ACTA2-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ACTA2-AS1
    • Block miRNA regulation of ACTA2-AS1 using miScript Target Protectors

    Sources for ACTA2-AS1 Gene

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