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Aliases for ACTA2-AS1 Gene

Subcategory (RNA class) for ACTA2-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ACTA2-AS1 Gene

  • ACTA2 Antisense RNA 1 2 3
  • Uc001kfo.1 3
  • ZXF1 3

External Ids for ACTA2-AS1 Gene

ORGUL Members for ACTA2-AS1 Gene

Previous GeneCards Identifiers for ACTA2-AS1 Gene

  • GC10P090693

Summaries for ACTA2-AS1 Gene

GeneCards Summary for ACTA2-AS1 Gene

ACTA2-AS1 (ACTA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTA2-AS1 Gene

Genomics for ACTA2-AS1 Gene

Genomic Location for ACTA2-AS1 Gene

Start:
88,932,643 bp from pter
End:
88,940,611 bp from pter
Size:
7,969 bases
Orientation:
Plus strand

Genomic View for ACTA2-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ACTA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACTA2-AS1 Gene

No data available for Regulatory Elements for ACTA2-AS1 Gene

Proteins for ACTA2-AS1 Gene

Post-translational modifications for ACTA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACTA2-AS1 Gene

Domains for ACTA2-AS1 Gene

Gene Families for ACTA2-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ACTA2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACTA2-AS1 Gene

Function for ACTA2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ACTA2-AS1 Gene

Localization for ACTA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACTA2-AS1 Gene

Pathways for ACTA2-AS1 Gene

SuperPathways for ACTA2-AS1 Gene

No Data Available

Interacting Proteins for ACTA2-AS1 Gene

Gene Ontology (GO) - Biological Process for ACTA2-AS1 Gene

None

No data available for Pathways by source for ACTA2-AS1 Gene

Transcripts for ACTA2-AS1 Gene

mRNA/cDNA for ACTA2-AS1 Gene

(4) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ACTA2-AS1 Gene

ACTA2 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ACTA2-AS1
    • Block miRNA regulation of ACTA2-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ACTA2-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ACTA2-AS1 Gene

    No ASD Table

    Relevant External Links for ACTA2-AS1 Gene

    GeneLoc Exon Structure for
    ACTA2-AS1
    ECgene alternative splicing isoforms for
    ACTA2-AS1

    Expression for ACTA2-AS1 Gene

    mRNA expression in normal human tissues for ACTA2-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for ACTA2-AS1 Gene

    This gene is overexpressed in Artery - Tibial (7.0), Artery - Coronary (5.6), Artery - Aorta (5.5), and Esophagus - Gastroesophageal Junction (4.2).

    SOURCE GeneReport for Unigene cluster for ACTA2-AS1 Gene Hs.713690

    genes like me logo Genes that share expressions with ACTA2-AS1: view

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for ACTA2-AS1 Gene

    Orthologs for ACTA2-AS1 Gene

    Evolution for ACTA2-AS1 Gene

    ENSEMBL:
    Gene Tree for ACTA2-AS1 (if available)
    TreeFam:
    Gene Tree for ACTA2-AS1 (if available)

    No data available for Orthologs for ACTA2-AS1 Gene

    Paralogs for ACTA2-AS1 Gene

    No data available for Paralogs for ACTA2-AS1 Gene

    Variants for ACTA2-AS1 Gene

    Sequence variations from dbSNP and Humsavar for ACTA2-AS1 Gene

    SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
    rs730755 -- 88,934,343(+) AAAGT(A/C)ATATC intron-variant
    rs762553 -- 88,934,119(-) ATTCA(C/G)GCCAG intron-variant
    rs1372325 -- 88,933,812(-) AGCTG(A/G)GAGCT nc-transcript-variant
    rs4934430 -- 88,931,655(+) GTTCC(A/G)TCCAG upstream-variant-2KB
    rs6586158 -- 88,934,522(+) GAGCC(C/T)AGAAG intron-variant

    Relevant External Links for ACTA2-AS1 Gene

    HapMap Linkage Disequilibrium report
    ACTA2-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ACTA2-AS1 Gene

    Disorders for ACTA2-AS1 Gene

    No disorders were found for ACTA2-AS1 Gene.

    No data available for UniProtKB/Swiss-Prot for ACTA2-AS1 Gene

    Publications for ACTA2-AS1 Gene

    1. Enhanced expression of long non-coding RNA ZXF1 promoted the invasion and metastasis in lung adenocarcinoma. (PMID: 24721325) Zhang L. … Zhao J.P. (Biomed. Pharmacother. 2014) 2 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

    Products for ACTA2-AS1 Gene

    • QIAGEN qRT-PCR Assays for microRNAs that regulate ACTA2-AS1
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for ACTA2-AS1
      • Block miRNA regulation of ACTA2-AS1 using miScript Target Protectors

      Sources for ACTA2-AS1 Gene

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