Aliases for ACTA2 Gene
Aliases for ACTA2 Gene
External Ids for ACTA2 Gene
- HGNC: 130
- Entrez Gene: 59
- Ensembl: ENSG00000107796
- OMIM: 102620
- UniProtKB: P62736
Previous GeneCards Identifiers for ACTA2 Gene
- GC10M089576
- GC10M089916
- GC10M090826
- GC10M090359
- GC10M090684
- GC10M084329
Summaries for ACTA2 Gene
-
The protein encoded by this gene belongs to the actin family of proteins, which are highly conserved proteins that play a role in cell motility, structure and integrity. Alpha, beta and gamma actin isoforms have been identified, with alpha actins being a major constituent of the contractile apparatus, while beta and gamma actins are involved in the regulation of cell motility. This actin is an alpha actin that is found in skeletal muscle. Defects in this gene cause aortic aneurysm familial thoracic type 6. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2008]
GeneCards Summary for ACTA2 Gene
ACTA2 (Actin, Alpha 2, Smooth Muscle, Aorta) is a Protein Coding gene. Diseases associated with ACTA2 include Multisystemic Smooth Muscle Dysfunction Syndrome and Moyamoya Disease 5. Among its related pathways are ICos-ICosL Pathway in T-Helper Cell and GPCR Pathway. GO annotations related to this gene include protein kinase binding. An important paralog of this gene is ACTG2.
UniProtKB/Swiss-Prot for ACTA2 Gene
-
Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
-
Actin is a ubiquitous globular protein that is one of the most highly-conserved proteins known. It is found in two main states: G-actin is the globular monomeric form, whereas F-actin forms helical polymers. Both G- and F-actin are intrinsically flexible structures.
No data available for CIViC summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACTA2 Gene
Genomics for ACTA2 Gene
Regulatory Elements for ACTA2 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH10G088988 | 1.6 | Ensembl ENCODE dbSUPER | 27.4 | -1.9 | -1853 | 8.6 | HDGF PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF207 ZNF143 | FAS ACTA2 ACTA2-AS1 CH25H FAS-AS1 GC10M088853 |
| GH10G089355 | 1.1 | ENCODE dbSUPER | 19 | -364.3 | -364269 | 0.2 | DDX20 BACH1 ZNF175 CEBPG FOSL1 IRF9 ZNF766 NR2F6 ZNF584 ZNF639 | ACTA2 IFIT1B ENSG00000232110 IFIT3 IFIT1 IFIT6P LOC101926887 |
| GH10G088986 | 0.9 | ENCODE dbSUPER | 22.9 | +4.5 | 4532 | 0.2 | HDGF CTCF PKNOX1 ZBED1 TRIM22 MAX YBX1 REST RAD21 EGR1 | ACTA2 FAS |
| GH10G088987 | 0.8 | Ensembl ENCODE | 22 | +3.8 | 3790 | 0.4 | CBFB EED IKZF1 TRIM22 RELB ETV6 IKZF2 | ACTA2 FAS |
| GH10G089030 | 1.1 | Ensembl ENCODE | 11.2 | -40.7 | -40716 | 2.2 | RFX5 GATA2 SCRT2 FOS RELB DEK CEBPB TBX21 MAFF CBX8 | FAS CH25H ACTA2-AS1 ACTA2 GC10P089027 MIR4679-1 |
- Transcription factor binding sites by QIAGEN in the ACTA2 gene promoter:
Regulatory Element Products
Genomic Location for ACTA2 Gene
- Chromosome:
- 10
- Start:
- 88,935,074 bp from pter
- End:
- 88,991,390 bp from pter
- Size:
- 56,317 bases
- Orientation:
- Minus strand
Genomic View for ACTA2 Gene
- Cytogenetic band:
-
- 10q23.31 by Ensembl
- 10q23.31 by Entrez Gene
- 10q23.31 by HGNC
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ACTA2 Gene
Proteins for ACTA2 Gene
-
Protein details for ACTA2 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P62736-ACTA_HUMAN
- Recommended name:
- Actin, aortic smooth muscle
- Protein Accession:
- P62736
- B2R8A4
- P03996
- P04108
- Q6FI19
Protein attributes for ACTA2 Gene
- Size:
- 377 amino acids
- Molecular mass:
- 42009 Da
- Quaternary structure:
-
- Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. Each actin can bind to 4 others.
- Miscellaneous:
-
- In vertebrates 3 main groups of actin isoforms, alpha, beta and gamma have been identified. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins coexist in most cell types as components of the cytoskeleton and as mediators of internal cell motility.
Protein Expression for ACTA2 Gene
Post-translational modifications for ACTA2 Gene
- (Microbial infection) Monomeric actin is cross-linked by V.cholerae toxins RtxA and VgrG1 in case of infection: bacterial toxins mediate the cross-link between Lys-52 of one monomer and Glu-272 of another actin monomer, resulting in formation of highly toxic actin oligomers that cause cell rounding (PubMed:19015515). The toxin can be highly efficient at very low concentrations by acting on formin homology family proteins: toxic actin oligomers bind with high affinity to formins and adversely affect both nucleation and elongation abilities of formins, causing their potent inhibition in both profilin-dependent and independent manners (PubMed:26228148).
- Monomethylation at Lys-86 (K84me1) regulates actin-myosin interaction and actomyosin-dependent processes. Demethylation by ALKBH4 is required for maintaining actomyosin dynamics supporting normal cleavage furrow ingression during cytokinesis and cell migration.
- Oxidation of Met-46 and Met-49 by MICALs (MICAL1, MICAL2 or MICAL3) to form methionine sulfoxide promotes actin filament depolymerization. MICAL1 and MICAL2 produce the (R)-S-oxide form. The (R)-S-oxide form is reverted by MSRB1 and MSRB2, which promote actin repolymerization (By similarity).
- Modification sites at PhosphoSitePlus
- Modification sites at neXtProt
Other Protein References for ACTA2 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
Antibody Products
- EMD Millipore top ACTA2 Antibody
- EMD Millipore Complete listing of Mono and Polychlonal Antibodies for ACTA2
- R&D Systems Antibodies for ACTA2 (alpha-Smooth Muscle Actin)
- Cell Signaling Technology (CST) Antibodies for ACTA2 (ACTA2)
-
Custom Antibody ServicesOriGene Antibodies for ACTA2
- TA353561
- TA353562
- TA353560
- TA350958
- TA347823
- TA332577
- TA327604
- TA323891
- TA302403
- DM001-05
- DM001
- AP31046PU-N
- AP23627PU-N
- AP23031PU-N
- AP15474PU-S
- AP15474PU-N
- AP15335PU-S
- AP15335PU-N
- AP15335PU-M
- AP08847PU-N
- AP07127PU-N
- AM50166PU-T
- AM50166PU-S
- AM50166PU-N
- AM32432PU-S
- AM32432PU-N
- AM32432PU-M
- AM31714PU-N
- AM11086PU-S
- AM11086PU-N
- AM11086PU-M
- AM10020PU-S
- AM10020PU-N
- AM06647SU-N
- AM06575SU-N
- AM06574SU-N
- TA354078
- Novus Biologicals Antibodies for ACTA2
- Invitrogen Antibodies for ACTA2
- antibodies-online Antibodies for ACTA2: See all 214
- GeneTex ACTA2 antibody for ACTA2
-
Santa Cruz Biotechnology (SCBT) Antibodies for ACTA2
Protein Products
-
OriGene Purified Proteins for ACTA2
- Search Origene for MassSpec and Protein Over-expression Lysates for ACTA2
- Origene Custom Protein Services for ACTA2
- ProSpec Recombinant Proteins for ACTA2
- antibodies-online Proteins for ACTA2: See all 11
- Search antibodies-online for peptides
- Search GeneTex for Proteins for ACTA2
Assay Products
- antibodies-online Kits for ACTA2: See all 16
No data available for DME Specific Peptides for ACTA2 Gene
Domains & Families for ACTA2 Gene
Gene Families for ACTA2 Gene
- HGNC:
Protein Domains for ACTA2 Gene
- InterPro:
- ProtoNet:
Suggested Antigen Peptide Sequences for ACTA2 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
P62736- Family:
-
- Belongs to the actin family.
Function for ACTA2 Gene
Molecular function for ACTA2 Gene
- GENATLAS Biochemistry:
- actin,alpha 2,smooth muscle,aorta,major constituent of thin filaments
- UniProtKB/Swiss-Prot Function:
- Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
- UniProtKB/Swiss-Prot Induction:
- Up-regulated in response to enterovirus 71 (EV71) infection.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | -- |
| GO:0019901 | protein kinase binding | ISS | -- |
Phenotypes for ACTA2 Gene
- MGI mutant phenotypes for ACTA2:
- inferred from 1 alleles
- GenomeRNAi human phenotypes for ACTA2:
Animal Models for ACTA2 Gene
- MGI Knock Outs for ACTA2:
-
- Acta2 tm1Rjs
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ACTA2
-
-
ViGene Biosciences lentiviral particle packaged cDNA for ACTA2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for ACTA2 gene
- Search ViGene Biosciences for ACTA2
CRISPR Products
-
OriGene CRISPR knockouts for ACTA2
-
Santa Cruz Biotechnology (SCBT) CRISPR for ACTA2
- GenScript: Design CRISPR guide RNA sequences for ACTA2
miRNA for ACTA2 Gene
- miRTarBase miRNAs that target ACTA2
miRNA Products
- Search ViGene Biosciences for ACTA2
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for ACTA2
- Browse OriGene Inhibitory RNA Products For ACTA2
-
ViGene Biosciences ready-to-package AAV shRNAs for ACTA2 gene
Clone Products
- Sino Biological Human cDNA Clone for ACTA2
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- Addgene plasmids for ACTA2
- VectorBuilder custom plasmid, inducible vectors for ACTA2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ACTA2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Cell Line Products
- ESI BIO PureStem Z11, Meso Progenitor for ACTA2
-
Horizon Cell Lines for ACTA2
-
ViGene Biosciences adenoviral particle packaged cDNA for ACTA2 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for ACTA2 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for ACTA2 gene
Flow Cytometry Products
- eBioscience FlowRNA Probe Sets (VA1-10300 VA6-13283) for ACTA2
No data available for Enzyme Numbers (IUBMB) , Transcription Factor Targets and HOMER Transcription for ACTA2 Gene
Localization for ACTA2 Gene
Subcellular locations from UniProtKB/Swiss-Prot for ACTA2 Gene
- Cytoplasm, cytoskeleton.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005615 | extracellular space | IDA | 23580065 |
| GO:0005737 | cytoplasm | IDA | 11927518 |
| GO:0005829 | cytosol | TAS | -- |
| GO:0005856 | cytoskeleton | IEA | -- |
| GO:0015629 | actin cytoskeleton | IEA | -- |
Pathways & Interactions for ACTA2 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Actin Nucleation by ARP-WASP Complex |
.41
.35
|
|
| 2 | PAK Pathway |
.56
|
|
| 3 | VEGF Pathway (Qiagen) |
.66
|
|
| 4 | fMLP Pathway |
.43
|
|
| 5 | Sertoli-Sertoli Cell Junction Dynamics | ||
Pathways by source for ACTA2 Gene
1 Cell Signaling Technology pathway for ACTA2 Gene
2 BioSystems pathways for ACTA2 Gene
2 Reactome pathways for ACTA2 Gene
2 KEGG pathways for ACTA2 Gene
8 GeneGo (Thomson Reuters) pathways for ACTA2 Gene
1 R&D Systems pathway for ACTA2 Gene
Interacting Proteins for ACTA2 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006936 | muscle contraction | TAS | -- |
| GO:0008217 | regulation of blood pressure | IEA | -- |
| GO:0009615 | response to virus | IEP | 16548883 |
| GO:0010628 | positive regulation of gene expression | ISS | -- |
| GO:0014829 | vascular smooth muscle contraction | IEA | -- |
Drugs & Compounds for ACTA2 Gene
| Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
|---|---|---|---|---|---|---|
| Latrunculin A | Experimental | Pharma | Inhibitor of actin assembly and polymerization | 0 | ||
| Cytochalasin D | Pharma | inhibitor of actin polymerization, selective, Disrupts actin filament function | 0 | |||
| Jasplakinolide | Pharma | Stabilizes F-actin; promotes actin polymerization | 0 | |||
| CK 666 | Pharma | 0 | ||||
| CK 869 | Pharma | 0 |
| Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs | |
|---|---|---|---|---|---|---|
| Cytochalasin B |
|
14930-96-2 |
|
|
||
| Thymosin beta4 |
|
77591-33-4 |
|
|
(5) Tocris Compounds for ACTA2 Gene
| Compound | Action | Cas Number |
|---|---|---|
| Cytochalasin B | Inhibitor of actin polymerization | 14930-96-2 |
| Cytochalasin D | Disrupts actin filament function | 22144-77-0 |
| Jasplakinolide | Stabilizes F-actin; promotes actin polymerization | 102396-24-7 |
| Latrunculin A | Inhibitor of actin assembly and polymerization | 76343-93-6 |
| Thymosin beta4 | Potent actin polymerization regulator | 77591-33-4 |
(8) ApexBio Compounds for ACTA2 Gene
| Compound | Action | Cas Number |
|---|---|---|
| CK 666 | 442633-00-3 | |
| CK 869 | 388592-44-7 | |
| Cytochalasin D | inhibitor of actin polymerization, selective | 22144-77-0 |
| Jasplakinolide | 102396-24-7 | |
| Latrunculin A | 76343-93-6 | |
| Phalloidin | 17466-45-4 | |
| SMIFH2 | 340316-62-3 | |
| Wiskostatin | 253449-04-6 |
Drug Products
- ApexBio compounds for ACTA2
Transcripts for ACTA2 Gene
mRNA/cDNA for ACTA2 Gene
- (3) REFSEQ mRNAs :
- (12) Additional mRNA sequences :
- (1088) Selected AceView cDNA sequences:
- (6) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for ACTA2 Gene
CRISPR Products
-
OriGene CRISPR knockouts for ACTA2
-
Santa Cruz Biotechnology (SCBT) CRISPR for ACTA2
- GenScript: Design CRISPR guide RNA sequences for ACTA2
miRNA Products
- Search ViGene Biosciences for ACTA2
Inhibitory RNA Products
- Origene RNAi, siRNA, and shRNA products in human, mouse, rat for ACTA2
- Browse OriGene Inhibitory RNA Products For ACTA2
-
ViGene Biosciences ready-to-package AAV shRNAs for ACTA2 gene
Clone Products
- Sino Biological Human cDNA Clone for ACTA2
- Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat
- Addgene plasmids for ACTA2
- VectorBuilder custom plasmid, inducible vectors for ACTA2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for ACTA2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Flow Cytometry Products
- eBioscience FlowRNA Probe Sets (VA1-10300 VA6-13283) for ACTA2
Expression for ACTA2 Gene
mRNA expression in embryonic tissues and stem cells from LifeMap Discovery
-
Smooth Muscle (Muscoskeletal System)
- Smooth Muscle Cells Prechordal Mesenchyme
- Vascular Smooth Muscle Cells Splanchnic Mesoderm
- Airway Smooth Muscle Cells Trachea
- Vascular Smooth Muscle Cells Veins
- Vascular Smooth Muscle Cells Dorsal Aorta
- Mesenchymal Stem Cells
-
Heart (Cardiovascular System)
- Primitive Heart Tube Cells Primitive Heart Tube
- Vascular Smooth Muscle Cells Dorsal Aorta
- Vascular Smooth Muscle Cells Coronary Capillary Plexus
- Vascular Smooth Muscle Cells Aortic Arch Arteries
- Vascular Smooth Muscle Cells Coronary Vessels
- Umbilical Cord (Extraembryonic Tissues)
-
Endothelium (Cardiovascular System)
- Mesenchymal Stem Cells Microvessels
- Pericytes Microvessels
- Vascular Smooth Muscle Cells Veins
- Extraembryonic Angioblasts Extraembryonic Capillary Plexus
- Adult Endothelial Cells Blood Brain Barrier
- Bone (Muscoskeletal System)
- Epithelial Cells
- Cartilage (Muscoskeletal System)
- NULL (Uncategorized)
-
Skeletal Muscle (Muscoskeletal System)
- Mononuclear Myocytes Hyoid Arch Muscles
- Multinuclear Myocyte Extraocular Muscles
- Mononuclear Myocytes Mandibular Arch Muscles
- Inner Cell Mass (Early Embryonic Tissues)
-
Ovary (Reproductive System)
- Pre-Granulosa Cells Primordial Follicle
- Granulosa Cells Primary Follicle
-
Tooth (Integumentary System)
- Dental Placode Cells Dental Placode
- Dental Pulp Stem Cells Dental Pulp
-
Liver (Hepatobiliary System)
- Pericytes Sinusoids
- Adult liver progenitor cells
-
Lateral Plate Mesoderm (Gastrulation Derivatives)
- Vascular Smooth Muscle Cells Splanchnic Mesoderm
- PureStem E15, Meso-prx/latp Progenitor
-
Testis (Reproductive System)
- Peritubular Myoid Cells Testis Cord
- Testicular Interstitial Cells Testis Interstitium
-
Gonad
- Peritubular Myoid Cells Testis Cord
- Primordial Germ Cells Primitive Gonad
- Lung (Respiratory System)
-
Brain (Nervous System)
- Pericytes Blood Brain Barrier
- Adult Endothelial Cells Blood Brain Barrier
- Placenta (Extraembryonic Tissues)
- Blood (Hematopoietic System)
-
Head Mesenchyme (Muscoskeletal System)
- Smooth Muscle Cells Prechordal Mesenchyme
-
Extraembryonic Mesoderm (Extraembryonic Tissues)
- Extraembryonic Angioblasts Extraembryonic Capillary Plexus
-
Kidney (Urinary System)
- Vascular Smooth Muscle Cells Afferent Arteriole
- Colon (Gastrointestinal Tract)
- Gut Tube (Gastrointestinal Tract)
- Intestine (Gastrointestinal Tract)
- Dermis (Integumentary System)
- Fibroblasts
- Paraxial Mesoderm (Gastrulation Derivatives)
- Breast (Uncategorized)
- Hair (Integumentary System)
-
Uterus (Reproductive System)
-
Prostate (Endocrine System)
-
Spleen (Hematopoietic System)
-
Thyroid (Endocrine System)
-
Gall Bladder (Hepatobiliary System)
-
Adrenal Gland (Endocrine System)
-
Esophagus (Gastrointestinal Tract)
-
Stomach (Gastrointestinal Tract)
-
Adipose (Muscoskeletal System)
mRNA differential expression in normal tissues according to GTEx for ACTA2 Gene
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for ACTA2 Gene
NURSA nuclear receptor signaling pathways regulating expression of ACTA2 Gene:
ACTA2SOURCE GeneReport for Unigene cluster for ACTA2 Gene:
Hs.500483Evidence on tissue expression from TISSUES for ACTA2 Gene
- Muscle(4.7)
- Lung(4.6)
- Nervous system(4.5)
- Intestine(4.3)
- Pancreas(4.2)
- Stomach(4.2)
- Eye(4.1)
- Kidney(3.6)
- Heart(3.5)
- Liver(3.4)
- Skin(3.2)
- Spleen(2.8)
- Gall bladder(2.7)
- Adrenal gland(2.1)
- Bone(2)
- Lymph node(2)
Phenotype-based relationships between genes and organs from Gene ORGANizer for ACTA2 Gene
- ectoderm
- endoderm
- mesoderm
- cardiovascular
- digestive
- immune
- integumentary
- nervous
- reproductive
- respiratory
- skeletal muscle
- skeleton
- brain
- chin
- cranial nerve
- ear
- eye
- eyelid
- face
- head
- jaw
- mandible
- maxilla
- meninges
- mouth
- pharynx
- skull
- aorta
- chest wall
- diaphragm
- esophagus
- heart
- heart valve
- lung
- rib
- rib cage
- sternum
- abdominal wall
- appendix
- biliary tract
- duodenum
- intestine
- large intestine
- pancreas
- small intestine
- stomach
- pelvis
- rectum
- testicle
- ankle
- digit
- elbow
- finger
- foot
- hand
- hip
- knee
- lower limb
- shoulder
- toe
- upper limb
- wrist
- blood
- blood vessel
- peripheral nerve
- peripheral nervous system
- skin
- spinal column
- vertebrae
Primer Products
-
OriGene qPCR primer pairs for ACTA2
-
OriGene qPCR primer pairs and template standards for ACTA2
No data available for mRNA Expression by UniProt/SwissProt for ACTA2 Gene
Orthologs for ACTA2 Gene
This gene was present in the common ancestor of eukaryotes.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| dog (Canis familiaris) |
Mammalia | ACTC 35 |
|
OneToOne | |
| ACTA2 34 |
|
||||
| platypus (Ornithorhynchus anatinus) |
Mammalia | ACTA2 35 |
|
OneToOne | |
| chimpanzee (Pan troglodytes) |
Mammalia | ACTA2 34 |
|
||
| oppossum (Monodelphis domestica) |
Mammalia | ACTA2 35 |
|
OneToOne | |
| cow (Bos Taurus) |
Mammalia | ACTA2 34 35 |
|
||
| mouse (Mus musculus) |
Mammalia | Acta2 34 16 35 |
|
||
| rat (Rattus norvegicus) |
Mammalia | Acta2 34 |
|
||
| chicken (Gallus gallus) |
Aves | ACTG2 35 |
|
ManyToMany | |
| ACTA2 34 |
|
||||
| lizard (Anolis carolinensis) |
Reptilia | -- 35 |
|
ManyToMany | |
| -- 35 |
|
ManyToMany | |||
| tropical clawed frog (Silurana tropicalis) |
Amphibia | MGC75582 34 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | acta2 35 |
|
OneToMany | |
| acta1a 34 |
|
||||
| fruit fly (Drosophila melanogaster) |
Insecta | Act5C 36 |
|
|
|
| Act42A 36 |
|
|
|||
| Act57B 36 |
|
|
|||
| Act79B 36 |
|
|
|||
| Act87E 36 |
|
|
|||
| Act88F 36 |
|
|
|||
| Arp53D 36 |
|
|
|||
| worm (Caenorhabditis elegans) |
Secernentea | act-2 36 |
|
|
|
| act-1 36 |
|
|
|||
| act-3 36 |
|
|
|||
| act-5 36 |
|
|
|||
| F42C5.9 36 |
|
|
|||
| soybean (Glycine max) |
eudicotyledons | Gma.1913 34 |
|
||
| rice (Oryza sativa) |
Liliopsida | Os12g0163700 34 |
|
- Species where no ortholog for ACTA2 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
Paralogs for ACTA2 Gene
Paralogs for ACTA2 Gene
(33) SIMAP similar genes for ACTA2 Gene using alignment to 5 proteins:
Pseudogenes.org Pseudogenes for ACTA2 Gene
Variants for ACTA2 Gene
| SNP ID | Clin | Chr 10 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs112602953 | Pathogenic, Aortic aneurysm, familial thoracic 6 (AAT6) [MIM:611788] | 88,943,813(-) | CAACC(A/C/G)GGAGA | reference, missense | |
| rs121434526 | Pathogenic, Aortic aneurysm, familial thoracic 6 (AAT6) [MIM:611788] | 88,941,794(-) | CTGGA(C/T)GCACA | reference, missense | |
| rs121434527 | Pathogenic, Aortic aneurysm, familial thoracic 6 (AAT6) [MIM:611788] | 88,939,542(-) | TTTCC(A/G)CTGCC | nc-transcript-variant, reference, missense | |
| rs121434528 | Pathogenic, Aortic aneurysm, familial thoracic 6 (AAT6) [MIM:611788] | 88,939,543(-) | GTTTC(C/T)GCTGC | nc-transcript-variant, reference, missense | |
| rs387906592 | Pathogenic, Moyamoya disease 5 (MYMY5) [MIM:614042], Multisystemic smooth muscle dysfunction syndrome (MSMDYS) [MIM:613834] | 88,941,309(-) | CATGC(A/G)TCTGG | reference, missense |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv3624139 | CNV | gain | 21293372 |
| esv3624143 | CNV | loss | 21293372 |
| esv3624144 | CNV | gain | 21293372 |
| esv3624145 | CNV | loss | 21293372 |
| nsv825504 | CNV | loss | 20364138 |
| nsv831942 | CNV | gain | 17160897 |
| nsv831943 | CNV | gain | 17160897 |
| nsv948130 | CNV | duplication | 23825009 |
Relevant External Links for ACTA2 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ACTA2 Gene
Disorders for ACTA2 Gene
(21) MalaCards diseases for ACTA2 Gene - From: OMIM, ClinVar, GeneTests, Orphanet, Swiss-Prot, DISEASES, and GeneCards
| Disorder | Aliases | PubMed IDs |
|---|---|---|
| multisystemic smooth muscle dysfunction syndrome |
|
|
| moyamoya disease 5 |
|
|
| aortic aneurysm, familial thoracic 6 |
|
|
| acta2-related thoracic aortic aneurysms and aortic dissections |
|
|
| connective tissue disease |
|
|
UniProtKB/Swiss-Prot
ACTA_HUMAN- Aortic aneurysm, familial thoracic 6 (AAT6) [MIM:611788]: A disease characterized by permanent dilation of the thoracic aorta usually due to degenerative changes in the aortic wall. It is primarily associated with a characteristic histologic appearance known as medial necrosis or Erdheim cystic medial necrosis in which there is degeneration and fragmentation of elastic fibers, loss of smooth muscle cells, and an accumulation of basophilic ground substance. {ECO:0000269 PubMed:17994018, ECO:0000269 PubMed:19409525, ECO:0000269 PubMed:19639654}. Note=The disease is caused by mutations affecting the gene represented in this entry.
- Moyamoya disease 5 (MYMY5) [MIM:614042]: A progressive cerebral angiopathy characterized by bilateral intracranial carotid artery stenosis and telangiectatic vessels in the region of the basal ganglia. The abnormal vessels resemble a puff of smoke (moyamoya) on cerebral angiogram. Affected individuals can develop transient ischemic attacks and/or cerebral infarction, and rupture of the collateral vessels can cause intracranial hemorrhage. Hemiplegia of sudden onset and epileptic seizures constitute the prevailing presentation in childhood, while subarachnoid bleeding occurs more frequently in adults. {ECO:0000269 PubMed:20970362}. Note=The disease is caused by mutations affecting the gene represented in this entry.
- Multisystemic smooth muscle dysfunction syndrome (MSMDYS) [MIM:613834]: A syndrome characterized by dysfunction of smooth muscle cells throughout the body, leading to aortic and cerebrovascular disease, fixed dilated pupils, hypotonic bladder, malrotation, and hypoperistalsis of the gut and pulmonary hypertension. {ECO:0000269 PubMed:20734336}. Note=The disease is caused by mutations affecting the gene represented in this entry.
- Note=ACTA2 mutations predispose patients to a variety of diffuse and diverse vascular diseases, premature onset coronary artery disease (CAD), premature ischemic strokes and Moyamoya disease. {ECO:0000269 PubMed:19409525}.
Relevant External Links for ACTA2
No data available for Genatlas for ACTA2 Gene
Publications for ACTA2 Gene
- Mutations in smooth muscle alpha-actin (ACTA2) cause coronary artery disease, stroke, and Moyamoya disease, along with thoracic aortic disease. (PMID: 19409525) Guo D.-C. … Milewicz D.M. (Am. J. Hum. Genet. 2009) 3 4 22 64
- Mutations in smooth muscle alpha-actin (ACTA2) lead to thoracic aortic aneurysms and dissections. (PMID: 17994018) Guo D.-C. … Milewicz D.M. (Nat. Genet. 2007) 3 4 22 64
- Risk of dissection in thoracic aneurysms associated with mutations of smooth muscle alpha-actin 2 (ACTA2). (PMID: 21212136) Disabella E. … Arbustini E. (Heart 2011) 3 46 64
- Analysis of ACTA2 in European Moyamoya disease patients. (PMID: 20970362) Roder C. … Krischek B. (Eur. J. Paediatr. Neurol. 2011) 3 4 64
- Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 46 64
Products for ACTA2 Gene
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Sources for ACTA2 Gene
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