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Aliases for ACSBG1 Gene

Aliases for ACSBG1 Gene

  • Acyl-CoA Synthetase Bubblegum Family Member 1 2 3 4
  • Lipidosin 2 3 4
  • Very Long-Chain Acyl-CoA Synthetase 2 3
  • EC 6.2.1.3 4 63
  • Bubblegum 2 3
  • KIAA0631 4 6
  • LPD 3 4
  • BG1 3 6
  • BGM 3 4
  • BG 3 6
  • Long-Chain-Fatty-Acid--CoA Ligase ACSBG1 3
  • GR-LACS 3
  • HsBGM 4
  • HBG1 4
  • HsBG 4

External Ids for ACSBG1 Gene

Previous GeneCards Identifiers for ACSBG1 Gene

  • GC15M076247
  • GC15M078460
  • GC15M055220

Summaries for ACSBG1 Gene

Entrez Gene Summary for ACSBG1 Gene

  • The protein encoded by this gene possesses long-chain acyl-CoA synthetase activity. It is thought to play a central role in brain very long-chain fatty acids metabolism and myelinogenesis. [provided by RefSeq, Jul 2008]

GeneCards Summary for ACSBG1 Gene

ACSBG1 (Acyl-CoA Synthetase Bubblegum Family Member 1) is a Protein Coding gene. Among its related pathways are Metabolism and Adipocytokine signaling pathway. GO annotations related to this gene include long-chain fatty acid-CoA ligase activity and very long-chain fatty acid-CoA ligase activity. An important paralog of this gene is ACSBG2.

UniProtKB/Swiss-Prot for ACSBG1 Gene

  • Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Able to activate long-chain fatty acids. Also able to activate very long-chain fatty acids; however, the relevance of such activity is unclear in vivo. Can activate diverse saturated, monosaturated and polyunsaturated fatty acids.

Gene Wiki entry for ACSBG1 Gene

No data available for Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACSBG1 Gene

Genomics for ACSBG1 Gene

Genomic Location for ACSBG1 Gene

Start:
78,167,468 bp from pter
End:
78,245,688 bp from pter
Size:
78,221 bases
Orientation:
Minus strand

Genomic View for ACSBG1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ACSBG1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACSBG1 Gene

Proteins for ACSBG1 Gene

  • Protein details for ACSBG1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96GR2-ACBG1_HUMAN
    Recommended name:
    Long-chain-fatty-acid--CoA ligase ACSBG1
    Protein Accession:
    Q96GR2
    Secondary Accessions:
    • B2RB61
    • O75126
    • Q76N27
    • Q9HC26

    Protein attributes for ACSBG1 Gene

    Size:
    724 amino acids
    Molecular mass:
    81290 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAA31606.2; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};

neXtProt entry for ACSBG1 Gene

Proteomics data for ACSBG1 Gene at MOPED

Post-translational modifications for ACSBG1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

Domains for ACSBG1 Gene

Gene Families for ACSBG1 Gene

HGNC:
  • ACS :Acyl-CoA synthetase family

Protein Domains for ACSBG1 Gene

Suggested Antigen Peptide Sequences for ACSBG1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96GR2

UniProtKB/Swiss-Prot:

ACBG1_HUMAN :
  • Q96GR2
Family:
  • Belongs to the ATP-dependent AMP-binding enzyme family. Bubblegum subfamily.
genes like me logo Genes that share domains with ACSBG1: view

Function for ACSBG1 Gene

Molecular function for ACSBG1 Gene

UniProtKB/Swiss-Prot CatalyticActivity:
ATP + a long-chain fatty acid + CoA = AMP + diphosphate + an acyl-CoA.
UniProtKB/Swiss-Prot Function:
Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Able to activate long-chain fatty acids. Also able to activate very long-chain fatty acids; however, the relevance of such activity is unclear in vivo. Can activate diverse saturated, monosaturated and polyunsaturated fatty acids.

Enzyme Numbers (IUBMB) for ACSBG1 Gene

Gene Ontology (GO) - Molecular Function for ACSBG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003824 catalytic activity --
GO:0004467 long-chain fatty acid-CoA ligase activity IDA 10954726
GO:0005524 ATP binding IEA --
GO:0031957 very long-chain fatty acid-CoA ligase activity IDA 10954726
genes like me logo Genes that share ontologies with ACSBG1: view
genes like me logo Genes that share phenotypes with ACSBG1: view

Animal Models for ACSBG1 Gene

MGI Knock Outs for ACSBG1:

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ACSBG1

In Situ Assay Products

Flow Cytometry Products

No data available for miRNA , Transcription Factor Targeting and HOMER Transcription for ACSBG1 Gene

Localization for ACSBG1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ACSBG1 Gene

Cytoplasm. Cytoplasmic vesicle. Microsome. Endoplasmic reticulum.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ACSBG1 Gene COMPARTMENTS Subcellular localization image for ACSBG1 gene
Compartment Confidence
cytosol 2
endoplasmic reticulum 2
nucleus 2
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ACSBG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IDA 10954726
GO:0005783 endoplasmic reticulum IEA --
GO:0016023 cytoplasmic membrane-bounded vesicle IEA --
GO:0031410 cytoplasmic vesicle --
genes like me logo Genes that share ontologies with ACSBG1: view

Pathways for ACSBG1 Gene

genes like me logo Genes that share pathways with ACSBG1: view

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Interacting Proteins for ACSBG1 Gene

Gene Ontology (GO) - Biological Process for ACSBG1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000038 very long-chain fatty acid metabolic process IDA 10954726
GO:0001552 ovarian follicle atresia IEA --
GO:0001676 long-chain fatty acid metabolic process IDA 10954726
GO:0008152 metabolic process --
GO:0042552 myelination NAS 10954726
genes like me logo Genes that share ontologies with ACSBG1: view

Compounds for ACSBG1 Gene

(34) HMDB Compounds for ACSBG1 Gene

Compound Synonyms Cas Number PubMed IDs
(2E)-Decenoyl-CoA
  • (E)-S-2-decenoate Coenzyme A
10018-95-8
(2E)-Dodecenoyl-CoA
  • 2-trans-Dodecenoyl-Coenzyme A
1066-12-2
(2E)-Hexadecenoyl-CoA
  • trans-2-Hexadecenoyl-CoA
4460-95-1
(2E)-Octenoyl-CoA
  • (E)-S-2-octenoate Coenzyme A
10018-94-7
(2E)-Tetradecenoyl-CoA
  • (2E)-Tetradecenoyl-Coenzyme A
38795-33-4

(1) Drugbank Compounds for ACSBG1 Gene

Compound Synonyms Cas Number Type Actions PubMed IDs
2-(6-HYDROXY-1,3-BENZOTHIAZOL-2-YL)-1,3-THIAZOL-4(5H)-ONE
target
genes like me logo Genes that share compounds with ACSBG1: view

Transcripts for ACSBG1 Gene

Unigene Clusters for ACSBG1 Gene

Acyl-CoA synthetase bubblegum family member 1:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ACSBG1

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ACSBG1 Gene

No ASD Table

Relevant External Links for ACSBG1 Gene

GeneLoc Exon Structure for
ACSBG1
ECgene alternative splicing isoforms for
ACSBG1

Expression for ACSBG1 Gene

mRNA expression in normal human tissues for ACSBG1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ACSBG1 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (6.7), Brain - Caudate (basal ganglia) (6.0), Brain - Putamen (basal ganglia) (5.4), Brain - Nucleus accumbens (basal ganglia) (5.0), and Brain - Amygdala (4.2).

Protein differential expression in normal tissues for ACSBG1 Gene

This gene is overexpressed in Bone marrow mesenchymal stem cell (57.0) and Spinal cord (6.2).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ACSBG1 Gene

SOURCE GeneReport for Unigene cluster for ACSBG1 Gene Hs.655760

mRNA Expression by UniProt/SwissProt for ACSBG1 Gene

Q96GR2-ACBG1_HUMAN
Tissue specificity: Expressed primarily in brain. Expressed at lower level in testis and adrenal gland. Present in all regions of brain except pituitary.
genes like me logo Genes that share expressions with ACSBG1: view

Expression partners for ACSBG1 Gene

In Situ Assay Products

Orthologs for ACSBG1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ACSBG1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ACSBG1 35
  • 88.1 (n)
  • 87.96 (a)
ACSBG1 36
  • 86 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ACSBG1 35
  • 86.76 (n)
  • 88 (a)
ACSBG1 36
  • 87 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Acsbg1 35
  • 84.95 (n)
  • 86.81 (a)
Acsbg1 16
Acsbg1 36
  • 87 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia ACSBG1 35
  • 99.45 (n)
  • 99.31 (a)
ACSBG1 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Acsbg1 35
  • 85.51 (n)
  • 86.94 (a)
oppossum
(Monodelphis domestica)
Mammalia ACSBG1 36
  • 76 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ACSBG1 36
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves ACSBG1 35
  • 67.39 (n)
  • 68.7 (a)
ACSBG1 36
  • 68 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ACSBG1 36
  • 68 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii LOC100006023 35
  • 61.72 (n)
  • 61.88 (a)
acsbg1 36
  • 61 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta bgm 36
  • 40 (a)
ManyToMany
CG4500 36
  • 37 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea acs-3 36
  • 21 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes FAA2 36
  • 19 (a)
OneToMany
Species with no ortholog for ACSBG1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ACSBG1 Gene

ENSEMBL:
Gene Tree for ACSBG1 (if available)
TreeFam:
Gene Tree for ACSBG1 (if available)

Paralogs for ACSBG1 Gene

Paralogs for ACSBG1 Gene

Selected SIMAP similar genes for ACSBG1 Gene using alignment to 8 proteins:

Pseudogenes.org Pseudogenes for ACSBG1 Gene

genes like me logo Genes that share paralogs with ACSBG1: view

Variants for ACSBG1 Gene

Sequence variations from dbSNP and Humsavar for ACSBG1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs389757 -- 78,196,168(-) AGTGG(C/G)ATGGG intron-variant
rs425021 -- 78,185,042(-) CCTCC(A/C/G)CCCCT intron-variant
rs426187 -- 78,196,169(-) CAGTG(C/G)CATGG intron-variant
rs766872 -- 78,183,123(+) GGGCA(C/G)AGGAG intron-variant
rs766873 -- 78,183,116(+) GAGCA(C/G)AGGGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ACSBG1 Gene

Variant ID Type Subtype PubMed ID
nsv904430 CNV Loss 21882294

Relevant External Links for ACSBG1 Gene

HapMap Linkage Disequilibrium report
ACSBG1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ACSBG1 Gene

Disorders for ACSBG1 Gene

(1) University of Copenhagen DISEASES for ACSBG1 Gene

Relevant External Links for ACSBG1

Genetic Association Database (GAD)
ACSBG1
Human Genome Epidemiology (HuGE) Navigator
ACSBG1
genes like me logo Genes that share disorders with ACSBG1: view

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , Novoseek inferred disease relationships and Genatlas for ACSBG1 Gene

Publications for ACSBG1 Gene

  1. The acyl-CoA synthetase 'bubblegum' (lipidosin): further characterization and role in neuronal fatty acid beta-oxidation. (PMID: 12975357) Pei Z. … Watkins P.A. (J. Biol. Chem. 2003) 3 4 23
  2. Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PMID: 9734811) Ishikawa K. … Ohara O. (DNA Res. 1998) 2 3 4
  3. Very long-chain acyl-CoA synthetases. Human 'bubblegum' represents a new family of proteins capable of activating very long-chain fatty acids. (PMID: 10954726) Steinberg S.J. … Watkins P.A. (J. Biol. Chem. 2000) 2 3 4
  4. X-linked adrenoleukodystrophy: role of very long-chain acyl-CoA synthetases. (PMID: 15464426) Jia Z. … Watkins P.A. (Mol. Genet. Metab. 2004) 3 23
  5. Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling. (PMID: 19240061) Trynka G. … Wijmenga C. (Gut 2009) 3 48

Products for ACSBG1 Gene

Sources for ACSBG1 Gene

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