ACPL2 Gene
protein-coding GIFtS : 52
GCID: GC03 P140950
acid phosphatase-like 2
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Aliasesfor ACPL2 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Acid Phosphatase-Like 2 1 2 EC 3.1.3.23 8 FLJ237511 Acid Phosphatase-Like Protein 22
Export aliases for ACPL2 gene to outside databases Previous GC identifers: GC03P142433 GC03P138325
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Summariesfor ACPL2 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section --
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Genomic Viewsfor ACPL2 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000003.11 NC_018914.1 NT_005612.16 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the ACPL2 gene promoter: AML1a POU3F2 (N-Oct-5a) POU3F2 (N-Oct-5b) CUTL1 POU3F2 FOXC1 GATA-6 POU2F1 POU2F1a Msx-1 Other transcription factors Search SABiosciences Chromatin IP Primers for ACPL2 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat ACPL2
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 3q23 Ensembl cytogenetic band: 3q23 HGNC cytogenetic band: 3q23 ACPL2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03P140950: view genomic region
(about GC identifiers )
Start:
140,947,568 bp from pter
End:
141,013,748 bp from pter
Size:
66,181 bases
Orientation:
plus strand
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Proteinsfor ACPL2 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: ACPL2_HUMAN, Q8TE99 (See
protein sequence )Recommended Name: Acid phosphatase-like protein 2 precursor Size : 480 amino acids; 55240 Da
Subcellular location : Secreted (Potential)
Secondary accessions : D3DNF5 Q49AJ2Alternative splicing : 2 isoforms : Q8TE99-1 Q8TE99-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for ACPL2: NX_Q8TE99 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q8TE99 4 DME Specific Peptides for ACPL2 (Q8TE99 ) ACPL2 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001032249.1 NP_689495.1 ENSEMBL proteins: ENSP00000421271 ENSP00000425264 ENSP00000286353 ENSP00000422558 ENSP00000376733 ENSP00000426956 ENSP00000426348 ENSP00000423702 ENSP00000426877 ENSP00000422901 ENSP00000376731 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005576 extracellular region
IEA --
ACPL2 for ontologies About GeneDecksing ACPL2 Antibody Products: Assay Products for ACPL2:
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Protein
Domains / Familiesfor ACPL2 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
ACPL2 for domains About GeneDecksing 1 InterPro domain/family :
Graphical View of Domain Structure for InterPro Entry Q8TE99 ProtoNet protein and cluster: Q8TE99
1 Blocks protein family : IPB000560 Histidine acid phosphatase UniProtKB/Swiss-Prot: ACPL2_HUMAN, Q8TE99 Similarity : Belongs to the histidine acid phosphatase family
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Functionfor ACPL2 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: ACPL2_HUMAN, Q8TE99 Catalytic activity : A phosphate monoester + H(2)O = an alcohol + phosphateEnzyme Number (IUBMB): EC 3.1.3.2 1 2
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): ACPL2 (NM_152282 ) Sino Biological Human cDNA Clone for ACPL2 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ACPL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ACPL2
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACPL2
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0003993 acid phosphatase activity
IEA --
ACPL2 for ontologies About GeneDecksing 5 GenomeRNAi human phenotypes for ACPL2 :Animal Models: Mouse knock-out Acpl2 tm1Lex for ACPL2 1 MGI phenotypic allele for Acpl2 (no phenotypes)
ACPL2 for phenotypes About GeneDecksing
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Pathways & Interactionsfor ACPL2 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 NAD phosphorylation and dephosphorylation 2 Nicotinate metabolism
2 BioSystems Pathways for ACPL2 Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ACPL2 STRING Interaction
Network Preview (showing 3 interactants - click image to see more details)3 Interacting proteins for ACPL2 (ENSP00000286353 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table
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Drugs & Compoundsfor ACPL2 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for ACPL2 7 HMDB Compounds for ACPL2 About this table Search CenterWatch for drugs/clinical trials and news about ACPL2
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Transcriptsfor ACPL2 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for ACPL2 gene (2 alternative transcripts): NM_001037172.1 NM_152282.3 Unigene Cluster for ACPL2:
Acid phosphatase-like 2 Hs.657887 [show with all ESTs ] Unigene Representative Sequence: BC036701 15 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000505013 ENST00000514880 ENST00000286353 (uc003etv.3 uc011bna.2 )ENST00000502783 ENST00000393010 (uc003etu.3 uc011bnb.2 ) ENST00000511968 ENST00000514680 ENST00000513528 ENST00000505502 ENST00000513007 ENST00000512457 ENST00000504264 ENST00000508812 ENST00000514263 ENST00000393007 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): ACPL2 (NM_152282 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ACPL2 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ACPL2
Additional cDNA sequence: AK074331.1 AK296292.1 AK297790.1 AK316121.1 AL137529.1 AY358460.1 BC035834.1 BC036701.1 BX647621.1
11 DOTS entries : DT.441371 DT.95102985
DT.101961832 DT.75145147 DT.100776711 DT.100653995 DT.102887 DT.120898482 DT.95164751 DT.95216156 DT.97840654 24/109 AceView cDNA sequences (see all 109 ):
BQ772332 BQ721935 BX114498 BQ022307 C02599 AA398161 AK074331 BQ771835 BQ000536 AA588462 AI459978 BM716853 BQ575661 CN479919 AL699456 AI214440 AA777284 AL137529 BQ025005 BI830132 AI362309 AW451826 CD637673 BF792731 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for ACPL2 About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b SP1 :     -       -     -   -             SP2 :     -   -   -   -     -   -             SP3 :                             SP4 :     -                         SP5 :       -   -   -                  
ECgene alternative splicing isoforms for ACPL2
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Expression for ACPL2 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section ACPL2 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: TTACTATGTG
About this image ACPL2 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 2 LifeMap In Vivo Development Anatomical Compartments/Cells Tissue Anatomical Compartment
Cell Category (developmental path) Bone Thoracic Rib Bone Cartilage Meckel's Cartilage Cartilage Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
Stem Cell Differentiation: 1 LifeMap Cell Name Category Cartilage-like cells (Differentiation of s... )Cartilage
See ACPL2 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for ACPL2 SOURCE GeneReport for Unigene cluster: Hs.657887 SABiosciences Custom PCR Arrays for ACPL2 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ACPL2Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat ACPL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ACPL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ACPL2 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACPL2
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Orthologsfor ACPL2 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for ACPL2 gene from 7/19 species (see all 19 ) About this table
ENSEMBL Gene Tree for ACPL2 (if available)TreeFam Gene Tree for ACPL2 (if available)
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Paralogsfor ACPL2 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor ACPL2 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 3 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for ACPL2 (140947568 - 141013748 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for ACPL2: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ACPL2
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Disorders
/ Diseasesfor ACPL2 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
ACPL2 for disorders About GeneDecksing 1 disease for ACPL2 : About MalaCards alcoholism Human Genome Epidemiology (HuGE) Navigator: ACPL2 (1 document)Export disorders for ACPL2 gene to outside databases
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Publicationsfor ACPL2 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for ACPL2 gene integrated from 9 sources : (articles sorted by number of sources associating them with ACPL2) Utopia : connect your pdf to the dynamic world of online information
The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309) 1 , 2 Clark H.F.... Gray A.M. (2003) Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724) 1 Udeshi N.D....Carr S.A. (2012) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010) Identification of 15 loci influencing height in a Kor ean population. (PubMed id 19893584) 1 Kim J.J....Lee J.K. (2010) A genome-wide study of common SNPs and CNVs in cognit ive performance in the CANTAB. (PubMed id 19734545) 1 Need A.C....Goldstein D.B. (2009) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 2 Ota T.... Sugano S. (2004) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for ACPL2 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing ACPL2 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing ACPL2 gene
(According to HUGE )
About This Section --
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Specialized Databases showing ACPL2 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for ACPL2 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for ACPL2 gene: Search GeneIP for patents involving ACPL2 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor ACPL2 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for ACPL2 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for ACPL2 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ACPL2 OriGene Protein Over-expression Lysate for ACPL2 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for ACPL2 OriGene 3'-UTR Clone for ACPL2 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ACPL2 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for ACPL2 OriGene Custom Protein Services for ACPL2 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ACPL2 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ACPL2 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat ACPL2 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat ACPL2 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ACPL2 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ACPL2
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ACPL2 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ACPL2
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ACPL2
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Aliases for ACPL2
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Disorders / Diseases for ACPL2
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Expression for ACPL2
Function for ACPL2
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