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Aliases & Descriptions for ACP1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 3.1.3.48,EC 3.1.3.2 3 HAAP 2 LMW-PTP 3 LMW-PTPase 3 MGC111030 2 MGC3499 2
Descriptions Adipocyte acid phosphatase 2 , 3 Low molecular weight cytosolic acid phosphatase 3 Red cell acid phosphatase 1 2 , 3 acid phosphatase 1, soluble 2 acid phosphatase of erythrocyte 2 cytoplasmic phosphotyrosyl protein phosphatase 2 low molecular weight phosphotyrosine protein phosphatase 2 protein tyrosine phosphatase 2
Search outside databases for aliases for ACP1 genePrevious GC identifer: GC02P000258
Summaries for ACP1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ACP1 : The product of this gene belongs to the phosphotyrosine protein phosphatase family of proteins. Itfunctions as an acid phosphatase and a protein tyrosine phosphatase by hydrolyzing proteintyrosine phosphate to protein tyrosine and orthophosphate. This enzyme also hydrolyzesorthophosphoric monoesters to alcohol and orthophosphate. This gene is genetically polymorphic,and three common alleles segregating at the corresponding locus give rise to six phenotypes. Eachallele appears to encode at least two electrophoretically different isozymes, Bf and Bs, which areproduced in allele-specific ratios. Multiple alternatively spliced transcript variants encodingdistinct isoforms have been identified for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 Function : Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural andsynthetic acyl phosphates. Isoform 3 does not possess phosphatase activity
Gene Wiki entry for ACP1
Genomic Location for ACP1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ACP1 gene Entrez Gene cytogenetic band: 2p25 Ensembl cytogenetic band: 2p25.3 HGNC cytogenetic band: 2p25 ACP1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P000254:
(about GC identifiers )
Start:
254,872 bp from pter
End:
268,283 bp from pter
Size:
13,412 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_022327.14 Proteins for ACP1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 (See
protein sequence )Recommended Name: Low molecular weight phosphotyrosine protein phosphatase Size : 158 amino acids; 18042 Da
Subunit : Isoform 1 interacts with the SH3 domain of SPTAN1. There is no interaction observed forisoforms 2 or 3
Subcellular location : Cytoplasm
PDB structure from and Proteopedia : 1XWW (3D)
 5PNT (3D)
 
Secondary accessions : P24667 Q16035 Q16036 Q16725 Q3KQX8 Q53RU0Alternative splicing : 3 isoforms : P24666-1 P24666-2, P24667-1 P24666-3 (The ratio of isoform 1 to isoform 2 is 2:1 in allele A, 4:1 in allele B and 1:4 in allele C)
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001035739.1 NP_004291.1 NP_009030.1 ENSEMBL proteins: ENSP00000272066 ENSP00000384184 ENSP00000385404 ENSP00000384307 ENSP00000272065 ENSP00000272067 Human Recombinant Proteins                OriGene Purified Recombinant Human Proteins (see all 2 ): ACP1 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ACP1: Assays for ACP1:
Protein
Domains/ Families for ACP1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P24666 ProtoNet protein and cluster: P24666
2 Blocks protein families : IPB000106 LMW phosphotyrosine protein phosphatase signature IPB002115 Mammalian LMW phosphotyrosine protein phosphatase signature UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 Similarity : Belongs to the low molecular weight phosphotyrosine protein phosphatase family
Gene Function for ACP1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_004300 Applied Biosystems Silencer ® siRNAs for ACP1 Sigma-Aldrich siRNA and siRNA Panels for ACP1 Sigma-Aldrich shRNA Panels and shRNA for ACP1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001040649                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001040649                                  untagged cDNA clones in CMV expression vector (see all 7 ): BC020699  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_007099 UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 Function : Acts on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural andsynthetic acyl phosphates. Isoform 3 does not possess phosphatase activity Catalytic activity : Protein tyrosine phosphate + H(2)O = protein tyrosine + phosphateCatalytic activity : A phosphate monoester + H(2)O = an alcohol + phosphateEnzyme regulation : Inhibited by sulfhydryl reagentsEnzyme Number (IUBMB): EC 3.1.3.48,EC
Genatlas biochemistry entry for ACP1 :phosphatase acid,red cell 4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ACP1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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3 Sigma-Aldrich "Your Favorite Gene" Pathways for ACP1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ACP1 5/37 Interacting proteins for ACP1 (ENSP00000272067 3 P24666 1 ) via UniProtKB, MINT, and/or STRING (see all 37
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006470 protein amino acid dephosphorylation
IEA --
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Drugs & Compounds for ACP1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ACP1 10/36 Novoseek chemical compound relationships for ACP1 gene (see all 36
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
94.57
3400
16039061 (12), 15477998 (6), 10980198 (5), 8258363 (5) (see all 99 )
phosphotyrosine
92.06
208
7679612 (5), 2134890 (3), 8620937 (3), 7686722 (3) (see all 99 )
sodium orthovanadate
88.57
74
10230815 (2), 11507066 (2), 8186375 (1), 8014198 (1) (see all 63 )
vanadate
88.28
138
11980490 (4), 2154464 (3), 9878539 (2), 10439081 (2) (see all 99 )
raytide
80.64
5
1318316 (1), 7684610 (1), 8256510 (1)
p-nitrophenyl phosphate
77.13
7
8127855 (2), 2134890 (1), 7528537 (1), 7589546 (1) (see all 6 )
dephostatin
73.95
8
8557604 (4), 8226312 (1)
bpv(phen)
71.60
3
16039061 (1), 11792460 (1)
benzylphosphonic acid
70.50
2
9458714 (1), 9106619 (1)
cl 100
68.49
8
7780739 (2), 8106404 (2), 8390041 (1), 7806236 (1)
About this table
Transcripts for ACP1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 5 ): NM_004300 Sigma-Aldrich siRNA and siRNA Panels for ACP1 Sigma-Aldrich shRNA Panels and shRNA for ACP1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001040649 NM_004300 NM_007099
REFSEQ mRNAs for ACP1 gene (3 alternative transcripts): NM_001040649.2 NM_004300.3 NM_007099.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001040649 NM_004300 NM_007099
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001040649                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001040649                                  untagged cDNA clones in CMV expression vector (see all 7 ): BC020699  
Additional cDNA sequence: AB209838.1 AK289934.1 AK291861.1 BC007422.2 BC106011.1 BT007136.1 CR591454.1 CR597555.1 CR599434.1 CR607431.1 CR609595.1 CR609802.1 CR613475.1 CR624312.1 M83653.1 M83654.1 M87545.1 S62884.1 Y16846.1
20 DOTS entries : DT.100842980 DT.99931855 DT.100030203 DT.454219 DT.100842972 DT.100842978 DT.119141 DT.121013711 DT.100742580 DT.100842976 DT.95256266 DT.100842982 DT.119140 DT.95256302 DT.121013776 DT.121013819 DT.91759792 DT.95256278 DT.121417499 DT.99984839
24/473 AceView cDNA sequences (see all 473
):CD251736 CR599434 NM_004300 CR609595 BM477153 CR597555 BM970524 AW769370 BM770461 CD675878 AA568474 BM460072 CD673215 BU539875 BE905801 BM793724 NM_007099 BF726270 BM825165 BE618323 AI056981 BG056276 AI167367 AL573837
highest scoring ESTs for ACP1 :AA037447 AA037448 AA056583 AA115242 AA130244 AA130248 AA205145 AA467733 AA467801 AA479138
Unigene Cluster for ACP1: Acid phosphatase 1, soluble Hs.558296 [show with all ESTs ] Unigene Representative Sequence: NM_004300 GeneLoc Exon Structure 5/9 Alternative Splicing Database (ASD) splice patterns (SP) for ACP1 (see all 9
) ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b · 9c · 9d · 9e · 9f · 9g SP1 :           -       -       -   -   -                     SP2 :           -   -     -     -   -     -                     SP3 :           -   -     -   -   -   -     -                     SP4 :           -   -     -       -   -   -                     SP5 :             -     -       -   -   -                    
About this scheme ECgene alternative splicing isoforms for ACP1 6 Ensembl transcripts including schematic representations : ENST00000272066
ENST00000405364
ENST00000407983
ENST00000405233
ENST00000272065
ENST00000272067
Expression for ACP1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ACP1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ACP1 1 / 2 / 3
8 probe-sets matching ACP1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: AATATTTCAASOURCE GeneReport for Unigene cluster: Hs.558296 Expression variation in blood from EXPOLDB for ACP1
UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 Tissue specificity : T-lymphocytes express only isoform 2
Orthologs for ACP1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ACP1 gene from 5/18 species (see all 18
)
About this table Species with no ortholog for ACP1 ENSEMBL Gene Tree for ACP1 Paralogs for ACP1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Pseudogenes 3 related pseudogenes
SNPs/Variants for ACP1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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UniProtKB/Swiss-Prot: PPAC_HUMAN, P24666 Polymorphism : ACP1 is genetically polymorphic. Three common alleles are known in Caucasians:ACP1*A, ACP1*B and ACP1*C. They give rise to six different phenotypes. Each allele appears toencode two electrophoretically different isozymes, F and S, which are produced in allele-specificratios. The sequence shown is that of allele ACP1*B and allele ACP1*C
HapMap Linkage Disequilibrium images for ACP1 (up to first 250kb)
Disorders & Mutations for ACP1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 171500 10/90 Novoseek disease relationships for ACP1 gene (see all 90
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
noonan syndrome
69.18
10
15240615 (2), 12161469 (2), 16208280 (1), 19407499 (1) (see all 8 )
bubonic plague
61.79
7
1723471 (1), 14609321 (1), 8052312 (1), 7803389 (1) (see all 5 )
myotubular myopathy
51.08
2
10900271 (1), 11056007 (1)
lafora disease
46.82
6
9771710 (1), 16134145 (1), 14643920 (1), 17010495 (1) (see all 5 )
insulin resistance
39.92
32
18925540 (4), 15271787 (2), 7769120 (2), 7535776 (1) (see all 21 )
leopard syndrome
38.27
1
16208280 (1)
favism
36.02
2
8522318 (1), 9116311 (1)
autoimmunity
34.39
6
17608818 (1), 11826758 (1), 18303998 (1), 18416318 (1) (see all 6 )
immune disorder
30.31
1
18490013 (1)
autoimmune diseases
27.54
10
17868256 (1), 10885457 (1), 18056891 (1), 16163373 (1) (see all 10 )
About this table Genetic Association Database: ACP1 Human Genome Epidemiology Navigator: ACP1 (29 documents)
Medical News for ACP1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ACP1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1298 PubMed articles for ACP1 gene (see all 1298
): Association of the ACP1 genotype with metabolic parameters upon initial diagnosis of type 1 diabetes. (PubMed id 12640337) 1, 3, 6 Meloni G....Bottini E. (2003) Type 2 diabetes and the genetics of signal transduction: a study of interaction between adenosine deaminase and acid phosphatase locus 1 polymorphisms. (PubMed id 15281007) 1, 3, 6 Bottini N....Bottini E. (2004) Genetic polymorphism and TH1/TH2 orientation. (PubMed id 16224193) 1, 3, 6 Bottini N....Bottini E. (2005) [Genetic predisposition to development of toxic liver cirrhosis caused by alcohol] (PubMed id 11436564) 1, 3, 6 Spitsyn V.A....Afanas'eva I.S. (2001) Risk of type 1 diabetes in childhood and maternal age at delivery, interaction with ACP1 and sex. (PubMed id 15586390) 1, 3, 6 Bottini N....Bottini E. (2005) [Genetic polymorphism of erythrocytic enzymes in Yakut populations] (PubMed id 11963573) 1, 3, 6 Tarskaia L.A....Spitsin V.A. (2002) Association of the acid phosphatase (ACP1) gene with triglyceride levels in obese women. (PubMed id 12409270) 1, 3, 6 Bottini N....Comings D.E. (2002) The genetics of signal transduction and the effect of smoking on intrauterine growth. (PubMed id 11369750) 1, 3, 6 Bottini E....Lucarini N. (2001) Crystal structure of a human low molecular weight phosphotyrosyl phosphatase. Implications for substrate specificity. (PubMed id 9705307) 1, 3, 4 Zhang M.... van Etten R.L. (1998) Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. (PubMed id 15951569) 3, 4 Zhang Y.... White F.M. (2005)
Search for ACP1
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Genome Databases showing ACP1
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ACP1
(According to HUGE )
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Specialized Databases showing ACP1 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ACP1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ACP1:
Search Tocris compounds for ACP1
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009