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Aliases & Descriptions for ACOT7
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ACH1 1 , 2 ACT 1 , 2 BACH 1 , 2 , 3 , 5 CTE-II 1 , 2 , 3 CTE-IIa 3 EC 3.1.2.2 3 LACH 2 , 5 LACH1 1 , 2 MGC1126 1 , 2 OTTHUMP00000001410 2 OTTHUMP00000001413 2 OTTHUMP00000001414 2 hBACH 1 , 2
Descriptions Brain acyl-CoA hydrolase 2 , 3 Long chain acyl-CoA thioester hydrolase 2 , 3 acyl-CoA thioesterase 2 2 acyl-CoA thioesterase 7 2 , 3 acyl-CoA thioesterase, long chain 2 brain acyl CoA hydrolase 2 cytosolic acyl coenzyme A thioester hydrolase 2
Search outside databases for aliases for ACOT7 gene
Summaries for ACOT7 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ACOT7 : This gene encodes a member of the acyl coenzyme family. The encoded protein hydrolyzes the CoAthioester of palmitoyl-CoA and other long-chain fatty acids. Decreased expression of this gene maybe associated with mesial temporal lobe epilepsy. Alternatively spliced transcript variantsencoding distinct isoforms with different subcellular locations have been characterized. [providedby RefSeq] UniProtKB/Swiss-Prot: BACH_HUMAN, O00154 Function : Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAsto the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellularlevels of acyl-CoAs, free fatty acids and CoASH. May play an important physiological function inbrain. May play a regulatory role by modulating the cellular levels of fatty acyl-CoA ligands forcertain transcription factors as well as the substrates for fatty acid metabolizing enzymes,contributing to lipid homeostasis. Has broad specificity, active towards fatty acyl-CoAs withchain-lengths of C8-C18. Has a maximal activity toward palmitoyl-CoA
Gene Wiki entry for ACOT7
Genomic Location for ACOT7
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ACOT7 gene Entrez Gene cytogenetic band: 1p36.31-p36.11 Ensembl cytogenetic band: 1p36.31 HGNC cytogenetic band: 1p36 ACOT7 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M006259:
(about GC identifiers )
Start:
6,246,919 bp from pter
End:
6,376,413 bp from pter
Size:
129,495 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000001.9 NT_021937.18 Proteins for ACOT7
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: BACH_HUMAN, O00154 (See
protein sequence )Recommended Name: Cytosolic acyl coenzyme A thioester hydrolase Size : 380 amino acids; 41796 Da
Subunit : Homodimer (Probable)
Subcellular location : Isoform 4: Cytoplasm
Subcellular location : Isoform 6: Cytoplasm
Subcellular location : Isoform 1: Mitochondrion
Subcellular location : Isoform 5: Mitochondrion
Sequence caution : Sequence=AAB61211.1; Type=Frameshift; Positions=371;
PDB structures from and Proteopedia : 2QQ2 (3D)
 
Secondary accessions : A8K0K7 O43703 Q53Y78 Q5JYL2 Q5JYL3 Q5JYL4 Q5JYL5 Q5JYL6 Q5TGR4 Q9UJM9 Q9Y539Q9Y540 Alternative splicing : 6 isoforms : O00154-1 O00154-2 O00154-3 O00154-4 O00154-5 O00154-6
REFSEQ proteins (4 alternative transcripts):
NP_009205.3 NP_863654.1 NP_863655.1 NP_863656.1 ENSEMBL proteins: ENSP00000367089 ENSP00000367091 ENSP00000367073 ENSP00000367076 ENSP00000354615 ENSP00000367086 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: ACOT7 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ACOT7: Assays for ACOT7:
Protein
Domains/ Families for ACOT7(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O00154 ProtoNet protein and cluster: O00154
UniProtKB/Swiss-Prot: BACH_HUMAN, O00154 Similarity : Contains 2 acyl coenzyme A hydrolase domains
Gene Function for ACOT7
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
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Millipore ,
OriGene , and/or
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siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_007274 Applied Biosystems Silencer ® siRNAs for ACOT7 Sigma-Aldrich siRNA for ACOT7 Sigma-Aldrich shRNA for ACOT7 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_007274                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_007274                                  untagged cDNA clones in CMV expression vector (see all 6 ): NM_007274  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_181864 UniProtKB/Swiss-Prot: BACH_HUMAN, O00154 Function : Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAsto the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellularlevels of acyl-CoAs, free fatty acids and CoASH. May play an important physiological function inbrain. May play a regulatory role by modulating the cellular levels of fatty acyl-CoA ligands forcertain transcription factors as well as the substrates for fatty acid metabolizing enzymes,contributing to lipid homeostasis. Has broad specificity, active towards fatty acyl-CoAs withchain-lengths of C8-C18. Has a maximal activity toward palmitoyl-CoA Catalytic activity : Palmitoyl-CoA + H(2)O = CoA + palmitateEnzyme Number (IUBMB): EC 3.1.2.2
1 MGI phenotypic allele for Acot7 (no phenotypes)4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ACOT7
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/11 Interacting proteins for ACOT7 (ENSP00000367086 3 O00154 2 ) via UniProtKB, MINT, and/or STRING (see all 11
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
About this table
Drugs & Compounds for ACOT7 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ACOT7 2 Novoseek chemical compound relationships for ACOT7 gene
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Transcripts for ACOT7(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
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siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 6 ): NM_007274 Sigma-Aldrich siRNA for ACOT7 Sigma-Aldrich shRNA for ACOT7 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_007274 NM_181864 NM_181865 NM_181866
REFSEQ mRNAs for ACOT7 gene (4 alternative transcripts): NM_007274.3 NM_181864.2 NM_181865.2 NM_181866.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_007274 NM_181864 NM_181865 NM_181866
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_007274                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_007274                                  untagged cDNA clones in CMV expression vector (see all 6 ): NM_007274  
Additional cDNA sequence: AB074417.1 AB074418.1 AB074419.1 AK057168.1 AK289572.1 AK290097.1 AK291583.1 AK292202.1 AK300831.1 AK304465.1 BC017365.2 BT006888.1 CR593786.1 CR594456.1 CR595220.1 CR597165.1 CR599443.1 CR599569.1 CR603255.1 CR604226.1 CR605522.1 CR606054.1 CR608567.1 CR611815.1 CR614606.1 CR615031.1 CR617887.1 CR620600.1 CR620739.1 D88894.2
13 DOTS entries : DT.449444 DT.100882148 DT.87017261 DT.87017263 DT.100882155 DT.100882133 DT.121351036 DT.95361277 DT.95361290 DT.121274009 DT.121351044 DT.100882139 DT.121351082
24/350 AceView cDNA sequences (see all 350
):CB138691 CD107361 NM_181863 CR604226 BI858286 BM846520 F12498 BI861417 BT006888 BM669679 BQ439022 CR595220 CR617887 BM908868 CR620600 BP338388 CB125794 CR611815 BQ425408 CR620739 AU104967 BI193315 CR615031 CR606054
highest scoring ESTs for ACOT7 :AA923265 AK057168 AU099272 AW025033 AW327399 AW674832 BC017365 BE260274 BE260742 BE274746
Unigene Cluster for ACOT7: Acyl-CoA thioesterase 7 Hs.126137 [show with all ESTs ] Unigene Representative Sequence: BC017365 GeneLoc Exon Structure 5/9 Alternative Splicing Database (ASD) splice patterns (SP) for ACOT7 (see all 9
) ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b ^ 10a · 10b · 10c ^ 11a · 11b ^ 12a · 12b ^ 13a · 13b SP1 :     -   -   -                 -     -               SP2 :     -   -   -                 -     -   -             SP3 :     -   -   -                 -     -   -   -           SP4 :         -                 -     -   -   -           SP5 :                         -     -   -   -          
About this scheme ECgene alternative splicing isoforms for ACOT7 6 Ensembl transcripts including schematic representations : ENST00000377858
ENST00000377860
ENST00000377842
ENST00000377845
ENST00000361521
ENST00000377855
Expression for ACOT7
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ACOT7 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ACOT7 1 / 2 / 3
6 probe-sets matching ACOT7 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GCAACGGGCCSOURCE GeneReport for Unigene cluster: Hs.126137 UniProtKB/Swiss-Prot: BACH_HUMAN, O00154 Tissue specificity : Isoform 4 is expressed exclusively in brain
Orthologs for ACOT7
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ACOT7 gene from 5/9 species (see all 9
)
About this table Species with no ortholog for ACOT7 ENSEMBL Gene Tree for ACOT7 Paralogs for ACOT7 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ACOT7 gene LOC344967 2 Pseudogenes 1 related pseudogene
SNPs/Variants for ACOT7 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ACOT7 (up to first 250kb)
Disorders & Mutations for ACOT7
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602587
Medical News for ACOT7 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ACOT7 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/16 PubMed articles for ACOT7 gene (see all 16
): Purification, molecular cloning, and genomic organization of human brain long-chain acyl-CoA hydrolase. (PubMed id 10578051) 1, 2, 3, 4 Yamada J.... Suga T. (1999) Human brain acyl-CoA hydrolase isoforms encoded by a single gene. (PubMed id 12435388) 1, 3, 4 Yamada J.... Suga T. (2002) Analysis of the mouse and human acyl-CoA thioesterase (ACOT) gene clusters shows that convergent, functional evolution results in a reduced number of human peroxisomal ACOTs. (PubMed id 16940157) 2, 3 Hunt M.C....Alexson S.E. (2006) The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414) 3, 4 Gregory S.G.... Bentley D.R. (2006) A revised nomenclature for mammalian acyl-CoA thioesterases/hydrolases. (PubMed id 16103133) 2, 3 Hunt M.C....Alexson S.E. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 3, 4 Ota T....Sugano S. (2004) Aberrant cytosolic acyl-CoA thioester hydrolase in hippocampus of patients with mesial temporal lobe epilepsy. (PubMed id 15592755) 1, 3 Yang J.W....Lubec G. (2004) A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569) 3 Lim J....Zoghbi H.Y. (2006) Long-chain acyl-CoA hydrolase in the brain. (PubMed id 15731883) 3 Yamada J. (2005)
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Genome Databases showing ACOT7
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ACOT7
(According to HUGE )
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Specialized Databases showing ACOT7 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ACOT7 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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