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Aliases & Descriptions for ACCN2
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ASIC 2 ASIC1 1 , 2 , 3 ASIC1A 2 BNAC2 3 BNaC2 1 , 2 , 3 hBNaC2 1 , 2
Descriptions Acid-sensing ion channel 1 3 Brain sodium channel 2 3 Cation channel, amiloride-sensitive, neuronal, 2 2 acid-sensing ion channel 1a protein 2 amiloride-sensitive cation channel 2, neuronal 2
Search outside databases for aliases for ACCN2 genePrevious GC identifers: GC12P050746 GC12P050507 GC12P050168
Summaries for ACCN2 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ACCN2 : This gene encodes a member of the degenerin/epithelial sodium channel (DEG/ENaC) superfamily. Themembers of this family are amiloride-sensitive sodium channels that contain intracellular N and Ctermini, 2 hydrophobic transmembrane regions, and a large extracellular loop, which has manycysteine residues with conserved spacing. The member encoded by this gene is expressed in most ifnot all brain neurons, and it may be an ion channel subunit; however, its function as an ionchannel remains unknown. Alternative splicing of this gene generates 2 transcript products.[provided by RefSeq] UniProtKB/Swiss-Prot: ACCN2_HUMAN, P78348 Function : Cation channel with high affinity for sodium, which is gated by extracellular protons andinhibited by the diuretic amiloride. Also permeable for Ca(2+), Li(+) and K(+). Generates abiphasic current with a fast inactivating and a slow sustained phase. Mediatesglutamate-independent Ca(2+) entry into neurons upon acidosis. This Ca(2+) overloading is toxicfor cortical neurons and may be in part responsible for ischemic brain injury. Heteromeric channelassembly seems to modulate channel properties. Functions as a postsynaptic proton receptor thatinfluences intracellular Ca(2+) concentration and calmodulin-dependent protein kinase IIphosphorylation and thereby the density of dendritic spines. Modulates activity in the circuitsunderlying innate fear (By similarity)
Gene Wiki entry for ACCN2
Genomic Location for ACCN2
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ACCN2 gene Entrez Gene cytogenetic band: 12q12 Ensembl cytogenetic band: 12q13.13 HGNC cytogenetic band: 12q12 ACCN2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 12 GeneLoc Exon Structure
GeneLoc location for GC12P048737:
(about GC identifiers )
Start:
48,737,754 bp from pter
End:
48,763,661 bp from pter
Size:
25,908 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000012.10 NT_029419.11 Proteins for ACCN2
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ACCN2_HUMAN, P78348 (See
protein sequence )Recommended Name: Amiloride-sensitive cation channel 2, neuronal Size : 528 amino acids; 59967 Da
Subunit : Homotetramer or heterotetramer with other ASIC proteins (Probable). Interacts with STOMand ACCN1 (By similarity). Interacts with PRKCABP
Subcellular location : Cell membrane; Multi-pass membrane protein (By similarity). Note=Localizes insynaptosomes at dendritic synapses of neurons. Colocalizes with DLG4 (By similarity)
Miscellaneous : Potentiated by Ca(2+), Mg(2+), Ba(2+) and multivalent cations. Inhibited byanti-inflammatory drugs like salicylic acid (By similarity). Potentiated by FMRFamide-relatedneuropeptides. PH dependence may be regulated by serine proteases
Secondary accessions : P78349 Q96CV2Alternative splicing : 2 isoforms : P78348-2 P78348-1 (The splice variant from ASIC1a described in mouse and rat, which gives rise to an isoform with different N-termini (Asic1b), does not seem to exist in human)
Post-translational modifications:
Phosphorylation by PKA regulates interaction with PRKCABP and subcellular location. Phosphorylationby PKC may regulate the channel1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001086.2 NP_064423.2 ENSEMBL proteins: ENSP00000228468 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ACCN2: Assays for ACCN2:
Protein
Domains/ Families for ACCN2(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P78348 ProtoNet protein and cluster: P78348
1 Blocks protein family : IPB001873 Na+ channel UniProtKB/Swiss-Prot: ACCN2_HUMAN, P78348 Similarity : Belongs to the amiloride-sensitive sodium channel family
Gene Function for ACCN2
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_020039 Applied Biosystems Silencer ® siRNAs for ACCN2 Sigma-Aldrich siRNA and siRNA Panels for ACCN2 Sigma-Aldrich shRNA for ACCN2 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001095                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001095                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001095  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_020039 UniProtKB/Swiss-Prot: ACCN2_HUMAN, P78348 Function : Cation channel with high affinity for sodium, which is gated by extracellular protons andinhibited by the diuretic amiloride. Also permeable for Ca(2+), Li(+) and K(+). Generates abiphasic current with a fast inactivating and a slow sustained phase. Mediatesglutamate-independent Ca(2+) entry into neurons upon acidosis. This Ca(2+) overloading is toxicfor cortical neurons and may be in part responsible for ischemic brain injury. Heteromeric channelassembly seems to modulate channel properties. Functions as a postsynaptic proton receptor thatinfluences intracellular Ca(2+) concentration and calmodulin-dependent protein kinase IIphosphorylation and thereby the density of dendritic spines. Modulates activity in the circuitsunderlying innate fear (By similarity)
Genatlas biochemistry entry for ACCN2 :neuronal amiloride-sensitive cation (sodium) channel 2,expressed in brain,with two alternativelyspliced isoforms
2 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Accn2) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ACCN2
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for ACCN2 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ACCN2 5 Interacting proteins for ACCN2 (ENSP00000228468 3 P78348 1 ) via UniProtKB, MINT, and/or STRING About this table 5 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for ACCN2 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Enzo Life Sciences drugs & compounds for ACCN2
Sigma-Aldrich Small Molecules for ACCN2:Inhibitor
Browse Tocris compounds for ACCN2 4 Novoseek chemical compound relationships for ACCN2 gene
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Transcripts for ACCN2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_020039 Sigma-Aldrich siRNA and siRNA Panels for ACCN2 Sigma-Aldrich shRNA for ACCN2 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001095 NM_020039
REFSEQ mRNAs for ACCN2 gene (2 alternative transcripts): NM_001095.2 NM_020039.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001095 NM_020039
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001095                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001095                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001095  
Additional cDNA sequence: AK290010.1 AK293960.1 BC013891.2 BC028722.1 EU078959.1 U78180.1 U78181.1
4 DOTS entries : DT.95370218 DT.100746318 DT.99990143 DT.99938511
24/80 AceView cDNA sequences (see all 80
):Z40887 AI017398 AA442173 AI700050 AA322505 NM_020039 BC013891 BX115078 BG152517 NM_001095 AI336677 T06197 BF514399 BM726148 BM697220 AI553866 AW451342 AI762424 AW960463 BU634532 AV728855 BM930686 AW453079 BF347574
highest scoring ESTs for ACCN2 :U78181 AA328056 AA364240 AA442069 AA442173 AA706443 AI017398 AI336677 AI620655 AI700050
Unigene Cluster for ACCN2: Amiloride-sensitive cation channel 2, neuronal Hs.274361 [show with all ESTs ] Unigene Representative Sequence: NM_020039 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for ACCN2 ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12 ^ 13 SP1 :       -                     -         SP2 :       -                             SP3 :                                   SP4 :                                  
About this scheme ECgene alternative splicing isoforms for ACCN2 1 Ensembl transcript including schematic representation : ENST00000228468
Expression for ACCN2
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ACCN2 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ACCN2 1 / 2 / 3
5 probe-sets matching ACCN2 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CCTAGCCTGCSOURCE GeneReport for Unigene cluster: Hs.274361 Expression variation in blood from EXPOLDB for ACCN2
UniProtKB/Swiss-Prot: ACCN2_HUMAN, P78348 Tissue specificity : Expressed in most or all neurons
Orthologs for ACCN2
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ACCN2 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for ACCN2 ENSEMBL Gene Tree for ACCN2 Paralogs for ACCN2 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ACCN2 gene ACCN1 2 ACCN3 2
SNPs/Variants for ACCN2 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ACCN2 (up to first 250kb)
Disorders & Mutations for ACCN2
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 602866 7 Novoseek disease relationships for ACCN2 gene
About this table Human Genome Epidemiology Navigator: ACCN2 (2 documents)
Medical News for ACCN2 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ACCN2 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/83 PubMed articles for ACCN2 gene (see all 83
): BNaC1 and BNaC2 constitute a new family of human neuronal sodium channels related to degenerins and epithelial sodium channels. (PubMed id 9037075) 1, 2, 3, 4 Garcia-Anoveros J....Corey D.P. (1997) Protein kinase C isoform antagonism controls BNaC2 (ASIC1) function. (PubMed id 12244121) 1, 3, 4 Berdiev B.K.... Benos D.J. (2002) cAMP-dependent protein kinase phosphorylation of the acid-sensing ion channel-1 regulates its binding to the protein interacting with C- kinase-1. (PubMed id 12578970) 1, 3, 4 Leonard A.S.... Welsh M.J. (2003) Neuropeptide FF and FMRFamide potentiate acid-evoked currents from sensory neurons and proton-gated DEG/ENaC channels. (PubMed id 10798398) 1, 3, 4 Askwith C.C.... Welsh M.J. (2000) Selective regulation of acid-sensing ion channel 1 by serine proteases. (PubMed id 15247234) 3, 4 Poirot O.... Kellenberger S. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Interaction of the synaptic protein PICK1 (protein interacting with C kinase 1) with the non-voltage gated sodium channels BNC1 (brain Na+ channel 1) and ASIC (acid-sensing ion channel). (PubMed id 11802773) 3, 4 Hruska-Hageman A.M.... Welsh M.J. (2002) Lack of association between the amiloride-sensitive cation channel 2 (ACCN2) gene and anxiety spectrum disorders. (PubMed id 18349698) 1, 3 Hettema J.M....Chen X. (2008) Overexpression of acid-sensing ion channel 1a in transgenic mice increases acquired fear-related behavior. (PubMed id 14988500) 1, 3 Wemmie J.A....Welsh M.J. (2004) The acid-sensitive ionic channel subunit ASIC and the mammalian degenerin MDEG form a heteromultimeric H+-gated Na+ channel with novel properties. (PubMed id 9360943) 1, 3 Bassilana F....Lazdunski M. (1997)
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Genome Databases showing ACCN2
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ACCN2
(According to HUGE )
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Specialized Databases showing ACCN2 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ACCN2 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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