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Aliases for ACBD3-AS1 Gene

Subcategory (RNA class) for ACBD3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ACBD3-AS1 Gene

  • ACBD3 Antisense RNA 1 2 3 5

External Ids for ACBD3-AS1 Gene

Previous GeneCards Identifiers for ACBD3-AS1 Gene

  • GC01U905666

Summaries for ACBD3-AS1 Gene

GeneCards Summary for ACBD3-AS1 Gene

ACBD3-AS1 (ACBD3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACBD3-AS1 Gene

Genomics for ACBD3-AS1 Gene

Regulatory Elements for ACBD3-AS1 Gene

Enhancers for ACBD3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G225995 1.9 FANTOM5 ENCODE dbSUPER 30 -147.7 -147706 8.8 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 ZNF263 SP3 ACBD3 ACBD3-AS1 H3F3A SDE2 TMEM63A GC01M225948
GH01G226060 1.4 ENCODE dbSUPER 30.9 -84.7 -84702 5.6 CREB3L1 AGO1 ZFP64 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC ZNF610 ACBD3 ACBD3-AS1 SDE2 MIXL1 H3F3A ENSG00000272562 GC01P226072
GH01G225459 2.1 FANTOM5 Ensembl ENCODE dbSUPER 20.1 -683.5 -683481 9.5 ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 MEF2D LBR ACBD3 ACBD3-AS1 LOC105373110 LINC01703 ENSG00000255835 PYCR2 LEFTY2 ENSG00000248322 SDE2
GH01G226121 1.7 Ensembl ENCODE dbSUPER 24.3 -24.4 -24402 5.2 CREB3L1 MLX AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 ZFP41 H3F3A ACBD3-AS1 LINC01703 ACBD3 MIXL1 SDE2 LIN9 ENSG00000270598 GC01P226093
GH01G225809 1.7 Ensembl ENCODE dbSUPER 20.2 -335.7 -335664 5.7 CREB3L1 MLX DMAP1 FEZF1 YY1 SLC30A9 ZNF416 ZNF548 ZNF263 SP3 ACBD3 ACBD3-AS1 ENSG00000255835 PYCR2 LEFTY2 ENSG00000248322 SDE2 LEFTY3 EPHX1 SRP9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ACBD3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ACBD3-AS1 Gene

Chromosome:
1
Start:
226,148,003 bp from pter
End:
226,155,071 bp from pter
Size:
7,069 bases
Orientation:
Plus strand

Genomic View for ACBD3-AS1 Gene

Genes around ACBD3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACBD3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACBD3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ACBD3-AS1 Gene

Proteins for ACBD3-AS1 Gene

Post-translational modifications for ACBD3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACBD3-AS1 Gene

Domains & Families for ACBD3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACBD3-AS1 Gene

Function for ACBD3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACBD3-AS1 Gene

Localization for ACBD3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ACBD3-AS1 Gene

Pathways & Interactions for ACBD3-AS1 Gene

SuperPathways for ACBD3-AS1 Gene

No Data Available

Interacting Proteins for ACBD3-AS1 Gene

Gene Ontology (GO) - Biological Process for ACBD3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ACBD3-AS1 Gene

Drugs & Compounds for ACBD3-AS1 Gene

No Compound Related Data Available

Transcripts for ACBD3-AS1 Gene

mRNA/cDNA for ACBD3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ACBD3-AS1 Gene

No ASD Table

Relevant External Links for ACBD3-AS1 Gene

GeneLoc Exon Structure for
ACBD3-AS1
ECgene alternative splicing isoforms for
ACBD3-AS1

Expression for ACBD3-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACBD3-AS1 Gene

Orthologs for ACBD3-AS1 Gene

Evolution for ACBD3-AS1 Gene

ENSEMBL:
Gene Tree for ACBD3-AS1 (if available)
TreeFam:
Gene Tree for ACBD3-AS1 (if available)

No data available for Orthologs for ACBD3-AS1 Gene

Paralogs for ACBD3-AS1 Gene

No data available for Paralogs for ACBD3-AS1 Gene

Variants for ACBD3-AS1 Gene

Sequence variations from dbSNP and Humsavar for ACBD3-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000828870 -- 226,154,476(+) TACAC(C/T)GGTCT intron-variant
rs1000833370 -- 226,152,002(+) ACTCT(A/G)TCTCA intron-variant
rs1001456428 -- 226,147,937(+) TTGTT(-/TTTG)TTTGT intron-variant, nc-transcript-variant
rs1002315050 -- 226,148,954(+) TATGA(C/T)TAGGA intron-variant
rs1002442787 -- 226,151,496(+) CCCAA(G/T)TTTGT intron-variant

Relevant External Links for ACBD3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ACBD3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACBD3-AS1 Gene

Disorders for ACBD3-AS1 Gene

No disorders were found for ACBD3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACBD3-AS1 Gene

Publications for ACBD3-AS1 Gene

No publications were found for ACBD3-AS1 Gene.

Products for ACBD3-AS1 Gene

Sources for ACBD3-AS1 Gene

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