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Aliases for ACAP2-IT1 Gene

Subcategory (RNA class) for ACAP2-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ACAP2-IT1 Gene

  • ACAP2 Intronic Transcript 1 2 3 5
  • ACAP2 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ACAP2-IT1 Gene

Previous GeneCards Identifiers for ACAP2-IT1 Gene

  • GC00U933750
  • GC03M195002

Summaries for ACAP2-IT1 Gene

GeneCards Summary for ACAP2-IT1 Gene

ACAP2-IT1 (ACAP2 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ACAP2-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ACAP2-IT1 Gene

Genomics for ACAP2-IT1 Gene

Regulatory Elements for ACAP2-IT1 Gene

Enhancers for ACAP2-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H194319 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +960.4 960360 4.9 PKNOX1 ATF1 FOXA2 MLX ZFP64 ARID4B SIN3A SLC30A9 CBX5 FOS LSG1 ACAP2-IT1 HES1 LINC00887 GC03P194344 GC03P194345 GC03P194346 GC03P194347 PIR54267 GC03P194349
GH03H194328 1.5 FANTOM5 Ensembl ENCODE 9.8 +954.6 954641 0.6 HDGF ZNF473 ARNT NSD2 ZNF2 EGR1 ZNF207 FOS RUNX3 EGR2 LSG1 OPA1-AS1 ENSG00000229964 ENSG00000233987 LINC01972 ENSG00000238031 LRRC15 ACAP2-IT1 PIR54267 GC03P194342
GH03H196079 1.4 ENCODE dbSUPER 9.8 -798.2 -798241 4.4 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B UBXN7 SDHAP1 SDHAP2 ACAP2 SENP5 UBXN7-AS1 ENSG00000230732 MUC4 LINC00969 ENSG00000260261
GH03H196055 1.1 ENCODE 9.8 -773.1 -773098 1.4 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B DMAP1 YY1 SLC30A9 FOS SENP5 ENSG00000237418 ACAP2-IT1 MUC20 LINC00969 SDHAP1 SDHAP2 GC03M196053 PIR52447
GH03H194333 0.9 ENCODE 9.8 +955.0 954985 0 HDGF ZNF473 ARNT NSD2 NFXL1 ZNF2 EGR1 ZNF207 RUNX3 EGR2 LSG1 OPA1-AS1 ENSG00000229964 ENSG00000233987 LINC01972 ENSG00000238031 ACAP2-IT1 GC03P194343 GC03P194349 LINC00887
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ACAP2-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ACAP2-IT1 Gene

Genomic Locations for ACAP2-IT1 Gene
2,019 bases
Minus strand

Genomic View for ACAP2-IT1 Gene

Genes around ACAP2-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ACAP2-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ACAP2-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ACAP2-IT1 Gene

Proteins for ACAP2-IT1 Gene

Post-translational modifications for ACAP2-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ACAP2-IT1 Gene

Domains & Families for ACAP2-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ACAP2-IT1 Gene

Function for ACAP2-IT1 Gene

Phenotypes From GWAS Catalog for ACAP2-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ACAP2-IT1 Gene

Localization for ACAP2-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ACAP2-IT1 Gene

Pathways & Interactions for ACAP2-IT1 Gene

SuperPathways for ACAP2-IT1 Gene

No Data Available

Interacting Proteins for ACAP2-IT1 Gene

Gene Ontology (GO) - Biological Process for ACAP2-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ACAP2-IT1 Gene

Drugs & Compounds for ACAP2-IT1 Gene

No Compound Related Data Available

Transcripts for ACAP2-IT1 Gene

mRNA/cDNA for ACAP2-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ACAP2-IT1 Gene

No ASD Table

Relevant External Links for ACAP2-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ACAP2-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ACAP2-IT1 Gene

mRNA differential expression in normal tissues according to GTEx for ACAP2-IT1 Gene

This gene is overexpressed in Brain - Cerebellum (x4.9).
genes like me logo Genes that share expression patterns with ACAP2-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ACAP2-IT1 Gene

Orthologs for ACAP2-IT1 Gene

Evolution for ACAP2-IT1 Gene

Gene Tree for ACAP2-IT1 (if available)
Gene Tree for ACAP2-IT1 (if available)

No data available for Orthologs for ACAP2-IT1 Gene

Paralogs for ACAP2-IT1 Gene

No data available for Paralogs for ACAP2-IT1 Gene

Variants for ACAP2-IT1 Gene

Relevant External Links for ACAP2-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ACAP2-IT1 Gene

Disorders for ACAP2-IT1 Gene

No disorders were found for ACAP2-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ACAP2-IT1 Gene

Publications for ACAP2-IT1 Gene

No publications were found for ACAP2-IT1 Gene.

Products for ACAP2-IT1 Gene

Sources for ACAP2-IT1 Gene

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